Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0081
(553 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 151 5e-37
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 1e-35
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 1e-35
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 3e-35
SB_56| Best HMM Match : Actin (HMM E-Value=0) 144 3e-35
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 143 7e-35
SB_54| Best HMM Match : Actin (HMM E-Value=0) 69 2e-12
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 6e-12
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 58 6e-09
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 57 8e-09
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 54 8e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 54 8e-08
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 45 4e-05
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 43 1e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.1
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 1.4
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 1.4
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 1.4
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.4
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 30 1.4
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.4
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 1.9
SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05) 29 1.9
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_42341| Best HMM Match : DUF701 (HMM E-Value=3) 29 3.3
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 28 4.4
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_30821| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094) 28 5.8
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 27 7.7
SB_41722| Best HMM Match : Extensin_2 (HMM E-Value=0.35) 27 7.7
SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13) 27 7.7
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 27 7.7
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 7.7
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1) 27 7.7
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 27 7.7
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 27 7.7
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 27 7.7
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 7.7
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 151 bits (365), Expect = 5e-37
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
MCD++VAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 134 bits (324), Expect = 5e-32
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 427 PAMY 438
PAMY
Sbjct: 131 PAMY 134
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIV+DS + P YEGYA
Sbjct: 140 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 171
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 146 bits (354), Expect = 1e-35
Identities = 68/73 (93%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
M D+E+AALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 134 bits (324), Expect = 5e-32
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 427 PAMY 438
PAMY
Sbjct: 131 PAMY 134
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIV+DS + P YEGYA
Sbjct: 140 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 171
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 146 bits (354), Expect = 1e-35
Identities = 66/73 (90%), Positives = 71/73 (97%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
M D+++AALV+DNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 134 bits (324), Expect = 5e-32
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 427 PAMY 438
PAMY
Sbjct: 131 PAMY 134
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/34 (64%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYE--GYA 551
VLSLYASGRTTGIV+DS S P YE GY+
Sbjct: 140 VLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 144 bits (350), Expect = 3e-35
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = +2
Query: 44 DEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 223
D++VAALV+DNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 224 RGILTLKYPID 256
RGILTLKYPI+
Sbjct: 62 RGILTLKYPIE 72
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIV+DS + P YEGYA
Sbjct: 102 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 133
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTF 309
P HGIVTNWDDMEKI TF
Sbjct: 70 PIEHGIVTNWDDMEKIMFETF 90
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 382 NREKMTHIMFQTFNTPAMY 438
N + M IMF+TFN+PAMY
Sbjct: 78 NWDDMEKIMFETFNSPAMY 96
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 144 bits (350), Expect = 3e-35
Identities = 67/71 (94%), Positives = 70/71 (98%)
Frame = +2
Query: 44 DEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 223
++EVAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 224 RGILTLKYPID 256
RGILTLKYPI+
Sbjct: 62 RGILTLKYPIE 72
Score = 134 bits (324), Expect = 5e-32
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFN+
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129
Query: 427 PAMY 438
PAMY
Sbjct: 130 PAMY 133
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIV+DS + P YEGYA
Sbjct: 139 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 170
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 143 bits (347), Expect = 7e-35
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = +2
Query: 44 DEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 223
+++VAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 224 RGILTLKYPID 256
RGILTLKYPI+
Sbjct: 62 RGILTLKYPIE 72
Score = 134 bits (324), Expect = 5e-32
Identities = 58/64 (90%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFN+
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129
Query: 427 PAMY 438
PAMY
Sbjct: 130 PAMY 133
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIV+DS + P YEGYA
Sbjct: 139 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 170
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/50 (60%), Positives = 38/50 (76%)
Frame = +1
Query: 289 KIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNTPAMY 438
K+W H F ++LRV E+ PVLLTEA LNPK NRE+M +MF++FN P MY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMY 2178
Score = 56.4 bits (130), Expect = 1e-08
Identities = 22/34 (64%), Positives = 29/34 (85%)
Frame = +2
Query: 62 LVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQ 163
+V+DNGSG CKAG + D++P VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 36.7 bits (81), Expect = 0.013
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGY 548
V++LYASGRTTG V D S P Y+GY
Sbjct: 2184 VMALYASGRTTGTVFDCGDGVSHTVPVYDGY 2214
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 67.7 bits (158), Expect = 6e-12
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +1
Query: 220 QKRYP-DPQIPHRHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEASLNPKANREK 393
Q RY + P +GIV NWDDM+ +W +TF +++ + P VLLTE LNP NREK
Sbjct: 63 QLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREK 122
Query: 394 MTHIMFQTFNTPAMY 438
M +MF+ + +Y
Sbjct: 123 MIEVMFENYQFEGVY 137
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +2
Query: 56 AALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 229
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 230 ILTLKYPID 256
+L + YP+D
Sbjct: 67 MLEVNYPMD 75
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VL+LYA G TG+V+DS + CP YEG+A
Sbjct: 143 VLTLYAQGLLTGVVIDSGDGVTHICPVYEGFA 174
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 57.6 bits (133), Expect = 6e-09
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQ 163
E LV+D GS M K GFAGDDAP VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 57.2 bits (132), Expect = 8e-09
Identities = 22/64 (34%), Positives = 40/64 (62%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P + G++ +WD EKI + + ++ HP+L++EA+ N + REK+T +MF+ +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 427 PAMY 438
PA +
Sbjct: 63 PAFF 66
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGY 548
VL+ +A+GR+ G+V+DS ++ P ++GY
Sbjct: 72 VLTAFANGRSNGLVIDSGATQTSAVPVHDGY 102
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 54.0 bits (124), Expect = 8e-08
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +1
Query: 337 EHPVLLTEASLNPKANREKMTHIMFQTFNTPAMY 438
+HPVLLTEA LNP+ NREK + F+TFN PA++
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALF 159
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYA+GRTTG+VLD+ S P YEG+A
Sbjct: 165 VLSLYATGRTTGVVLDAGDGVSHSVPIYEGFA 196
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 54.0 bits (124), Expect = 8e-08
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +2
Query: 32 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVG--MGQKD-SYV 202
FK+ A+V+DNG G+ K GFAGD P + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 203 GDEAQSKRGILTLKYPIDTESSLTGMT 283
GD A +K G++ L + +GMT
Sbjct: 753 GDAAVAKSGVMHLN-QLSLSLYASGMT 778
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 459 LSLYASGRTTGIVLDSRTVSSTPCPFYEGY 548
LSLYASG T G+ L S + YEG+
Sbjct: 770 LSLYASGMTLGVCLSSGFSCTQAAVIYEGH 799
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/32 (68%), Positives = 23/32 (71%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTG+V DS S P YEGYA
Sbjct: 18 VLSLYASGRTTGVVFDSGDGVSHNVPIYEGYA 49
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASL 369
P RH IV +WD ME+ W + LR PE+H LL +L
Sbjct: 301 PIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLLAVLAL 341
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 160 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 44
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 216 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 411 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 135 GNTAQGASSPAKPALHIPEPLSTT 64
GNT + PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.9 bits (64), Expect = 1.4
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -1
Query: 223 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 59
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 58 GNFFVAHLELVK 23
G V L+ K
Sbjct: 521 GQVDVLLLDFQK 532
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 274 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 252 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 135 GNTAQGASSPAKPALHIPEPLSTT 64
GNT + PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 244 IPHRHGIVTNWDDMEKIWHHTFYNE 318
+P + G + NWD ++IW +TF E
Sbjct: 291 LPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 128 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C ++LSH + H M D +HG RS SCET L T
Sbjct: 176 ICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05)
Length = 117
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 86 MCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKD-SYVGDEAQSKRGI 232
+CKAGF+GD C V + G +H + G D S+ + A+ RG+
Sbjct: 22 ICKAGFSGDGTTCRVDNCVNGCSKHGKCIRGFCICDHSHYFNGAECARGL 71
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 35 KMCDEEVAALVVDNG-SGMCKAGFAGDDAPC 124
++CD++ + +N MCKAG+ GD C
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGDGITC 517
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 135 GNTAQGASSPAKPALHIPEPLSTT 64
GNT + PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_42341| Best HMM Match : DUF701 (HMM E-Value=3)
Length = 651
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = +1
Query: 268 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKM--THIMFQTFNTPAMYG 441
TN+ + +W H + P V L + ++ P N E + H++F+ + G
Sbjct: 496 TNFSESRCVWLHKEEQQTTHRPSRQVVTLVDYAVCPFVNHEVLVKVHLLFEE-RCAVLVG 554
Query: 442 GHPSPCSRCTRPVVPPVSCWTP 507
G C R RP P+ +P
Sbjct: 555 G---SCRRGCRPRRAPLVALSP 573
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -3
Query: 212 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRRKEHHLLRNRPCTYRSHCLLPTRQLLRR 42
P L +P + RPS + S + + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = +1
Query: 253 RHGIVTNWDDMEKIWHHT---FYNELR---VAPEEHPVLLTEASLNPKAN 384
R G+V + + + K+WHHT ++ V EH LL + S+ P+ N
Sbjct: 424 RGGVVEHTEPLLKVWHHTQEVCVGHIQGGGVGVVEHTELLLKVSIVPRTN 473
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEASLNPKANRE 390
P +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 134 PFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_30821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 360 GFPQPQ--GQQREDDPYHVPNIQHAR 431
G+P P+ G+ DP+HV ++HA+
Sbjct: 46 GYPNPRINGEDNNQDPWHVIRLRHAQ 71
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 150 LPTIEGNTAQGASSPAKPALHIPEPLSTTNAATSSSH 40
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)
Length = 1671
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 366 PQPQGQQREDDPYHVP-NIQHARHVRWPSKPVLSLYASGRTTG 491
P P+ Q+E PY P + + PS P L S RT G
Sbjct: 99 PSPRHAQKESSPYPFPTKFKEVLRLSQPSAPPALLKTSKRTDG 141
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 245 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_41722| Best HMM Match : Extensin_2 (HMM E-Value=0.35)
Length = 343
Score = 27.5 bits (58), Expect = 7.7
Identities = 23/87 (26%), Positives = 31/87 (35%)
Frame = +2
Query: 242 KYPIDTESSLTGMTWRRFGIIPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXISCSKHS 421
+YP+D+ S R+ I P T PP NT + +
Sbjct: 125 RYPVDSARSRFSCFQRQSQIPPWTAPEQEPPNNTPPWTAPEPFPPVDSARAGSSMDKARA 184
Query: 422 TRPPCTVAIQARALAVRVRSYHRYRAG 502
PP ARA + RVR RY +G
Sbjct: 185 RSPPVD---SARARSPRVRHQARYHSG 208
>SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13)
Length = 1287
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 330 PRGTPSPAH*GFPQPQGQQREDDPYH 407
PR T +P+H P QG QR PY+
Sbjct: 938 PRYTSTPSHPRIPGQQGVQRYPGPYN 963
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 369 QPQGQQREDDPYHVPNIQHARHVRWPSKPVLSLYASGR 482
QPQ QQ++ P + + Q PS P YASG+
Sbjct: 1890 QPQLQQQQQQPSNYQSYQAINMPTQPSYPSYDQYASGQ 1927
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 415 TFNTPAMYGGHPSPCSRCTRPVVPPVSCWTPGRCLP 522
T +TPA YG P+ C + V P C PGR P
Sbjct: 235 TGHTPAWYGSCPTGGYYCLQGVSSPQPC-PPGRYAP 269
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1644 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 672 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
LC + ++LSH + H L +HG R +SCET L T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1)
Length = 535
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 167 RPDGGAFPRSRGTRRKEHHLLRNRPCTYRSHCLL 66
+P+G + P+ + ++K HH + T R HC+L
Sbjct: 109 KPNGVSSPKKK--KKKHHHKHEEKHFTDRDHCIL 140
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 227 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1082 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 25 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,843,833
Number of Sequences: 59808
Number of extensions: 556936
Number of successful extensions: 1757
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1744
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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