Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0073
(577 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11240.1 68416.m01367 arginine-tRNA-protein transferase, puta... 30 1.3
At1g55350.4 68414.m06326 calpain-type cysteine protease family i... 30 1.3
At1g55350.3 68414.m06325 calpain-type cysteine protease family i... 30 1.3
At1g55350.2 68414.m06324 calpain-type cysteine protease family i... 30 1.3
At1g55350.1 68414.m06323 calpain-type cysteine protease family i... 30 1.3
At1g70330.1 68414.m08091 equilibrative nucleoside transporter fa... 29 1.7
At5g05480.1 68418.m00590 expressed protein 29 2.2
At1g60160.1 68414.m06777 potassium transporter family protein si... 29 2.9
At5g50070.1 68418.m06200 invertase/pectin methylesterase inhibit... 28 3.9
At1g69830.1 68414.m08034 alpha-amylase, putative / 1,4-alpha-D-g... 28 3.9
At5g12120.1 68418.m01423 ubiquitin-associated (UBA)/TS-N domain-... 28 5.1
At5g09410.1 68418.m01090 calmodulin-binding protein similar to a... 28 5.1
At3g54570.1 68416.m06038 calmodulin-binding protein-related cont... 27 9.0
At2g19240.1 68415.m02246 RabGAP/TBC domain-containing protein lo... 27 9.0
>At3g11240.1 68416.m01367 arginine-tRNA-protein transferase,
putative / arginyltransferase, putative /
arginyl-tRNA-protein transferase, putative similar to
SP|Q9ZT48 Arginine-tRNA-protein transferase 1 (EC
2.3.2.8) (R-transferase 1) (Arginyltransferase 1)
(Arginyl-tRNA--protein transferase 1) {Arabidopsis
thaliana}; contains Pfam profiles PF04377:
Arginine-tRNA-protein transferase C terminus, PF04376:
Arginine-tRNA-protein transferase N terminus
Length = 605
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 552 SLCRPGSRSSQERTHARNRMAELYLGRCQYHKE 454
SLC +SS + HAR R E++L R + E
Sbjct: 290 SLCATTIKSSSNKLHARKRKLEMHLKRSSFEPE 322
>At1g55350.4 68414.m06326 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = -2
Query: 522 QERTHARNRMAELYLGRCQYHKEFSSDPSPTVLFAVTEKTAFNASRVAASEEAILTEWFF 343
++R R+A + Q K F +P V + + +RV A EEAI TEW +
Sbjct: 1173 RDRLRNEERVAGSIFYKMQCRKGFRHEPPTNVDY---RRDMCAHARVLALEEAIDTEWVY 1229
Query: 342 SVQERLYFTLLVLELT 295
+ + LL+L LT
Sbjct: 1230 MWDKFGGYLLLLLGLT 1245
>At1g55350.3 68414.m06325 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = -2
Query: 522 QERTHARNRMAELYLGRCQYHKEFSSDPSPTVLFAVTEKTAFNASRVAASEEAILTEWFF 343
++R R+A + Q K F +P V + + +RV A EEAI TEW +
Sbjct: 1173 RDRLRNEERVAGSIFYKMQCRKGFRHEPPTNVDY---RRDMCAHARVLALEEAIDTEWVY 1229
Query: 342 SVQERLYFTLLVLELT 295
+ + LL+L LT
Sbjct: 1230 MWDKFGGYLLLLLGLT 1245
>At1g55350.2 68414.m06324 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = -2
Query: 522 QERTHARNRMAELYLGRCQYHKEFSSDPSPTVLFAVTEKTAFNASRVAASEEAILTEWFF 343
++R R+A + Q K F +P V + + +RV A EEAI TEW +
Sbjct: 1173 RDRLRNEERVAGSIFYKMQCRKGFRHEPPTNVDY---RRDMCAHARVLALEEAIDTEWVY 1229
Query: 342 SVQERLYFTLLVLELT 295
+ + LL+L LT
Sbjct: 1230 MWDKFGGYLLLLLGLT 1245
>At1g55350.1 68414.m06323 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = -2
Query: 522 QERTHARNRMAELYLGRCQYHKEFSSDPSPTVLFAVTEKTAFNASRVAASEEAILTEWFF 343
++R R+A + Q K F +P V + + +RV A EEAI TEW +
Sbjct: 1173 RDRLRNEERVAGSIFYKMQCRKGFRHEPPTNVDY---RRDMCAHARVLALEEAIDTEWVY 1229
Query: 342 SVQERLYFTLLVLELT 295
+ + LL+L LT
Sbjct: 1230 MWDKFGGYLLLLLGLT 1245
>At1g70330.1 68414.m08091 equilibrative nucleoside transporter
family protein contains similarity to SWISS-PROT:Q14542
equilibrative nucleoside transporter 2 (Equilibrative
nitrobenzylmercaptopurine riboside-insensitive
nucleoside transporter, Equilibrative NBMPR-insensitive
nucleoside transporter, Nucleoside transporter, ei-type,
36 kDa nucleolar protein HNP36, Hydrophobic nucleolar
protein, 36 kDa, Delayed-early response protein 12)
[Homo sapiens]
Length = 450
Score = 29.5 bits (63), Expect = 1.7
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = -3
Query: 542 VLEAEAVRKGHMRGIAWRSSIWVVVNITKN 453
++ ++ KG + G+AWR+++W +V K+
Sbjct: 270 LIREKSEEKGSLTGLAWRTTLWDIVTKVKS 299
>At5g05480.1 68418.m00590 expressed protein
Length = 608
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -2
Query: 501 NRMAELYLGRCQYHKEFSSDPSPTVLFAVTEKTAFNASRVAASEEAILTEWFFSVQERLY 322
+R++ L+LG + + +++PSP+ +F K S + + +T ++ +Y
Sbjct: 115 DRISGLWLGGVELLRTSTAEPSPSGIFWNVRKDVSRYSSLFMRSDLNVTMMLENIVNDVY 174
Query: 321 FTLLVLELT-IFHSIFPIAGLFLIS 250
+ + +T IF+ PIA IS
Sbjct: 175 TGIYHINVTLIFYEFNPIASNLKIS 199
>At1g60160.1 68414.m06777 potassium transporter family protein
similar to potassium transporter HAK2p [Mesembryanthemum
crystallinum] gi|14091471|gb|AAK53759; KUP/HAK/KT
Transporter family member, PMID:11500563; contains Pfam
profile PF02705: K+ potassium transporter
Length = 827
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = -2
Query: 438 SPTVLFAVTEKTAFNASRVAASEEAILTEWFFSVQERLYFTLLVLELTIFHSIFPIAGLF 259
S +L A+ F +V +L WFFS+ + LL + T+ ++ P +
Sbjct: 264 SIVILVALFSIQRFGTGKVGFLFAPVLALWFFSLGAIGIYNLLKYDFTVIRALNPFYIVL 323
Query: 258 LISKN 244
+KN
Sbjct: 324 FFNKN 328
>At5g50070.1 68418.m06200 invertase/pectin methylesterase inhibitor
family protein low similarity to pollen-specific protein
Bnm1 [Brassica napus] GI:1857671; contains Pfam profile
PF04043: Plant invertase/pectin methylesterase inhibitor
Length = 183
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 283 AVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDS 387
A K+ N K +P L T+ CQ+ F++ GDS
Sbjct: 82 AKKSASFANGAAKKEPSLKTQFQTCQEAFVSIGDS 116
>At1g69830.1 68414.m08034 alpha-amylase, putative /
1,4-alpha-D-glucan glucanohydrolase, putative similar to
SP|P17859 Alpha-amylase precursor (EC 3.2.1.1)
(1,4-alpha-D-glucan glucanohydrolase) {Vigna mungo},
alpha-amylase [Malus x domestica] GI:7532799; contains
Pfam profile PF00128: Alpha amylase, catalytic domain
Length = 887
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +3
Query: 21 WPRASCSPARLLMVTDGGDKLTRRQRKMKAWNKNYARTRTPANGSGWWPARATT 182
W A+ A VT G T Q K + W + + + P GWWP+RA T
Sbjct: 717 WINATSGAAGAFDVTTKGILHTALQ-KCEYWRLSDPKGKPPGV-VGWWPSRAVT 768
>At5g12120.1 68418.m01423 ubiquitin-associated (UBA)/TS-N
domain-containing protein contains Pfam profile PF00627:
UBA/TS-N domain
Length = 619
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 120 NYARTRTPANGSGWWPARATTVATSSSVLP 209
N + T A GSGW PA + A S+ LP
Sbjct: 421 NASFTGAAAAGSGWHPANRSEAAQSNGYLP 450
>At5g09410.1 68418.m01090 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from [Nicotiana tabacum]
Length = 1007
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 541 SWKQKQSGKDTCEESHGGALFGSLSISQRIFIRSIANSPFRR 416
+W++K+ GK T E+H GS+ + + AN F+R
Sbjct: 77 NWRKKKDGK-TIREAHEKLKVGSIDVLHCYYAHGEANENFQR 117
>At3g54570.1 68416.m06038 calmodulin-binding protein-related
contains similarity to potato calmodulin-binding protein
PCBP GI:17933110 from [Solanum tuberosum]
Length = 417
Score = 27.1 bits (57), Expect = 9.0
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +1
Query: 259 KQTCDWKDAVKNCKLKNKERKIKPLLYTEEPLCQDGFLACGDSTCIE 399
K+ DWK+A K KER IK +L TEE L C CIE
Sbjct: 301 KEAEDWKEADGE---KVKER-IKLVLKTEEALLSLAQKPCNREECIE 343
>At2g19240.1 68415.m02246 RabGAP/TBC domain-containing protein low
similarity to SP|Q08484 GTPase-activating protein GYP1
{Saccharomyces cerevisiae}; contains Pfam profile
PF00566: TBC domain
Length = 840
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -3
Query: 542 VLEAEAVRKGHMRGIAWRSSIWVVVNITKNFHQIHRQQSFSPLQKR 405
VL E R ++RG+ WR ++ V+ ++ + + R + S ++R
Sbjct: 18 VLSREDRRFANLRGVRWRVNLGVLPSLASSIDEFRRAAANSRRRRR 63
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,178,192
Number of Sequences: 28952
Number of extensions: 282396
Number of successful extensions: 931
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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