Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0081
(553 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 142 2e-35
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 79 4e-16
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 75 5e-15
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 64 1e-11
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 59 5e-10
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 55 8e-09
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 47 2e-06
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.065
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.26
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 0.80
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 0.80
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 27 1.8
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 27 1.8
SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr 1|... 27 2.4
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 26 3.2
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 4.2
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 4.2
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 5.6
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 25 7.4
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 25 7.4
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 7.4
SPBC1683.09c |frp1||ferric-chelate reductase Frp1|Schizosaccharo... 25 7.4
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 25 9.8
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 142 bits (345), Expect = 2e-35
Identities = 64/71 (90%), Positives = 69/71 (97%)
Frame = +2
Query: 44 DEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 223
+EE+AALV+DNGSGMCKAGFAGDDAP AVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 224 RGILTLKYPID 256
RGILTLKYPI+
Sbjct: 62 RGILTLKYPIE 72
Score = 125 bits (301), Expect = 5e-30
Identities = 53/64 (82%), Positives = 56/64 (87%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEA LNPK+NREKMT I+F+TFN
Sbjct: 70 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNA 129
Query: 427 PAMY 438
PA Y
Sbjct: 130 PAFY 133
Score = 46.4 bits (105), Expect = 3e-06
Identities = 23/32 (71%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIVLDS + P YEGYA
Sbjct: 139 VLSLYASGRTTGIVLDSGDGVTHTVPIYEGYA 170
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 79.0 bits (186), Expect = 4e-16
Identities = 35/65 (53%), Positives = 47/65 (72%)
Frame = +2
Query: 62 LVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 241
+ +DNGSG KAGFAGDD P +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 242 KYPID 256
+ PI+
Sbjct: 72 QRPIE 76
Score = 66.5 bits (155), Expect = 2e-12
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +1
Query: 241 QIPHRHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEASLNPKANREKMTHIMFQT 417
Q P GI+ NW DME+IW + + ++ L PEEHP+LLTE L N+EK+ ++T
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131
Query: 418 FNTPAM 435
N PA+
Sbjct: 132 LNVPAL 137
Score = 38.3 bits (85), Expect = 7e-04
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 450 KPVLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
+PVL+LYAS RTTGIVL+ + P Y+G++
Sbjct: 142 QPVLALYASARTTGIVLECGDGLTHSVPIYDGFS 175
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 75.4 bits (177), Expect = 5e-15
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P RHG + NWD ME+ W + + LR PE+H LLTE LNP NRE IMF++FN
Sbjct: 93 PIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNC 152
Query: 427 PAMY 438
+Y
Sbjct: 153 AGLY 156
Score = 42.7 bits (96), Expect = 3e-05
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +2
Query: 62 LVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVG--MGQKDSYVGDE 211
+++DNG+G K G+AG+DAP VFP+++ R G G + K SY+ +
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIA-TRSAGASSGPAVSSKPSYMASK 58
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 64.1 bits (149), Expect = 1e-11
Identities = 24/64 (37%), Positives = 42/64 (65%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P +GI+ ++++M ++W +TF+ +L++ P +LLTE +NP ANREKM MF+ +
Sbjct: 70 PMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGF 129
Query: 427 PAMY 438
+Y
Sbjct: 130 GGVY 133
Score = 63.7 bits (148), Expect = 2e-11
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = +2
Query: 50 EVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 223
E A +V+DNG+G K G+A D+ P FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 224 RGILTLKYPID 256
R +L +KYP++
Sbjct: 62 RSLLQVKYPME 72
Score = 29.1 bits (62), Expect = 0.46
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYE 542
VLSLYA G ++G+V+DS + P YE
Sbjct: 139 VLSLYAQGLSSGVVVDSGDGVTHIVPVYE 167
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 58.8 bits (136), Expect = 5e-10
Identities = 26/70 (37%), Positives = 36/70 (51%)
Frame = +1
Query: 253 RHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNTPA 432
R+G V NWD +W + +L+ P EHP+L+TE NP NR K MF++ PA
Sbjct: 70 RNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPA 129
Query: 433 MYGGHPSPCS 462
Y C+
Sbjct: 130 TYLAKQETCA 139
Score = 38.3 bits (85), Expect = 7e-04
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVG 148
+EV+A+V+D GS + GF+G+D P V PS G
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCG 42
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 54.8 bits (126), Expect = 8e-09
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P +++NWD ME++ +TF +L + EHP+ +TE NP R MT ++F+ +N
Sbjct: 86 PFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNA 144
Query: 427 PAM-YG 441
P++ YG
Sbjct: 145 PSVAYG 150
Score = 33.9 bits (74), Expect = 0.016
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 62 LVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPR 157
LV+DNGS +AG+ G+ P VF ++V R R
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYR 58
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 47.2 bits (107), Expect = 2e-06
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +1
Query: 256 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNTPAM 435
+GI+ +W+ W +L+V P E+ +++TE S NP++ R+++ F+ + PA
Sbjct: 74 NGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAF 133
Query: 436 Y 438
Y
Sbjct: 134 Y 134
Score = 38.7 bits (86), Expect = 6e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQ 58
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.065
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1
Query: 307 FYNELRVAPEEHPVLLTE--ASLNPKANREKMTHIMFQTFNTP 429
+Y L E+HP+LLT+ A+L P+ + ++ I ++ NTP
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTP 1441
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.26
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 204 PT*ESFCPI-PTITP*WRGLPTIEGNTAQGASSPAKPALHIPEPLSTTNAATSSS 43
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 0.80
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -2
Query: 207 SPT*ESFC--PIPTITP*WRGLPTIEGNTAQGASSPAKPAL 91
S T +SF P+PT P LPT NT Q P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.3 bits (60), Expect = 0.80
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 215 VPHLLHKSPSVPYRPSRPDGGAFPRSRGTR 126
+ L+ K+PS PY SRP A S TR
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 27.1 bits (57), Expect = 1.8
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +1
Query: 232 PDPQIPHRHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEASLNPKANREKMT 399
P+ P + G V +W+ ++ W H Y+ L P + +PV L + +RE T
Sbjct: 108 PNEIQPIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELAT 166
Query: 400 HIMFQTFNTP 429
F+ P
Sbjct: 167 QFFFEECQVP 176
>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 127
Score = 27.1 bits (57), Expect = 1.8
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = -1
Query: 244 FEGQDTSFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIVYY 65
F G +F CLI++IR +SH D EHG II C T L G I+YY
Sbjct: 47 FAGLGIAFIYCLIAFIRE-MSHPSSR-------KDTMEHGL-PIILCST-LMLVGNILYY 96
>SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/47 (25%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +1
Query: 244 IPHRHGIVTNWDDME-KIWH--HTFYNELRVAPEEHPVLLTEASLNP 375
+P + ++ + DD +W+ HTF+++ + P EH + ++++ +NP
Sbjct: 265 VPQGNFVIGSADDRTLNVWNLRHTFHHKGKTRPPEHRI-VSQSIINP 310
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 26.2 bits (55), Expect = 3.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 185 QKDSYVGDEAQSKRGILTLKYPIDTESSLTGMTWRRFGIIPSTMSCVS 328
+KD+ V E SK T YP + S LT + + + +SC S
Sbjct: 143 EKDNLVNSEYSSKYSSTTRIYPYHSLSQLTDLLTDGSFYVSTNISCFS 190
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 89 TYRSHCLLPTRQLLRRTS*ISEI 21
TYR H +PT LL T +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 244 FEGQDTSFALCLISYIRVLLSHTDHHA 164
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 457 CSRCTRPVVPPVSCWTPGRC 516
CS CT + P S W+ G C
Sbjct: 197 CSVCTDTINPSTSIWSCGTC 216
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 7.4
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -2
Query: 231 IPLLLCASSPT*ESFCPIPTI-TP*WRGLPTIEGNTAQGASSPAKPALHIPEPLSTTNAA 55
IP L ++P +F P P++ +P + T +TA ++SP L P + TN +
Sbjct: 363 IPSPLQNTNPAPSTF-PNPSVASPAFPNSSTSNPSTAPASASPLASTLK-PSTANDTNGS 420
Query: 54 TSSS 43
+SSS
Sbjct: 421 SSSS 424
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2
Query: 144 TIEGNTAQGASSPAKPALHIPEPLSTT 64
T EG AQ P P LHIP P TT
Sbjct: 31 TFEG--AQPQWEPPIPGLHIPPPPGTT 55
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 490 PVVRPDAYSESTGLDGHRTWRA 425
P P A S+ T +DGHR A
Sbjct: 384 PKAAPKAVSQKTNVDGHRNHEA 405
>SPBC1683.09c |frp1||ferric-chelate reductase
Frp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 564
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 167 VMVGMGQKDSYVGDEAQSKRGILTLKYPI 253
+M+G +Y+G AQ KR +LT + I
Sbjct: 165 IMIGAIHGFAYIGLAAQGKRALLTARVTI 193
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 62 LVVDNGSGMCKAGFAG 109
+V+DNG+ KAGFAG
Sbjct: 8 IVLDNGAYHIKAGFAG 23
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,674,445
Number of Sequences: 5004
Number of extensions: 61500
Number of successful extensions: 179
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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