Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0073
(577 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 33 0.11
U61946-5|AAC24389.1| 391|Caenorhabditis elegans Hypothetical pr... 33 0.11
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 33 0.11
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 32 0.25
U58751-8|AAB00659.2| 635|Caenorhabditis elegans Hypothetical pr... 32 0.34
U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile (un... 31 0.59
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 31 0.59
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 31 0.78
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 31 0.78
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 31 0.78
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 31 0.78
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 30 1.0
AL031630-17|CAA20998.1| 198|Caenorhabditis elegans Hypothetical... 30 1.4
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 29 1.8
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 29 1.8
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 29 1.8
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 29 2.4
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 29 3.1
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 4.1
AL021176-1|CAA15975.2| 317|Caenorhabditis elegans Hypothetical ... 28 4.1
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 4.1
Z83316-2|CAB05891.1| 226|Caenorhabditis elegans Hypothetical pr... 28 5.5
AL032656-1|CAA21730.1| 223|Caenorhabditis elegans Hypothetical ... 28 5.5
AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b prot... 28 5.5
AF068718-7|AAM45356.1| 274|Caenorhabditis elegans Hypothetical ... 27 7.2
AF067940-7|AAC19206.1| 116|Caenorhabditis elegans Hypothetical ... 27 7.2
Z37983-10|CAA86060.4| 267|Caenorhabditis elegans Hypothetical p... 27 9.5
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 27 9.5
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +1
Query: 340 TEEPLCQDGFLACG--DSTCIERGLFCNGEKDC 432
T EP C + ACG D+ CI + +C+GE DC
Sbjct: 3622 TCEPNCTERQFACGGDDAKCIPKLWYCDGEPDC 3654
Score = 31.1 bits (67), Expect = 0.59
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +1
Query: 211 GNTSYTL--PGRFVLRYEKQTCDWKDAVKNCKLKNKERKIKPLLY--TEEPLCQDGFLAC 378
G YT P +FVL +++TC+ + + K P L+ EP C+DG
Sbjct: 3602 GGNGYTCSCPDQFVLLSDQKTCEPNCTERQFACGGDDAKCIPKLWYCDGEPDCRDGSDEP 3661
Query: 379 GDSTCIER 402
G+S C +R
Sbjct: 3662 GESICGQR 3669
Score = 31.1 bits (67), Expect = 0.59
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 355 CQDGFLACGDS-TCIERGLFCNGEKDC 432
C+ G+ C S CI FCNG+ DC
Sbjct: 3793 CKKGWTRCSSSYRCIPNWAFCNGQDDC 3819
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C G C D TCI +C+ +KDC
Sbjct: 3917 CLPGHRQCDDGTCIAEHKWCDRKKDC 3942
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +1
Query: 274 WKDAVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
W D K+C E + + C C +S CI R C+G+ DC
Sbjct: 3935 WCDRKKDCPNAADELHCEDV---SRRTCSPFEFECANSVCIPRKFMCDGDNDC 3984
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 274 WK-DAVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
WK D ++C + E K T C CG+ CI C+GE DC
Sbjct: 1288 WKCDGQQDCDDGSDEPKFG---CTSGRQCSSDQFKCGNGRCILNNWLCDGENDC 1338
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 331 LLYTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
L TE+ C G C + CI C+G+ DC
Sbjct: 3092 LCKTEKKECNKGEFRCSNQHCIHSTWECDGDNDC 3125
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +1
Query: 310 KERKIKPLLYTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
+ R I + T +C + C D CI C+G DC
Sbjct: 38 RSRIISASVNTASSVCNENDFRCNDGKCIRTEWKCDGSGDC 78
Score = 28.7 bits (61), Expect = 3.1
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C +G C + CI + C+G DC
Sbjct: 2874 CAEGTFPCSNGHCINQTKVCDGHNDC 2899
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 361 DGFLACGDSTCIERGLFCNGEKDC 432
D C + CI R C+GE DC
Sbjct: 3009 DYLFQCDNLKCISRAFICDGEDDC 3032
Score = 28.7 bits (61), Expect = 3.1
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
CQ F C + C+ C+G DC
Sbjct: 3140 CQPDFFQCANHKCVPNSWKCDGNDDC 3165
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 376 CGDST-CIERGLFCNGEKDC 432
C D T CI++ C+G KDC
Sbjct: 189 CADKTQCIQKSWVCDGSKDC 208
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 376 CGDSTCIERGLFCNGEKDC 432
CGD +CI G C+ + DC
Sbjct: 2800 CGDGSCILLGATCDSKPDC 2818
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/57 (26%), Positives = 22/57 (38%)
Frame = +1
Query: 262 QTCDWKDAVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
Q D D +C K E + L+ C ++ C CI C+G+ DC
Sbjct: 2934 QPADLCDGYDDCGDKADENQ----LFCMNQQCAQHYVRCPSGRCIPETWQCDGDNDC 2986
>U61946-5|AAC24389.1| 391|Caenorhabditis elegans Hypothetical
protein F47C12.2 protein.
Length = 391
Score = 33.5 bits (73), Expect = 0.11
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 343 EEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
E P C G C +CI CNG DC
Sbjct: 179 ERPACVQGSYFCSSGSCISESKKCNGHNDC 208
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 33.5 bits (73), Expect = 0.11
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +1
Query: 340 TEEPLCQDGFLACG--DSTCIERGLFCNGEKDC 432
T EP C + ACG D+ CI + +C+GE DC
Sbjct: 3622 TCEPNCTERQFACGGDDAKCIPKLWYCDGEPDC 3654
Score = 31.1 bits (67), Expect = 0.59
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +1
Query: 211 GNTSYTL--PGRFVLRYEKQTCDWKDAVKNCKLKNKERKIKPLLY--TEEPLCQDGFLAC 378
G YT P +FVL +++TC+ + + K P L+ EP C+DG
Sbjct: 3602 GGNGYTCSCPDQFVLLSDQKTCEPNCTERQFACGGDDAKCIPKLWYCDGEPDCRDGSDEP 3661
Query: 379 GDSTCIER 402
G+S C +R
Sbjct: 3662 GESICGQR 3669
Score = 31.1 bits (67), Expect = 0.59
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 355 CQDGFLACGDS-TCIERGLFCNGEKDC 432
C+ G+ C S CI FCNG+ DC
Sbjct: 3793 CKKGWTRCSSSYRCIPNWAFCNGQDDC 3819
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C G C D TCI +C+ +KDC
Sbjct: 3917 CLPGHRQCDDGTCIAEHKWCDRKKDC 3942
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +1
Query: 274 WKDAVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
W D K+C E + + C C +S CI R C+G+ DC
Sbjct: 3935 WCDRKKDCPNAADELHCEDV---SRRTCSPFEFECANSVCIPRKFMCDGDNDC 3984
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 274 WK-DAVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
WK D ++C + E K T C CG+ CI C+GE DC
Sbjct: 1288 WKCDGQQDCDDGSDEPKFG---CTSGRQCSSDQFKCGNGRCILNNWLCDGENDC 1338
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 331 LLYTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
L TE+ C G C + CI C+G+ DC
Sbjct: 3092 LCKTEKKECNKGEFRCSNQHCIHSTWECDGDNDC 3125
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +1
Query: 310 KERKIKPLLYTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
+ R I + T +C + C D CI C+G DC
Sbjct: 38 RSRIISASVNTASSVCNENDFRCNDGKCIRTEWKCDGSGDC 78
Score = 28.7 bits (61), Expect = 3.1
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C +G C + CI + C+G DC
Sbjct: 2874 CAEGTFPCSNGHCINQTKVCDGHNDC 2899
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 361 DGFLACGDSTCIERGLFCNGEKDC 432
D C + CI R C+GE DC
Sbjct: 3009 DYLFQCDNLKCISRAFICDGEDDC 3032
Score = 28.7 bits (61), Expect = 3.1
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
CQ F C + C+ C+G DC
Sbjct: 3140 CQPDFFQCANHKCVPNSWKCDGNDDC 3165
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 376 CGDST-CIERGLFCNGEKDC 432
C D T CI++ C+G KDC
Sbjct: 189 CADKTQCIQKSWVCDGSKDC 208
Score = 27.5 bits (58), Expect = 7.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 376 CGDSTCIERGLFCNGEKDC 432
CGD +CI G C+ + DC
Sbjct: 2800 CGDGSCILLGATCDSKPDC 2818
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/57 (26%), Positives = 22/57 (38%)
Frame = +1
Query: 262 QTCDWKDAVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
Q D D +C K E + L+ C ++ C CI C+G+ DC
Sbjct: 2934 QPADLCDGYDDCGDKADENQ----LFCMNQQCAQHYVRCPSGRCIPETWQCDGDNDC 2986
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C +G CG CIE L CN + DC
Sbjct: 431 CLEGQFKCGTGQCIEESLKCNRKYDC 456
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C +G CG CIE L CN + DC
Sbjct: 431 CLEGQFKCGTGQCIEESLKCNRKYDC 456
>U58751-8|AAB00659.2| 635|Caenorhabditis elegans Hypothetical
protein C07G1.2 protein.
Length = 635
Score = 31.9 bits (69), Expect = 0.34
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
CQ ACGD +CI CNG+ DC
Sbjct: 554 CQQA--ACGDGSCIRFDQLCNGQIDC 577
>U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile
(unfertilizable) protein1 protein.
Length = 551
Score = 31.1 bits (67), Expect = 0.59
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 376 CGDSTCIERGLFCNGEKDC 432
C D TCI R C+G+KDC
Sbjct: 300 CDDGTCIMRTQVCDGKKDC 318
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 31.1 bits (67), Expect = 0.59
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 337 YTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
Y +C+ G+ CG+ CI CN DC
Sbjct: 9 YCSTRVCRPGYFNCGNGLCIPEQKVCNRINDC 40
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Frame = +1
Query: 355 CQDGFLACGDST----CIERGLFCNGEKDC 432
C+ F AC + T CI + +C+GE DC
Sbjct: 948 CKPDFFACFNGTAISKCIPKEFYCDGEDDC 977
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 30.7 bits (66), Expect = 0.78
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C ACG++ C++ C+GE DC
Sbjct: 149 CMADEKACGNNECVKNDYVCDGEPDC 174
Score = 27.9 bits (59), Expect = 5.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C+ C ++ C+++ C+G+ DC
Sbjct: 190 CEPNEFKCNNNKCVQKMWLCDGDDDC 215
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 30.7 bits (66), Expect = 0.78
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C ACG++ C++ C+GE DC
Sbjct: 149 CMADEKACGNNECVKNDYVCDGEPDC 174
Score = 27.9 bits (59), Expect = 5.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C+ C ++ C+++ C+G+ DC
Sbjct: 190 CEPNEFKCNNNKCVQKMWLCDGDDDC 215
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 30.7 bits (66), Expect = 0.78
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C ACG++ C++ C+GE DC
Sbjct: 149 CMADEKACGNNECVKNDYVCDGEPDC 174
Score = 27.9 bits (59), Expect = 5.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C+ C ++ C+++ C+G+ DC
Sbjct: 190 CEPNEFKCNNNKCVQKMWLCDGDDDC 215
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 30.7 bits (66), Expect = 0.78
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C ACG++ C++ C+GE DC
Sbjct: 149 CMADEKACGNNECVKNDYVCDGEPDC 174
Score = 27.9 bits (59), Expect = 5.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C+ C ++ C+++ C+G+ DC
Sbjct: 190 CEPNEFKCNNNKCVQKMWLCDGDDDC 215
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 30.7 bits (66), Expect = 0.78
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C ACG++ C++ C+GE DC
Sbjct: 149 CMADEKACGNNECVKNDYVCDGEPDC 174
Score = 27.9 bits (59), Expect = 5.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C+ C ++ C+++ C+G+ DC
Sbjct: 190 CEPNEFKCNNNKCVQKMWLCDGDDDC 215
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 30.7 bits (66), Expect = 0.78
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C ACG++ C++ C+GE DC
Sbjct: 149 CMADEKACGNNECVKNDYVCDGEPDC 174
Score = 27.9 bits (59), Expect = 5.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C+ C ++ C+++ C+G+ DC
Sbjct: 190 CEPNEFKCNNNKCVQKMWLCDGDDDC 215
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 30.7 bits (66), Expect = 0.78
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C ACG++ C++ C+GE DC
Sbjct: 149 CMADEKACGNNECVKNDYVCDGEPDC 174
Score = 27.9 bits (59), Expect = 5.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C+ C ++ C+++ C+G+ DC
Sbjct: 190 CEPNEFKCNNNKCVQKMWLCDGDDDC 215
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 30.7 bits (66), Expect = 0.78
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C ACG++ C++ C+GE DC
Sbjct: 149 CMADEKACGNNECVKNDYVCDGEPDC 174
Score = 27.9 bits (59), Expect = 5.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C+ C ++ C+++ C+G+ DC
Sbjct: 190 CEPNEFKCNNNKCVQKMWLCDGDDDC 215
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 30.7 bits (66), Expect = 0.78
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C ACG++ C++ C+GE DC
Sbjct: 149 CMADEKACGNNECVKNDYVCDGEPDC 174
Score = 27.9 bits (59), Expect = 5.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C+ C ++ C+++ C+G+ DC
Sbjct: 190 CEPNEFKCNNNKCVQKMWLCDGDDDC 215
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 30.7 bits (66), Expect = 0.78
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C D C + CI + C+GE+DC
Sbjct: 166 CPDNNFQCSNGNCIFKNWVCDGEEDC 191
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 274 WK-DAVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
W+ DA +CK + E+ + +T + L ++ F CI + C+GE DC
Sbjct: 230 WRCDAEVDCKDHSDEKNCTAIQHTCK-LAEE-FACKASHNCINKAFVCDGELDC 281
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 30.7 bits (66), Expect = 0.78
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C D C + CI + C+GE+DC
Sbjct: 168 CPDNNFQCSNGNCIFKNWVCDGEEDC 193
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 274 WK-DAVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
W+ DA +CK + E+ + +T + L ++ F CI + C+GE DC
Sbjct: 232 WRCDAEVDCKDHSDEKNCTAIQHTCK-LAEE-FACKASHNCINKAFVCDGELDC 283
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 30.7 bits (66), Expect = 0.78
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C ACG++ C++ C+GE DC
Sbjct: 149 CMADEKACGNNECVKNDYVCDGEPDC 174
Score = 27.9 bits (59), Expect = 5.5
Identities = 7/26 (26%), Positives = 15/26 (57%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C+ C ++ C+++ C+G+ DC
Sbjct: 190 CEPNEFKCNNNKCVQKMWLCDGDDDC 215
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C DG C + CI C+G +DC
Sbjct: 13 CADGQFRCSNGRCITNDWVCDGARDC 38
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C DG C + CI C+G +DC
Sbjct: 13 CADGQFRCSNGRCITNDWVCDGARDC 38
>AL031630-17|CAA20998.1| 198|Caenorhabditis elegans Hypothetical
protein Y38H6C.19 protein.
Length = 198
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 337 YTEEPLCQDGFLACGDSTCIERGLFCNGE 423
+T + C DGF CG T IER NG+
Sbjct: 155 WTGDHFCPDGFAVCGIQTQIERSQGGNGD 183
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 29.5 bits (63), Expect = 1.8
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C F+ C + C+ C+GE DC
Sbjct: 75 CSTSFMLCKNGLCVANEFKCDGEDDC 100
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 349 PLCQDGFLACGDSTCIERGLFCNGEKDC 432
P C L C CI+ L C+G +DC
Sbjct: 135 PECHPPRLRCRSGQCIQPDLVCDGHQDC 162
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 343 EEPLCQDGFLAC--GDSTCIERGLFCNGEKDC 432
E+ C+ G+ C GD CI C+G+ DC
Sbjct: 200 EDNKCRSGYTMCHSGD-VCIPDSFLCDGDLDC 230
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 29.5 bits (63), Expect = 1.8
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C F+ C + C+ C+GE DC
Sbjct: 75 CSTSFMLCKNGLCVANEFKCDGEDDC 100
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 349 PLCQDGFLACGDSTCIERGLFCNGEKDC 432
P C L C CI+ L C+G +DC
Sbjct: 135 PECHPPRLRCRSGQCIQPDLVCDGHQDC 162
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 343 EEPLCQDGFLAC--GDSTCIERGLFCNGEKDC 432
E+ C+ G+ C GD CI C+G+ DC
Sbjct: 200 EDNKCRSGYTMCHSGD-VCIPDSFLCDGDLDC 230
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 29.5 bits (63), Expect = 1.8
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 355 CQDGFLACGDSTCIERGLFCNGEKDC 432
C F+ C + C+ C+GE DC
Sbjct: 75 CSTSFMLCKNGLCVANEFKCDGEDDC 100
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 349 PLCQDGFLACGDSTCIERGLFCNGEKDC 432
P C L C CI+ L C+G DC
Sbjct: 135 PECHPPRLRCRSGQCIQPDLVCDGHTDC 162
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 343 EEPLCQDGFLAC--GDSTCIERGLFCNGEKDC 432
E+ C+ G+ C GD CI C+G+ DC
Sbjct: 200 EDNKCRSGYTMCHSGD-VCIPDSFLCDGDLDC 230
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 376 CGDSTCIERGLFCNGEKDC 432
C D TCI R C+G+ DC
Sbjct: 300 CEDGTCIMRSQVCDGKHDC 318
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 349 PLCQDGFLACGDSTCIERGLFCNGEKDC 432
P C L C CI+ L C+G DC
Sbjct: 135 PECHPPRLRCRSGQCIQPDLVCDGHTDC 162
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 343 EEPLCQDGFLAC--GDSTCIERGLFCNGEKDC 432
E+ C+ G+ C GD CI C+G+ DC
Sbjct: 200 EDNKCRSGYTMCHSGD-VCIPDSFLCDGDLDC 230
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 340 TEEPLCQDGFLACGDST-CIERGLFCNGEKDC 432
++EP Q+ F C D T CI + F +G++DC
Sbjct: 127 SDEPCAQNQF-QCSDGTKCIPKAQFQDGKEDC 157
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 340 TEEPLCQDGFLACGDST-CIERGLFCNGEKDC 432
++EP Q+ F C D T CI + F +G++DC
Sbjct: 127 SDEPCAQNQF-QCSDGTKCIPKAQFQDGKEDC 157
>AL021176-1|CAA15975.2| 317|Caenorhabditis elegans Hypothetical
protein Y43E12A.1 protein.
Length = 317
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 417 VTEKTAFNASRVAASEEAILTEWFFSVQERLYFTLLVLELTIF 289
V + + N V + IL +W V R + T L LTIF
Sbjct: 47 VLDDSFINGGNVNSKMRRILVDWLIQVHLRFHLTPETLHLTIF 89
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 340 TEEPLCQDGFLACGDST-CIERGLFCNGEKDC 432
++EP Q+ F C D T CI + F +G++DC
Sbjct: 127 SDEPCAQNQF-QCSDGTKCIPKAQFQDGKEDC 157
>Z83316-2|CAB05891.1| 226|Caenorhabditis elegans Hypothetical
protein B0379.2 protein.
Length = 226
Score = 27.9 bits (59), Expect = 5.5
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +2
Query: 86 ETAKKDESLEQELCKDKDAGEWFRLVAGEGDNCRDVIQCTASGIQAIRCPAGLFFDMRNR 265
E K+D EQE D+ + L+AGE RD Q A G + M+ R
Sbjct: 106 EKKKEDSKAEQEFVLDETNPHFAFLLAGEN---RDPAQSVLHAKNAFEHSNGFMWTMKKR 162
Query: 266 PAIGKML*KIVSSRTRSVK 322
A + K +S R +++
Sbjct: 163 LAFDEGCWKHLSRRIGAIR 181
>AL032656-1|CAA21730.1| 223|Caenorhabditis elegans Hypothetical
protein Y106G6E.3 protein.
Length = 223
Score = 27.9 bits (59), Expect = 5.5
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +2
Query: 86 ETAKKDESLEQELCKDKDAGEWFRLVAGEGDNCRDVIQCTASGIQAIRCPAGLFFDMRNR 265
E K+D EQE D+ + L+AGE RD Q A G + M+ R
Sbjct: 111 EKKKEDSKAEQEFVLDETNPHFAFLLAGEN---RDPAQSVLHAKNAFEHSNGFMWTMKKR 167
Query: 266 PAIGKML*KIVSSRTRSVK 322
A + K +S R +++
Sbjct: 168 LAFDEGCWKHLSRRIGAIR 186
>AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b protein
2.2 protein.
Length = 339
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 417 VTEKTAFNASRVAASEEAILTEWFFSVQERLYFTLLVLELTIF 289
V + + N V + IL +W V R + T L LTIF
Sbjct: 69 VLDDSFINGGNVNSKMRRILVDWLVQVHLRFHLTPETLHLTIF 111
>AF068718-7|AAM45356.1| 274|Caenorhabditis elegans Hypothetical
protein R01B10.6 protein.
Length = 274
Score = 27.5 bits (58), Expect = 7.2
Identities = 28/90 (31%), Positives = 39/90 (43%)
Frame = -2
Query: 441 PSPTVLFAVTEKTAFNASRVAASEEAILTEWFFSVQERLYFTLLVLELTIFHSIFPIAGL 262
PS ++F V +K A N E I+T F ++ LY+ TIF S F + G+
Sbjct: 167 PSTKLVFVVQDKFA-NIEEA----ELIVTARFGLIRHLLYYWPTTSYATIFVSTF-VIGV 220
Query: 261 FLISKNKPAGQRIACIPEAVHWMTSRQLSP 172
FLI K Q A+ +LSP
Sbjct: 221 FLI-MTKIGYQEYTARTRAILEKEKEELSP 249
>AF067940-7|AAC19206.1| 116|Caenorhabditis elegans Hypothetical
protein F36F12.7 protein.
Length = 116
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -2
Query: 312 LVLELTIFHSIFPIAG-LFLISKNKPAGQR-IACIPEAVHWMTSRQLSPSPATSR 154
+VL I I P+ LF+ K+KP+G + +A P A + R +PSP +
Sbjct: 4 IVLLFKIILQILPLVPVLFMCKKSKPSGAKPVADTPPAA-MIAPRSRTPSPGAGK 57
>Z37983-10|CAA86060.4| 267|Caenorhabditis elegans Hypothetical
protein B0393.7 protein.
Length = 267
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 280 DAVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDSTCIERGLFCNGEKDC 432
DA+ + + K KE K K L + C G C D C++ +G++DC
Sbjct: 163 DAITSTE-KPKEPKKKTALQVSKR-CDLGEFRCLDGECLDVSKVLDGQEDC 211
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 352 LCQDGFLACGDSTCIERGLFCNGEKDC 432
LC CG CI++ C+G+ C
Sbjct: 1052 LCDPDEFRCGTGLCIKQSQVCDGKMQC 1078
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,817,590
Number of Sequences: 27780
Number of extensions: 295979
Number of successful extensions: 1165
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -