Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0088
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 46 3e-05
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 46 3e-05
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 46 3e-05
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 35 0.068
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 35 0.068
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 35 0.068
Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical pr... 33 0.27
AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protei... 33 0.27
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 32 0.48
U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila disc... 31 0.63
AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein... 31 0.63
AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like pr... 31 0.63
Z81096-1|CAB03161.3| 478|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z69661-6|CAA93492.4| 299|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z70680-4|CAA94569.1| 274|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF000197-4|AAB52899.1| 274|Caenorhabditis elegans Hypothetical ... 29 3.4
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 4.4
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 4.4
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical ... 29 4.4
U41545-2|ABN43094.1| 176|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL034393-9|CAA22314.1| 248|Caenorhabditis elegans Hypothetical ... 28 7.8
>AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical
protein Y55B1BR.4 protein.
Length = 567
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +2
Query: 293 VKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESK 472
VK+V + + G+PLG T+ E G++ VARI+A A + + GD +LEV+G+ + K
Sbjct: 128 VKIVRIVR-RGEPLGATIKC-ERGKVYVARIMANGVADRSGCIQEGDRVLEVNGITVADK 185
Query: 473 EQPE 484
E E
Sbjct: 186 EPRE 189
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/60 (31%), Positives = 39/60 (65%)
Frame = +2
Query: 293 VKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESK 472
+++V +K +P+G+T+ +E G+ VARI+ G +QA + VGD + E++G+ + ++
Sbjct: 203 LRLVQFQKDTQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREINGMSVANR 262
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical
protein F17E5.1a protein.
Length = 961
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/60 (31%), Positives = 39/60 (65%)
Frame = +2
Query: 293 VKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESK 472
+++V +K +P+G+T+ +E G+ VARI+ G +QA + VGD + E++G+ + ++
Sbjct: 544 LRLVQFQKDTQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREINGMSVANR 603
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/60 (31%), Positives = 39/60 (65%)
Frame = +2
Query: 293 VKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESK 472
+++V +K +P+G+T+ +E G+ VARI+ G +QA + VGD + E++G+ + ++
Sbjct: 203 LRLVQFQKDTQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREINGMSVANR 262
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/60 (31%), Positives = 39/60 (65%)
Frame = +2
Query: 293 VKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESK 472
+++V +K +P+G+T+ +E G+ VARI+ G +QA + VGD + E++G+ + ++
Sbjct: 544 LRLVQFQKDTQEPMGITLKVNEDGRCFVARIMHGGMIHRQATLHVGDEIREINGMSVANR 603
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT-----TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIE 466
V L + P LG+TV +E G + V ++ SAA+ ++ V D++LEV+G +E
Sbjct: 491 VALHRDPALGLGITVAGYVHKKEEIGGIFVKSLVPRSAASSSGVIKVHDLILEVNGTTLE 550
Score = 29.1 bits (62), Expect = 3.4
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT--TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESKE 475
+ L K G+ LG+++ +E G + V+ I+ G A + GD +LEV+G +
Sbjct: 2041 IDLVKKTGRGLGISIVGRKNEPG-VYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCM 2099
Query: 476 QPE-GSCCKTQ*RVTLKVGLP*GKELSTNK*VNLLCKNTGRLLPNSKTP 619
Q + + KT +T KV L G+ T N + T L ++ TP
Sbjct: 2100 QEDVAAMLKT---ITGKVHLKLGRWKITET-ANRVHAATQALAKSATTP 2144
>Z46795-6|CAE48511.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT-----TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIE 466
V L + P LG+TV +E G + V ++ SAA+ ++ V D++LEV+G +E
Sbjct: 513 VALHRDPALGLGITVAGYVHKKEEIGGIFVKSLVPRSAASSSGVIKVHDLILEVNGTTLE 572
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT-----TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIE 466
V L + P LG+TV +E G + V ++ SAA+ ++ V D++LEV+G +E
Sbjct: 513 VALHRDPALGLGITVAGYVHKKEEIGGIFVKSLVPRSAASSSGVIKVHDLILEVNGTTLE 572
Score = 29.1 bits (62), Expect = 3.4
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT--TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESKE 475
+ L K G+ LG+++ +E G + V+ I+ G A + GD +LEV+G +
Sbjct: 2063 IDLVKKTGRGLGISIVGRKNEPG-VYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCM 2121
Query: 476 QPE-GSCCKTQ*RVTLKVGLP*GKELSTNK*VNLLCKNTGRLLPNSKTP 619
Q + + KT +T KV L G+ T N + T L ++ TP
Sbjct: 2122 QEDVAAMLKT---ITGKVHLKLGRWKITET-ANRVHAATQALAKSATTP 2166
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT-----TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIE 466
V L + P LG+TV +E G + V ++ SAA+ ++ V D++LEV+G +E
Sbjct: 304 VALHRDPALGLGITVAGYVHKKEEIGGIFVKSLVPRSAASSSGVIKVHDLILEVNGTTLE 363
Score = 29.1 bits (62), Expect = 3.4
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT--TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESKE 475
+ L K G+ LG+++ +E G + V+ I+ G A + GD +LEV+G +
Sbjct: 1854 IDLVKKTGRGLGISIVGRKNEPG-VYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCM 1912
Query: 476 QPE-GSCCKTQ*RVTLKVGLP*GKELSTNK*VNLLCKNTGRLLPNSKTP 619
Q + + KT +T KV L G+ T N + T L ++ TP
Sbjct: 1913 QEDVAAMLKT---ITGKVHLKLGRWKITET-ANRVHAATQALAKSATTP 1957
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT-----TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIE 466
V L + P LG+TV +E G + V ++ SAA+ ++ V D++LEV+G +E
Sbjct: 611 VALHRDPALGLGITVAGYVHKKEEIGGIFVKSLVPRSAASSSGVIKVHDLILEVNGTTLE 670
Score = 29.1 bits (62), Expect = 3.4
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT--TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESKE 475
+ L K G+ LG+++ +E G + V+ I+ G A + GD +LEV+G +
Sbjct: 2161 IDLVKKTGRGLGISIVGRKNEPG-VYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCM 2219
Query: 476 QPE-GSCCKTQ*RVTLKVGLP*GKELSTNK*VNLLCKNTGRLLPNSKTP 619
Q + + KT +T KV L G+ T N + T L ++ TP
Sbjct: 2220 QEDVAAMLKT---ITGKVHLKLGRWKITET-ANRVHAATQALAKSATTP 2264
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical
protein C52A11.4f protein.
Length = 2371
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT-----TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIE 466
V L + P LG+TV +E G + V ++ SAA+ ++ V D++LEV+G +E
Sbjct: 491 VALHRDPALGLGITVAGYVHKKEEIGGIFVKSLVPRSAASSSGVIKVHDLILEVNGTTLE 550
Score = 29.1 bits (62), Expect = 3.4
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT--TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESKE 475
+ L K G+ LG+++ +E G + V+ I+ G A + GD +LEV+G +
Sbjct: 2041 IDLVKKTGRGLGISIVGRKNEPG-VYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCM 2099
Query: 476 QPE-GSCCKTQ*RVTLKVGLP*GKELSTNK*VNLLCKNTGRLLPNSKTP 619
Q + + KT +T KV L G+ T N + T L ++ TP
Sbjct: 2100 QEDVAAMLKT---ITGKVHLKLGRWKITET-ANRVHAATQALAKSATTP 2144
>Z46792-8|CAE48495.2| 838|Caenorhabditis elegans Hypothetical
protein C52A11.4b protein.
Length = 838
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT-----TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIE 466
V L + P LG+TV +E G + V ++ SAA+ ++ V D++LEV+G +E
Sbjct: 513 VALHRDPALGLGITVAGYVHKKEEIGGIFVKSLVPRSAASSSGVIKVHDLILEVNGTTLE 572
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical
protein C52A11.4a protein.
Length = 2393
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT-----TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIE 466
V L + P LG+TV +E G + V ++ SAA+ ++ V D++LEV+G +E
Sbjct: 513 VALHRDPALGLGITVAGYVHKKEEIGGIFVKSLVPRSAASSSGVIKVHDLILEVNGTTLE 572
Score = 29.1 bits (62), Expect = 3.4
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT--TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESKE 475
+ L K G+ LG+++ +E G + V+ I+ G A + GD +LEV+G +
Sbjct: 2063 IDLVKKTGRGLGISIVGRKNEPG-VYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCM 2121
Query: 476 QPE-GSCCKTQ*RVTLKVGLP*GKELSTNK*VNLLCKNTGRLLPNSKTP 619
Q + + KT +T KV L G+ T N + T L ++ TP
Sbjct: 2122 QEDVAAMLKT---ITGKVHLKLGRWKITET-ANRVHAATQALAKSATTP 2166
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical
protein C52A11.4e protein.
Length = 2184
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT-----TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIE 466
V L + P LG+TV +E G + V ++ SAA+ ++ V D++LEV+G +E
Sbjct: 304 VALHRDPALGLGITVAGYVHKKEEIGGIFVKSLVPRSAASSSGVIKVHDLILEVNGTTLE 363
Score = 29.1 bits (62), Expect = 3.4
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT--TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESKE 475
+ L K G+ LG+++ +E G + V+ I+ G A + GD +LEV+G +
Sbjct: 1854 IDLVKKTGRGLGISIVGRKNEPG-VYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCM 1912
Query: 476 QPE-GSCCKTQ*RVTLKVGLP*GKELSTNK*VNLLCKNTGRLLPNSKTP 619
Q + + KT +T KV L G+ T N + T L ++ TP
Sbjct: 1913 QEDVAAMLKT---ITGKVHLKLGRWKITET-ANRVHAATQALAKSATTP 1957
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
protein C52A11.4d protein.
Length = 2491
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT-----TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIE 466
V L + P LG+TV +E G + V ++ SAA+ ++ V D++LEV+G +E
Sbjct: 611 VALHRDPALGLGITVAGYVHKKEEIGGIFVKSLVPRSAASSSGVIKVHDLILEVNGTTLE 670
Score = 29.1 bits (62), Expect = 3.4
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT--TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESKE 475
+ L K G+ LG+++ +E G + V+ I+ G A + GD +LEV+G +
Sbjct: 2161 IDLVKKTGRGLGISIVGRKNEPG-VYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCM 2219
Query: 476 QPE-GSCCKTQ*RVTLKVGLP*GKELSTNK*VNLLCKNTGRLLPNSKTP 619
Q + + KT +T KV L G+ T N + T L ++ TP
Sbjct: 2220 QEDVAAMLKT---ITGKVHLKLGRWKITET-ANRVHAATQALAKSATTP 2264
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical
protein C52A11.4c protein.
Length = 2202
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT-----TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIE 466
V L + P LG+TV +E G + V ++ SAA+ ++ V D++LEV+G +E
Sbjct: 322 VALHRDPALGLGITVAGYVHKKEEIGGIFVKSLVPRSAASSSGVIKVHDLILEVNGTTLE 381
Score = 29.1 bits (62), Expect = 3.4
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT--TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESKE 475
+ L K G+ LG+++ +E G + V+ I+ G A + GD +LEV+G +
Sbjct: 1872 IDLVKKTGRGLGISIVGRKNEPG-VYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCM 1930
Query: 476 QPE-GSCCKTQ*RVTLKVGLP*GKELSTNK*VNLLCKNTGRLLPNSKTP 619
Q + + KT +T KV L G+ T N + T L ++ TP
Sbjct: 1931 QEDVAAMLKT---ITGKVHLKLGRWKITET-ANRVHAATQALAKSATTP 1975
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT-----TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIE 466
V L + P LG+TV +E G + V ++ SAA+ ++ V D++LEV+G +E
Sbjct: 282 VALHRDPALGLGITVAGYVHKKEEIGGIFVKSLVPRSAASSSGVIKVHDLILEVNGTTLE 341
Score = 29.5 bits (63), Expect = 2.5
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +2
Query: 302 VGLRKVPGQPLGLTVT--TDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESKE 475
+ L K G+ LG+++ +E G + V+ I+ G A + GD +LEV+G +
Sbjct: 1832 IDLVKKTGRGLGISIVGRKNEPG-VYVSEIVKGGLAESDGRLMTGDQILEVNGKDVRGCM 1890
Query: 476 QPE-GSCCKTQ*RVTLKVGLP*GKELSTNK*VNLLCKNTGRLLPNSKTPLI 625
Q + + KT +T KV L G+ T N + T L ++ TP +
Sbjct: 1891 QEDVAAMLKT---ITGKVHLKLGRWKITET-ANRVHAATQALAKSATTPRV 1937
>Z81466-2|CAC42256.1| 954|Caenorhabditis elegans Hypothetical
protein C09H6.2b protein.
Length = 954
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 287 ETVKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAG----SAAAKQALVSVGDVLLEVDG 454
ET K V + K G+PLG+ V G ++ +LA AA +++GD ++ ++G
Sbjct: 769 ETQKEVVVPKKAGEPLGIVVVESGWGSMLPTVVLAHMNPVGPAAHSNKLNIGDQIINING 828
Query: 455 VHI 463
+ +
Sbjct: 829 ISL 831
>Z81466-1|CAB03869.1| 982|Caenorhabditis elegans Hypothetical
protein C09H6.2a protein.
Length = 982
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 287 ETVKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAG----SAAAKQALVSVGDVLLEVDG 454
ET K V + K G+PLG+ V G ++ +LA AA +++GD ++ ++G
Sbjct: 797 ETQKEVVVPKKAGEPLGIVVVESGWGSMLPTVVLAHMNPVGPAAHSNKLNIGDQIINING 856
Query: 455 VHI 463
+ +
Sbjct: 857 ISL 859
>AJ133374-1|CAB40208.1| 954|Caenorhabditis elegans lin-10 protein
protein.
Length = 954
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 287 ETVKVVGLRKVPGQPLGLTVTTDEHGQLIVARILAG----SAAAKQALVSVGDVLLEVDG 454
ET K V + K G+PLG+ V G ++ +LA AA +++GD ++ ++G
Sbjct: 769 ETQKEVVVPKKAGEPLGIVVVESGWGSMLPTVVLAHMNPVGPAAHSNKLNIGDQIINING 828
Query: 455 VHI 463
+ +
Sbjct: 829 ISL 831
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 31.9 bits (69), Expect = 0.48
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 403 CCTSCKYPCNNKLSMLIGCHSQT*RLSWYFSKT 305
CC S + CN +S GC T R W++ K+
Sbjct: 458 CCPSSENACNANMSRGNGCKGSTQRSMWFYDKS 490
>U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila discs
large homologprotein 1, isoform a protein.
Length = 967
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 317 VPGQP-LGLTVTTDEHGQLI-VARILAGSAAAKQALVSVGDVLLEVDGVHIESKEQPEGS 490
V GQ LG + E + I ++ +L G A V GDVLLEV+GV + + E +
Sbjct: 514 VKGQNGLGFNIVGGEDNEPIYISFVLPGGVADLSGNVKTGDVLLEVNGVVLRNATHKEAA 573
>AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein
DLG-1 protein.
Length = 967
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 317 VPGQP-LGLTVTTDEHGQLI-VARILAGSAAAKQALVSVGDVLLEVDGVHIESKEQPEGS 490
V GQ LG + E + I ++ +L G A V GDVLLEV+GV + + E +
Sbjct: 514 VKGQNGLGFNIVGGEDNEPIYISFVLPGGVADLSGNVKTGDVLLEVNGVVLRNATHKEAA 573
>AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like
protein DLG-1 protein.
Length = 967
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 317 VPGQP-LGLTVTTDEHGQLI-VARILAGSAAAKQALVSVGDVLLEVDGVHIESKEQPEGS 490
V GQ LG + E + I ++ +L G A V GDVLLEV+GV + + E +
Sbjct: 514 VKGQNGLGFNIVGGEDNEPIYISFVLPGGVADLSGNVKTGDVLLEVNGVVLRNATHKEAA 573
>Z81096-1|CAB03161.3| 478|Caenorhabditis elegans Hypothetical
protein K03H4.1 protein.
Length = 478
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +3
Query: 45 VNIIRSLSEYRGNNIRTIEQAELAIIVSRAHFKALIEAHDQIGKIWLERGSGIDDKLIPN 224
+ IIR +S +RG +R + E ++V A A+++ + ++ + D+ PN
Sbjct: 157 IQIIRLISFHRGLKLRRLYDPEFNVVVDDADLLAMMKLYQEL--------RNLSDQ--PN 206
Query: 225 EFPDLIEFSKRV 260
EF DL++ V
Sbjct: 207 EFQDLMKVKVNV 218
>Z69661-6|CAA93492.4| 299|Caenorhabditis elegans Hypothetical
protein F48F7.2 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.5
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +3
Query: 60 SLSEYRGN--NIRTIEQAELAIIVSRAHFKALIEAHDQIGKIWLERGSGIDDKLIPNEFP 233
+++ RG +R +Q LA+ ++ K ++E +QIG I R +G KL+
Sbjct: 43 AIASVRGEIEKLRRDQQHVLALTIADPRDKNILE--NQIGTI--RRRTGDLRKLVRQAED 98
Query: 234 DLIEFSKRVPRVTAICL*KQ*KL*VLEKYQDNL 332
D +EF+K+V VT K+ + LE +DNL
Sbjct: 99 DFLEFTKQVQSVTE----KRMRQNQLELLKDNL 127
>Z70680-4|CAA94569.1| 274|Caenorhabditis elegans Hypothetical
protein C25G4.6 protein.
Length = 274
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2
Query: 323 GQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESKE 475
G LGL + ++ +++V+R+ GS A K LV +GD L +VDG+ + K+
Sbjct: 120 GPKLGLGIKHFQN-RVLVSRVDPGSLAEK-CLV-LGDHLCDVDGIPVSDKD 167
>AF000197-4|AAB52899.1| 274|Caenorhabditis elegans Hypothetical
protein T21G5.4 protein.
Length = 274
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2
Query: 323 GQPLGLTVTTDEHGQLIVARILAGSAAAKQALVSVGDVLLEVDGVHIESKE 475
G LGL + ++ +++V+R+ GS A K LV +GD L +VDG+ + K+
Sbjct: 120 GPKLGLGIKHFQN-RVLVSRVDPGSLAEK-CLV-LGDHLCDVDGIPVSDKD 167
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 39 GNVNIIRSLSEYRGNNIRTIEQAELAIIVSR--AHFKALIEAHDQIGKIWLERGSGID 206
G++ I+ ++ +Y N E+ + + + R A +A +E H + K+ L RG+ D
Sbjct: 359 GHIKIVTAIMDYYEKNPPQTEEEKQELCLERYSALMEAAMEGHIDVCKLMLSRGTPAD 416
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 39 GNVNIIRSLSEYRGNNIRTIEQAELAIIVSR--AHFKALIEAHDQIGKIWLERGSGID 206
G++ I+ ++ +Y N E+ + + + R A +A +E H + K+ L RG+ D
Sbjct: 359 GHIKIVTAIMDYYEKNPPQTEEEKQELCLERYSALMEAAMEGHIDVCKLMLSRGTPAD 416
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 39 GNVNIIRSLSEYRGNNIRTIEQAELAIIVSR--AHFKALIEAHDQIGKIWLERGSGID 206
G++ I+ ++ +Y N E+ + + + R A +A +E H + K+ L RG+ D
Sbjct: 359 GHIKIVTAIMDYYEKNPPQTEEEKQELCLERYSALMEAAMEGHIDVCKLMLSRGTPAD 416
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +3
Query: 39 GNVNIIRSLSEYRGNNIRTIEQAELAIIVSR--AHFKALIEAHDQIGKIWLERGSGID 206
G++ I+ ++ +Y N E+ + + + R A +A +E H + K+ L RG+ D
Sbjct: 359 GHIKIVTAIMDYYEKNPPQTEEEKQELCLERYSALMEAAMEGHIDVCKLMLSRGTPAD 416
>AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical
protein K09F6.6 protein.
Length = 1010
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 117 IIVSRAHFKALIEAHDQIGKIWLERGSGIDDKLIPNEFPDLIEFSKRVPRVTA 275
II+ HFKAL E + + W++ G + KLI + ++E + ++A
Sbjct: 711 IILGSQHFKALKENLTEEQRNWMDMGHFVMAKLIGTDEQRVLEVEASIASISA 763
>U41545-2|ABN43094.1| 176|Caenorhabditis elegans Hypothetical
protein C02F12.5 protein.
Length = 176
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/52 (23%), Positives = 21/52 (40%)
Frame = -2
Query: 412 LFCCCTSCKYPCNNKLSMLIGCHSQT*RLSWYFSKTYNFYCFYRHIAVTLGT 257
LF C+Y C+++L C WY+ F Y+++ G+
Sbjct: 10 LFLVPVLCQYACSSELKFGTACSENKTSTKWYYDSKLLFCYPYKYLGCGEGS 61
>AL034393-9|CAA22314.1| 248|Caenorhabditis elegans Hypothetical
protein Y18D10A.11 protein.
Length = 248
Score = 27.9 bits (59), Expect = 7.8
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = +3
Query: 3 SEEDLLVKPVSLGNVNIIRSLSEYRGNNIRTIEQAELAIIVSRAHFKALIEAHDQIGKIW 182
+EE LLV + G V+ +SLSE N + AE+++ + L E ++ + W
Sbjct: 102 NEELLLVLLRTEGIVDANKSLSEQLAN----AQDAEVSMTTLKETVAKLEEENNVLQATW 157
Query: 183 LERGSGIDDKLI 218
E SG+ ++LI
Sbjct: 158 AEERSGLVNELI 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,362,062
Number of Sequences: 27780
Number of extensions: 378939
Number of successful extensions: 1020
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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