Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0070
         (574 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    24   3.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   4.0  
AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    24   4.0  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   5.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.3  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   9.3  

>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -3

Query: 218 DKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKK 39
           D+V  E  R+       +   T+P KV   N+ +EP      + +  I    SI  DP++
Sbjct: 363 DQVINETLRMYPPVPQLIRVTTQPYKVEGANVSLEPDTM-LMIPIYAIHHDASIYPDPER 421


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 403  TASCKSNWFSSLYIVYYRFRIYNFL 477
            +ASC+  W S +Y      R+++F+
Sbjct: 3200 SASCEGEWSSLVYTAKETARVFDFV 3224


>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical protein
           protein.
          Length = 195

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 219 LLWLHQFTFHRLAPCTTAIPASTGAAITA 305
           + W   ++F  L+P TT +  ++G A ++
Sbjct: 26  IFWFLPWSFPALSPTTTTLATTSGTAASS 54


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
 Frame = -3

Query: 341 GRYKESCKNWASRCDR-SSCTRWYGSSTGSQA 249
           GRY E C   A RC+    C +     TG  A
Sbjct: 668 GRYCEKCPTCAGRCNEFKHCVQCQQYKTGPLA 699



 Score = 22.6 bits (46), Expect = 9.3
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -1

Query: 328 KAAKIGLV-AVIAAPVLAGMAVV 263
           K   +G+V AVIA  VL GMAV+
Sbjct: 765 KVFMLGIVLAVIAVVVLIGMAVL 787


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 433 SLYIVYYRFRIYNFLSK 483
           SLY  Y RFR   +LSK
Sbjct: 442 SLYCSYNRFRYRRYLSK 458


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -3

Query: 152 EPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEIT 3
           E +K   R    +  +KDAK  V       S+     + + +EK K ++T
Sbjct: 259 EIQKAQDRLKNAQKALKDAKKDVVTAKDEKSVLATEHQQLLREKTKLDLT 308


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,086
Number of Sequences: 2352
Number of extensions: 10023
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)