Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0087
         (396 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    50   2e-05
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    37   0.16 
UniRef50_Q8SV02 Cluster: Putative uncharacterized protein ECU07_...    35   0.50 
UniRef50_A4J309 Cluster: Putative uncharacterized protein precur...    34   1.1  
UniRef50_Q4PAR0 Cluster: Putative uncharacterized protein; n=1; ...    33   1.5  
UniRef50_A4RP26 Cluster: Putative uncharacterized protein; n=1; ...    33   2.0  
UniRef50_Q08BD9 Cluster: Zgc:153909; n=4; Danio rerio|Rep: Zgc:1...    32   3.5  
UniRef50_A6W593 Cluster: Transcriptional regulator, TetR family;...    31   6.1  
UniRef50_A5EH56 Cluster: Putative uncharacterized protein; n=1; ...    31   8.1  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 49.6 bits (113), Expect = 2e-05
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = +3

Query: 3   FLLLIWVDELTAHLVLSGYWSP 68
           FLLL WVDELTAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 36.7 bits (81), Expect = 0.16
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +2

Query: 200 WYLPARTHKRSYHQ 241
           WYLPARTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_Q8SV02 Cluster: Putative uncharacterized protein
           ECU07_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
           uncharacterized protein ECU07_0900 - Encephalitozoon
           cuniculi
          Length = 372

 Score = 35.1 bits (77), Expect = 0.50
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 153 SNRNALLLHGRNRQGGGTYPRGLTRGPTTSNYRKY 257
           + RNALL+HG N  G  TY RGL    +   YR +
Sbjct: 112 TKRNALLVHGFNGSGNSTYMRGLAGHLSREGYRVF 146


>UniRef50_A4J309 Cluster: Putative uncharacterized protein
           precursor; n=1; Desulfotomaculum reducens MI-1|Rep:
           Putative uncharacterized protein precursor -
           Desulfotomaculum reducens MI-1
          Length = 131

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = +1

Query: 139 GYPTLQTETHYCFTAEIGRAVVPTRADSQEVLPPVITANIITAGFIFSFYY 291
           G PT+ +E    FT +IGR V     D++E+  P++T  I+T   +FS ++
Sbjct: 52  GLPTVTSEE---FTDKIGRIVAAIYKDAKEI-SPMLTLGIVTVCAVFSIFF 98


>UniRef50_Q4PAR0 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 560

 Score = 33.5 bits (73), Expect = 1.5
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +1

Query: 136 NGYPTLQTETHYCFTA---EIGRAVVPTRADSQEVLPPVITANIIT 264
           NGY    + +  C  A   ++GR VV +   S E+LPPV +A I+T
Sbjct: 279 NGYTLNLSASDVCTAANRSDVGRCVVTSNITSGEILPPVQSARIMT 324


>UniRef50_A4RP26 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 400

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = +1

Query: 67  HRHLQRKCATHLEI*VA--RSQYSYNGYPTLQTETHYCFTAEIGRAVVPTRADSQEVLPP 240
           H H  R C+T + +  A   S +S +G PT+Q +T    T        P  AD Q+  P 
Sbjct: 20  HHHGLRACSTCIRLTEAPDESAFSVHG-PTMQPQTASALTEIPTSTTKPAAADQQDKPPV 78

Query: 241 VITANIITAGF 273
           VIT  +  AG+
Sbjct: 79  VIT-EMAVAGY 88


>UniRef50_Q08BD9 Cluster: Zgc:153909; n=4; Danio rerio|Rep:
           Zgc:153909 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 262

 Score = 32.3 bits (70), Expect = 3.5
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = +3

Query: 114 CKVSV*LQ-RLPHPSNRNALL-LHGRNRQGGGTYPRGLTRG 230
           CKV++ ++ RL HP  R  ++ LHG+ R GGG   RG+ +G
Sbjct: 83  CKVNMNVKARLGHPVGRGGMMGLHGQMR-GGGRSRRGMVKG 122


>UniRef50_A6W593 Cluster: Transcriptional regulator, TetR family;
           n=1; Kineococcus radiotolerans SRS30216|Rep:
           Transcriptional regulator, TetR family - Kineococcus
           radiotolerans SRS30216
          Length = 222

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = +3

Query: 132 LQRLPHPSNRNALLLHGRNRQGGGTYPRGLTRG 230
           L  LP P  R A    G  R GGGT P G +RG
Sbjct: 189 LDGLPRPPGRAAGPARGTTRSGGGTRPGGGSRG 221


>UniRef50_A5EH56 Cluster: Putative uncharacterized protein; n=1;
           Bradyrhizobium sp. BTAi1|Rep: Putative uncharacterized
           protein - Bradyrhizobium sp. (strain BTAi1 / ATCC
           BAA-1182)
          Length = 164

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -1

Query: 204 YHRPAYFCREAVMRFGLKGGV 142
           Y R AYF  EAV RFG +GG+
Sbjct: 37  YRRRAYFDYEAVTRFGARGGI 57


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,808,755
Number of Sequences: 1657284
Number of extensions: 9407713
Number of successful extensions: 20552
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20549
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)