Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0081
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 152 2e-37
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 152 2e-37
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 152 2e-37
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 152 2e-37
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 152 2e-37
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 152 2e-37
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 152 2e-37
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 152 2e-37
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 151 4e-37
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 151 4e-37
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 151 4e-37
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 149 1e-36
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 145 2e-35
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 136 1e-32
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 136 1e-32
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 93 2e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 74 8e-14
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 71 6e-13
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 69 3e-12
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 32 0.32
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 32 0.32
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 29 2.2
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 29 2.2
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 29 2.2
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 2.2
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical ... 28 3.9
AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical ... 28 3.9
AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical ... 28 3.9
AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical ... 28 3.9
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 6.8
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 6.8
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 6.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 6.8
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 6.8
AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical ... 27 6.8
AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical ... 27 6.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 152 bits (368), Expect = 2e-37
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
MCD+EVAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 136 bits (328), Expect = 1e-32
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 427 PAMY 438
PAMY
Sbjct: 131 PAMY 134
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTG+VLDS + P YEGYA
Sbjct: 140 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 152 bits (368), Expect = 2e-37
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
MCD+EVAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 136 bits (328), Expect = 1e-32
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 427 PAMY 438
PAMY
Sbjct: 131 PAMY 134
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTG+VLDS + P YEGYA
Sbjct: 140 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 152 bits (368), Expect = 2e-37
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
MCD+EVAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 136 bits (328), Expect = 1e-32
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 427 PAMY 438
PAMY
Sbjct: 131 PAMY 134
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTG+VLDS + P YEGYA
Sbjct: 140 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 152 bits (368), Expect = 2e-37
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
MCD+EVAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 136 bits (328), Expect = 1e-32
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 427 PAMY 438
PAMY
Sbjct: 131 PAMY 134
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTG+VLDS + P YEGYA
Sbjct: 140 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 152 bits (368), Expect = 2e-37
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
MCD+EVAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 136 bits (328), Expect = 1e-32
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 427 PAMY 438
PAMY
Sbjct: 131 PAMY 134
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTG+VLDS + P YEGYA
Sbjct: 140 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 152 bits (368), Expect = 2e-37
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
MCD+EVAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 136 bits (328), Expect = 1e-32
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 427 PAMY 438
PAMY
Sbjct: 131 PAMY 134
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTG+VLDS + P YEGYA
Sbjct: 140 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 152 bits (368), Expect = 2e-37
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
MCD+EVAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 35.9 bits (79), Expect = 0.019
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKI 294
P HGIVTNWDDMEKI
Sbjct: 71 PIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 152 bits (368), Expect = 2e-37
Identities = 70/73 (95%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
MCD+EVAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 35.9 bits (79), Expect = 0.019
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKI 294
P HGIVTNWDDMEKI
Sbjct: 71 PIEHGIVTNWDDMEKI 86
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 151 bits (365), Expect = 4e-37
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
MCD++VAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 136 bits (328), Expect = 1e-32
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 427 PAMY 438
PAMY
Sbjct: 131 PAMY 134
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/32 (71%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIVLDS + P YEGYA
Sbjct: 140 VLSLYASGRTTGIVLDSGDGVTHTVPIYEGYA 171
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 151 bits (365), Expect = 4e-37
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
MCD++VAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 35.9 bits (79), Expect = 0.019
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKI 294
P HGIVTNWDDMEKI
Sbjct: 71 PIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 151 bits (365), Expect = 4e-37
Identities = 69/73 (94%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
MCD++VAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 30.3 bits (65), Expect = 0.96
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1
Query: 247 PHRHGIVTNWDDM 285
P HGIVTNWDDM
Sbjct: 71 PIEHGIVTNWDDM 83
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 149 bits (361), Expect = 1e-36
Identities = 67/73 (91%), Positives = 72/73 (98%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
MCD++VAAL++DNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 218 SKRGILTLKYPID 256
SKRGILTLKYPI+
Sbjct: 61 SKRGILTLKYPIE 73
Score = 136 bits (328), Expect = 1e-32
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 427 PAMY 438
PAMY
Sbjct: 131 PAMY 134
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/32 (71%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIVLDS + P YEGYA
Sbjct: 140 VLSLYASGRTTGIVLDSGDGVTHTVPIYEGYA 171
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 145 bits (352), Expect = 2e-35
Identities = 67/71 (94%), Positives = 70/71 (98%)
Frame = +2
Query: 44 DEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 223
+EE+AALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 224 RGILTLKYPID 256
RGILTLKYPI+
Sbjct: 62 RGILTLKYPIE 72
Score = 134 bits (324), Expect = 4e-32
Identities = 57/64 (89%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEA LNPK+NREKMT IMF+TFNT
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNT 129
Query: 427 PAMY 438
PAMY
Sbjct: 130 PAMY 133
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTGIVLD+ + P YEGYA
Sbjct: 139 VLSLYASGRTTGIVLDTGDGVTHTVPIYEGYA 170
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 136 bits (328), Expect = 1e-32
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFNT
Sbjct: 27 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 86
Query: 427 PAMY 438
PAMY
Sbjct: 87 PAMY 90
Score = 62.5 bits (145), Expect = 2e-10
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +2
Query: 170 MVGMGQKDSYVGDEAQSKRGILTLKYPID 256
MVGMGQKDSYVGDEAQSKRGILTLKYPI+
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIE 29
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTG+VLDS + P YEGYA
Sbjct: 96 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 127
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 136 bits (328), Expect = 1e-32
Identities = 59/64 (92%), Positives = 60/64 (93%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFNT
Sbjct: 57 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 116
Query: 427 PAMY 438
PAMY
Sbjct: 117 PAMY 120
Score = 113 bits (272), Expect = 8e-26
Identities = 52/55 (94%), Positives = 54/55 (98%)
Frame = +2
Query: 92 KAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPID 256
+AGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI+
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 59
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYASGRTTG+VLDS + P YEGYA
Sbjct: 126 VLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 157
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 92.7 bits (220), Expect = 2e-19
Identities = 39/67 (58%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Frame = +1
Query: 241 QIPHRHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQT 417
+ P HGIV NW DMEKIW + F ++L++ PEEHPVLLT+A LNP NRE+ I F+T
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 418 FNTPAMY 438
FN PA+Y
Sbjct: 131 FNVPALY 137
Score = 70.5 bits (165), Expect = 7e-13
Identities = 29/65 (44%), Positives = 46/65 (70%)
Frame = +2
Query: 62 LVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 241
+V+DNGSG+ KAGFAG+ P F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 242 KYPID 256
+YP++
Sbjct: 71 EYPME 75
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLSLYA+GRTTG+VLDS + P +G+A
Sbjct: 143 VLSLYATGRTTGVVLDSGDGVTHAVPIVKGFA 174
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 73.7 bits (173), Expect = 8e-14
Identities = 32/64 (50%), Positives = 39/64 (60%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
P RHGIV +WD ME+ W + LR PE+H LLTE LN NRE IMF++FN
Sbjct: 84 PIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNV 143
Query: 427 PAMY 438
P +Y
Sbjct: 144 PGLY 147
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Frame = +2
Query: 38 MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSI------VGRPRHQG------VMVGM 181
M ++ A V+DNG+G K G+AG+ P + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 182 GQKDSYVGDEAQSKRGI-LTLKYPI 253
D ++GDEA S T+KYPI
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPI 85
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 70.9 bits (166), Expect = 6e-13
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +1
Query: 235 DPQIPHRHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEASLNPKANREKMTHIMF 411
D P +GIV NWDDM +W HTF E L + P+E +LLTE LNP +NREKM +MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 412 QTFNTPAMY 438
+ + ++Y
Sbjct: 129 EQYGFNSIY 137
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +2
Query: 62 LVVDNGSGMCKAGFAGDDAPCAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 235
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 236 TLKYPID 256
+ YP+D
Sbjct: 69 DINYPMD 75
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VL+LYA G TG+V+DS + CP YEG+A
Sbjct: 143 VLTLYAQGLLTGVVVDSGDGVTHICPVYEGFA 174
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 68.5 bits (160), Expect = 3e-12
Identities = 29/62 (46%), Positives = 41/62 (66%)
Frame = +1
Query: 253 RHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNTPA 432
+ G++ +W+ EKI H++ N L P EHPVL +E+S N +A REK+T IMF+ F PA
Sbjct: 95 KEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVPA 154
Query: 433 MY 438
Y
Sbjct: 155 YY 156
Score = 35.1 bits (77), Expect = 0.034
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
VLS +A GRT G+++DS ++ P ++GYA
Sbjct: 162 VLSCFAQGRTHGLMVDSGATQTSVVPVFDGYA 193
Score = 31.5 bits (68), Expect = 0.42
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 47 EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIV 145
+EV+ LV D GS + GFAG++ P PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.1 bits (72), Expect = 0.14
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = -2
Query: 273 VSDDSVSMGYLRVRIPLLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TAQGASSPAKP 97
VS ++S PL++ +SS S TITP +G+PT N S+P P
Sbjct: 449 VSTLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTP 508
Query: 96 ALHIPEPLSTTNAATSSS 43
+ STT A +++S
Sbjct: 509 KSTVTASPSTTGATSTAS 526
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTF 420
P G V NWD ++IW TF + V + LT+ + A + + I+F F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 31.9 bits (69), Expect = 0.32
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +1
Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTF 420
P G V NWD ++IW TF + V + LT+ + A + + I+F F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 244 IPHRHGIVTNWDDMEKIWHHTFYNE--LRVAPEEHPV 348
+ +RH +++D++ IWHH Y E L+ E +PV
Sbjct: 163 LSNRHFQQRHYNDLQDIWHHARYKESQLKRGKELNPV 199
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 385 REKMTHIMFQTFNTPAMYGGHPSPCSRCTRPVVPPV 492
RE+ T + PA YGGH SP S+ PVV PV
Sbjct: 1563 REEPTKEGVRLLPMPA-YGGHYSPLSQFLPPVVQPV 1597
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1
Query: 385 REKMTHIMFQTFNTPAMYGGHPSPCSRCTRPVVPPV 492
RE+ T + PA YGGH SP S+ PVV PV
Sbjct: 1591 REEPTKEGVRLLPMPA-YGGHYSPLSQFLPPVVQPV 1625
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 333 RGTPSPAH*GFPQPQGQQREDDPYHVPNIQHARHVRWPSKP 455
RG P PAH G P G + P H P H P P
Sbjct: 111 RGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGPPGP 151
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 211 GTEQKRYPDPQIPHRHGIVTNWDDMEKIWHHTFYNELRVAP---EEHPVLLTEASLNPKA 381
GTE K Y + ++ GI +W + + +E+ VA + L+TE +NP++
Sbjct: 1348 GTEHKSYFNKELSSPEGIAVDWSSRNVYYADSMNDEIGVASLNGKFKKSLVTEGLVNPRS 1407
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 224 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRRKEH-HLLRNRPCTYRSHCL 69
FC + H++ + P R D +RG + +H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -3
Query: 224 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRRKEH-HLLRNRPCTYRSHCL 69
FC + H++ + P R D +RG + +H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>AC006762-4|AAU20835.1| 484|Caenorhabditis elegans Hypothetical
protein Y42G9A.4c protein.
Length = 484
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 515 HRPGVQHDTGGTTGRVQREHGLG 447
HRP ++ + GG TG +E+GLG
Sbjct: 293 HRPLLEENGGGDTGSTVQENGLG 315
>AC006762-3|AAU20834.1| 614|Caenorhabditis elegans Hypothetical
protein Y42G9A.4b protein.
Length = 614
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 515 HRPGVQHDTGGTTGRVQREHGLG 447
HRP ++ + GG TG +E+GLG
Sbjct: 423 HRPLLEENGGGDTGSTVQENGLG 445
>AC006762-2|AAF60558.2| 607|Caenorhabditis elegans Hypothetical
protein Y42G9A.4a protein.
Length = 607
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 515 HRPGVQHDTGGTTGRVQREHGLG 447
HRP ++ + GG TG +E+GLG
Sbjct: 416 HRPLLEENGGGDTGSTVQENGLG 438
>AC006762-1|AAU87813.1| 514|Caenorhabditis elegans Hypothetical
protein Y42G9A.4d protein.
Length = 514
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 515 HRPGVQHDTGGTTGRVQREHGLG 447
HRP ++ + GG TG +E+GLG
Sbjct: 323 HRPLLEENGGGDTGSTVQENGLG 345
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 142 RGKAPPSGRDGRYGTEG 192
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 117 ASSPAKPALHIPEPLSTTNAATSS 46
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 117 ASSPAKPALHIPEPLSTTNAATSS 46
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 117 ASSPAKPALHIPEPLSTTNAATSS 46
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 117 ASSPAKPALHIPEPLSTTNAATSS 46
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical
protein ZK484.4a protein.
Length = 919
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 185 QKDSYVGDEAQSKRGILTLKYPIDTESSLTGM 280
++D +G E+ SKR +T+K ID E T M
Sbjct: 458 EEDGEIGAESTSKRKTVTIKEEIDEEVKQTPM 489
>AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical
protein ZK484.4b protein.
Length = 873
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 185 QKDSYVGDEAQSKRGILTLKYPIDTESSLTGM 280
++D +G E+ SKR +T+K ID E T M
Sbjct: 458 EEDGEIGAESTSKRKTVTIKEEIDEEVKQTPM 489
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,355,038
Number of Sequences: 27780
Number of extensions: 377630
Number of successful extensions: 1387
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1371
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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