BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0070 (574 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g10660.1 68416.m01282 calcium-dependent protein kinase isofor... 35 0.034 At4g23980.1 68417.m03447 auxin-responsive factor (ARF9) contains... 33 0.18 At1g22275.1 68414.m02784 expressed protein 32 0.31 At1g73200.1 68414.m08471 expressed protein 31 0.72 At5g35200.1 68418.m04171 epsin N-terminal homology (ENTH) domain... 30 0.95 At1g61400.1 68414.m06919 S-locus protein kinase, putative simila... 30 1.3 At1g55350.4 68414.m06326 calpain-type cysteine protease family i... 30 1.3 At1g55350.3 68414.m06325 calpain-type cysteine protease family i... 30 1.3 At1g55350.2 68414.m06324 calpain-type cysteine protease family i... 30 1.3 At1g55350.1 68414.m06323 calpain-type cysteine protease family i... 30 1.3 At4g11870.1 68417.m01888 hypothetical protein 29 1.7 At3g57660.1 68416.m06424 DNA-directed RNA polymerase family prot... 28 3.8 At3g17270.1 68416.m02208 F-box family protein 28 3.8 At5g44345.1 68418.m05430 F-box family protein-related contains T... 28 5.1 At5g17830.1 68418.m02090 hypothetical protein contains Pfam doma... 28 5.1 At5g25580.1 68418.m03044 expressed protein 27 6.7 At3g48520.1 68416.m05296 cytochrome P450 family protein similar ... 27 6.7 At5g04870.1 68418.m00510 calcium-dependent protein kinase isofor... 27 8.9 At4g31900.1 68417.m04533 chromatin remodeling factor, putative s... 27 8.9 At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ... 27 8.9 At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG ... 27 8.9 At2g24050.1 68415.m02873 MIF4G domain-containing protein / MA3 d... 27 8.9 At1g58190.1 68414.m06605 leucine-rich repeat family protein cont... 27 8.9 At1g17130.1 68414.m02087 cell cycle control protein-related cont... 27 8.9 >At3g10660.1 68416.m01282 calcium-dependent protein kinase isoform 2 (CPK2) identical to calcium-dependent protein kinase isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048 Length = 646 Score = 35.1 bits (77), Expect = 0.034 Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = -3 Query: 269 SSTGS-QAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAK 93 SS G+ Q K +P D+V +P +++ + T P+ ++ ++E++P+ K K Sbjct: 36 SSHGNGQVSKEAASEPATDQVQNKPPEPITMPSSK----TNPETKLKPDLEIQPEEKKEK 91 Query: 92 VSVKDIPSRPSISEDPKKDVSKEKLKTEI 6 V ++ + + E+ K++V E+ K E+ Sbjct: 92 VLAEETKQK-VVPEESKQEVPPEESKREV 119 >At4g23980.1 68417.m03447 auxin-responsive factor (ARF9) contains Pfam profiles: PF02309 AUX/IAA family and PF02362: B3 DNA binding domain Length = 638 Score = 32.7 bits (71), Expect = 0.18 Identities = 21/79 (26%), Positives = 39/79 (49%) Frame = -3 Query: 260 GSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVK 81 G + S L P++ P R +++ K T+D ++PK I + + E K + A+ S K Sbjct: 457 GIDLMSSSLAVPEEKTA---PMRPINISKPTMDSHSDPKSEISK-VSEEKKQEPAEGSPK 512 Query: 80 DIPSRPSISEDPKKDVSKE 24 ++ S+ S S + V + Sbjct: 513 EVQSKQSSSTRSRTKVQMQ 531 >At1g22275.1 68414.m02784 expressed protein Length = 856 Score = 31.9 bits (69), Expect = 0.31 Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%) Frame = -3 Query: 266 STGSQAVKSKLMQPKQDK--VFEEPSRIVSVDKATVDKVT-EPKKVIQRNIEVEPKVKDA 96 S+G++ + K+++ + DK + + S + T+DK+ E K ++ +N E E + Sbjct: 359 SSGNE-LSEKIVELQNDKESLISQLSGVRCSASQTIDKLEFEAKGLVLKNAETESVISKL 417 Query: 95 KVSVKDIPSRPSISEDPKKDVSKEKLKTEI 6 K + + SED KK++S + EI Sbjct: 418 KEEIDTLLESVRTSEDKKKELSIKLSSLEI 447 >At1g73200.1 68414.m08471 expressed protein Length = 779 Score = 30.7 bits (66), Expect = 0.72 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = -3 Query: 221 QDKVFEEPSRIVSVDKATVDKVTEPKKVIQR-NIEVEPKVKDAKVSVKDIPSRPSISEDP 45 QD + + + K+ DK +++ + NI +P++++ VS PS SI+ Sbjct: 622 QDSTSDRENLEAAEAKSKADKPPTSEQMQKTVNIPQKPRIEEESVSADTAPSANSIALLV 681 Query: 44 KKDVSKEKLKTEI 6 + D S E+LKT + Sbjct: 682 ESDKSLEELKTPL 694 >At5g35200.1 68418.m04171 epsin N-terminal homology (ENTH) domain-containing protein contains Pfam PF01417: ENTH domain. ENTH (Epsin N-terminal homology) domain; similar to clathrin assembly protein short form, Rattus norvegicus, EMBL:AF041373;similar to Chain A, Calm-N N-Terminal Domain Of Clathrin Assembly Lymphoid Myeloid Leukaemia Protein, Pi(4,5)p2 Complex (GP:13399999) {Homo sapiens} Length = 544 Score = 30.3 bits (65), Expect = 0.95 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%) Frame = -3 Query: 242 SKLMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRP 63 + +Q ++ V E P + V+K+T PK+++ E+ PKV V++ P+ P Sbjct: 290 TSFLQAMEEYVKEAPLAAGVKKEQVVEKLTAPKEILAIEYEIPPKV------VEEKPASP 343 Query: 62 S-ISEDPKKDVSKE 24 + + +K V K+ Sbjct: 344 EPVKAEAEKPVEKQ 357 >At1g61400.1 68414.m06919 S-locus protein kinase, putative similar to KI domain interacting kinase 1 [Zea mays] gi|2735017|gb|AAB93834; contains S-locus glycoprotein family domain, Pfam:PF00954 Length = 821 Score = 29.9 bits (64), Expect = 1.3 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +3 Query: 207 KHLVLLWLHQFTFHRLAPCTTAIPASTGAAITATSPIFAAFFISTN 344 K +VLLWL F A T P S G +++++ ++ F S N Sbjct: 18 KRVVLLWLSIFISFSSAEITEESPLSIGQTLSSSNGVYELGFFSFN 63 >At1g55350.4 68414.m06326 calpain-type cysteine protease family identical to calpain-like protein GI:20268660 from [Arabidopsis thaliana]; contains Pfam profiles: PF00648 Calpain family cysteine protease, PF01067 Calpain large subunit,domain III; identical to cDNA calpain-like protein GI:20268659 Length = 2151 Score = 29.9 bits (64), Expect = 1.3 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 10/93 (10%) Frame = +1 Query: 151 SVTLSTVALSTDTILLGSSNTLSCFG-CINLL--------FTAWLPVLLPYQRVQELRSQ 303 SV LS LS ++LLG S T+ C+++ + W+P L + ++LRS Sbjct: 698 SVGLSLSFLSKSSVLLGISLTVPLMAACLSIAVPIWMHNGYQFWVPQLSCGDQARDLRSP 757 Query: 304 RLAQFLQLSLYLPIYLF*GS-FNWPVLMSINPI 399 R+ F+ L++ + LF GS + ++S P+ Sbjct: 758 RIKGFI---LWICVVLFAGSVISLGAIISAKPL 787 >At1g55350.3 68414.m06325 calpain-type cysteine protease family identical to calpain-like protein GI:20268660 from [Arabidopsis thaliana]; contains Pfam profiles: PF00648 Calpain family cysteine protease, PF01067 Calpain large subunit,domain III; identical to cDNA calpain-like protein GI:20268659 Length = 2151 Score = 29.9 bits (64), Expect = 1.3 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 10/93 (10%) Frame = +1 Query: 151 SVTLSTVALSTDTILLGSSNTLSCFG-CINLL--------FTAWLPVLLPYQRVQELRSQ 303 SV LS LS ++LLG S T+ C+++ + W+P L + ++LRS Sbjct: 698 SVGLSLSFLSKSSVLLGISLTVPLMAACLSIAVPIWMHNGYQFWVPQLSCGDQARDLRSP 757 Query: 304 RLAQFLQLSLYLPIYLF*GS-FNWPVLMSINPI 399 R+ F+ L++ + LF GS + ++S P+ Sbjct: 758 RIKGFI---LWICVVLFAGSVISLGAIISAKPL 787 >At1g55350.2 68414.m06324 calpain-type cysteine protease family identical to calpain-like protein GI:20268660 from [Arabidopsis thaliana]; contains Pfam profiles: PF00648 Calpain family cysteine protease, PF01067 Calpain large subunit,domain III; identical to cDNA calpain-like protein GI:20268659 Length = 2151 Score = 29.9 bits (64), Expect = 1.3 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 10/93 (10%) Frame = +1 Query: 151 SVTLSTVALSTDTILLGSSNTLSCFG-CINLL--------FTAWLPVLLPYQRVQELRSQ 303 SV LS LS ++LLG S T+ C+++ + W+P L + ++LRS Sbjct: 698 SVGLSLSFLSKSSVLLGISLTVPLMAACLSIAVPIWMHNGYQFWVPQLSCGDQARDLRSP 757 Query: 304 RLAQFLQLSLYLPIYLF*GS-FNWPVLMSINPI 399 R+ F+ L++ + LF GS + ++S P+ Sbjct: 758 RIKGFI---LWICVVLFAGSVISLGAIISAKPL 787 >At1g55350.1 68414.m06323 calpain-type cysteine protease family identical to calpain-like protein GI:20268660 from [Arabidopsis thaliana]; contains Pfam profiles: PF00648 Calpain family cysteine protease, PF01067 Calpain large subunit,domain III; identical to cDNA calpain-like protein GI:20268659 Length = 2151 Score = 29.9 bits (64), Expect = 1.3 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 10/93 (10%) Frame = +1 Query: 151 SVTLSTVALSTDTILLGSSNTLSCFG-CINLL--------FTAWLPVLLPYQRVQELRSQ 303 SV LS LS ++LLG S T+ C+++ + W+P L + ++LRS Sbjct: 698 SVGLSLSFLSKSSVLLGISLTVPLMAACLSIAVPIWMHNGYQFWVPQLSCGDQARDLRSP 757 Query: 304 RLAQFLQLSLYLPIYLF*GS-FNWPVLMSINPI 399 R+ F+ L++ + LF GS + ++S P+ Sbjct: 758 RIKGFI---LWICVVLFAGSVISLGAIISAKPL 787 >At4g11870.1 68417.m01888 hypothetical protein Length = 74 Score = 29.5 bits (63), Expect = 1.7 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +3 Query: 252 LAPCTTAIPASTGAAITATSPIFAAFFISTNLPVL 356 + P TT +PA T A T T+P A ++ P + Sbjct: 39 VTPTTTVVPAITSATTTVTAPTMAVTPVTMGTPTM 73 >At3g57660.1 68416.m06424 DNA-directed RNA polymerase family protein similar to SP|O35134 DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6) (RNA polymerase I 194 kDa subunit) (RPA194) {Mus musculus}; contains InterPro accession IPR000722: RNA polymerase, alpha subunit Length = 1670 Score = 28.3 bits (60), Expect = 3.8 Identities = 22/80 (27%), Positives = 39/80 (48%) Frame = -3 Query: 260 GSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVK 81 GS A K K Q + +EE S + + +++ V +P E++ + +D +VS + Sbjct: 1354 GSDAQKQK-KQETDEMDYEENSEDETNEPSSISGVEDP--------EMDSENEDTEVSKE 1404 Query: 80 DIPSRPSISEDPKKDVSKEK 21 D P S +P+K+V K Sbjct: 1405 DTPEPQEESMEPQKEVKGVK 1424 >At3g17270.1 68416.m02208 F-box family protein Length = 134 Score = 28.3 bits (60), Expect = 3.8 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = -3 Query: 296 RSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSRI--VSVDKATVDKVTEPKKVIQRNI 123 ++ C RWY + VK L + ++ + R+ +SV++ +D EP + Sbjct: 28 KTICKRWYALFRDPRFVKKNLCKSAREVMLLMNDRVHSISVNRHGIDDRFEPSMEFSGKL 87 Query: 122 EVEPKVKDAKVS 87 KD KVS Sbjct: 88 RSLIDSKDVKVS 99 >At5g44345.1 68418.m05430 F-box family protein-related contains TIGRFAM TIGR01640 : F-box protein interaction domain Length = 181 Score = 27.9 bits (59), Expect = 5.1 Identities = 11/40 (27%), Positives = 22/40 (55%) Frame = +3 Query: 33 DIFLRILGYARPRRNILNTYFSIFHFWFYFNITLNYFFRL 152 D +LR++G + +L T +++ + FY+N+ RL Sbjct: 133 DAYLRLVGVTQRNEIVLATCYAVPFYLFYYNMERKTIIRL 172 >At5g17830.1 68418.m02090 hypothetical protein contains Pfam domain, PF04515: Protein of unknown function, DUF580 Length = 474 Score = 27.9 bits (59), Expect = 5.1 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +3 Query: 231 HQFTFHRLAPCTTAIPASTGAAITATSPIFAAFF 332 H+FTF ++ T +PA T AI S I + F+ Sbjct: 175 HEFTFQTMSTATGILPART-RAIAVVSVIISVFY 207 >At5g25580.1 68418.m03044 expressed protein Length = 405 Score = 27.5 bits (58), Expect = 6.7 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = -2 Query: 486 ALAKKIIDPESVIYNVEAAKPVTFTRSCKNRV 391 A+ KK+ E ++ NV ++P+ TRSC+N + Sbjct: 286 AIKKKM--KEEMVVNVNFSRPLRTTRSCRNHM 315 >At3g48520.1 68416.m05296 cytochrome P450 family protein similar to Cytochrome P450 94A1 (P450-dependent fatty acid omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains Pfam profile: PF00067 cytochrome P450 Length = 506 Score = 27.5 bits (58), Expect = 6.7 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = -3 Query: 314 WASRCDRSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSRI-VSVDKATVDKVTEPKKV 138 W + + + RW+ S GS K + P + VF+ R+ V + A + V Sbjct: 405 WGTDSEEFNPNRWFDSEPGSTRPVLKPISPYKFPVFQAGPRVCVGKEMAFMQMKYVVGSV 464 Query: 137 IQRNIEVEPKVKDAKVSV 84 + R E+ P KD V V Sbjct: 465 LSR-FEIVPVNKDRPVFV 481 >At5g04870.1 68418.m00510 calcium-dependent protein kinase isoform AK1 (AK1) identical to calcium-dependent protein kinase, isoform AK1 (CDPK) [Arabidopsis thaliana] SWISS-PROT:Q06850; contains protein kinase domain, Pfam:PF00069; contains EF hand domain (calcium-binding EF-hand), Pfam:PF00036, INTERPRO:IPR002048 Length = 610 Score = 27.1 bits (57), Expect = 8.9 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 14/120 (11%) Frame = -3 Query: 326 SCKNWASRCDRSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTE- 150 S W R S + G S+AV +L D+V +P V++ K D T+ Sbjct: 18 SAAMWRPRDGDDSASMSNGD-IASEAVSGELRSRLSDEVQNKPPEQVTMPKPGTDVETKD 76 Query: 149 --------PKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKD-----VSKEKLKTE 9 P+ + + ++E +P+ K S S+P PKK VS L+TE Sbjct: 77 REIRTESKPETLEEISLESKPETKQETKSETKPESKPDPPAKPKKPKHMKRVSSAGLRTE 136 >At4g31900.1 68417.m04533 chromatin remodeling factor, putative strong similarity to chromatin remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana] GI:6478518; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain Length = 1202 Score = 27.1 bits (57), Expect = 8.9 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = -3 Query: 221 QDKVFEEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVS 87 +DKV + I+ VD ++ K K VI N +V K +DAK+S Sbjct: 443 KDKVPPKKELILRVDMSSQQKEVY-KAVITNNYQVLTKKRDAKIS 486 >At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar protein NAP57) {Rattus norvegicus}; contains Pfam profiles PF01509: TruB family pseudouridylate synthase (N terminal domain), PF01472: PUA domain; supporting cDNA gi|8901185|gb|AF234984.2|AF234984 Length = 565 Score = 27.1 bits (57), Expect = 8.9 Identities = 24/108 (22%), Positives = 46/108 (42%) Frame = -3 Query: 338 RYKESCKNWASRCDRSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDK 159 ++ +S + A + S T+ + VKS + K+DK E+ S K K Sbjct: 443 KHDDSSDSPAPVTTKKSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKKK 502 Query: 158 VTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLK 15 + ++VI+ + + K K S KD + ++ + S++K K Sbjct: 503 KDKKEEVIEEVASPKSEKKKKKKS-KDTEAAVDAEDESAAEKSEKKKK 549 >At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG binding domain-containing protein contains Pfam profiles PF00628: PHD-finger (2 copies), PF01429: Methyl-CpG binding domain Length = 2176 Score = 27.1 bits (57), Expect = 8.9 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = -3 Query: 329 ESCKNWASRCDRSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSR 192 ESC N+ + RSS + + G+ VK K + +D+VF E SR Sbjct: 689 ESCTNYRTLKSRSSSSVPITVAEGALVVKPKGGENVKDEVFGEISR 734 >At2g24050.1 68415.m02873 MIF4G domain-containing protein / MA3 domain-containing protein similar to SP|Q03387 Eukaryotic initiation factor (iso)4F subunit P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam profiles PF02854: MIF4G domain, PF02847: MA3 domain Length = 747 Score = 27.1 bits (57), Expect = 8.9 Identities = 15/79 (18%), Positives = 33/79 (41%) Frame = -3 Query: 326 SCKNWASRCDRSSCTRWYGSSTGSQAVKSKLMQPKQDKVFEEPSRIVSVDKATVDKVTEP 147 S K W R + + W GS +K+++ + + R+V K ++K+T Sbjct: 129 SGKEWLRDDPREAKSTWQGSGPTPVLIKAEVPWSAKRGALSDKDRVVKSVKGILNKLTPE 188 Query: 146 KKVIQRNIEVEPKVKDAKV 90 K + + ++ + A + Sbjct: 189 KYELLKGQLIDAGITSADI 207 >At1g58190.1 68414.m06605 leucine-rich repeat family protein contains leucine rich-repeat (LRR) domains Pfam:PF00560, INTERPRO:IPR001611; contains similarity to Cf-2.2 [Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780 Length = 1784 Score = 27.1 bits (57), Expect = 8.9 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = +3 Query: 135 NYFFRLCNLVNSRFINGHNSTWFLKHLVLLWLHQFTFHRLAPCT 266 N F+L +L ++F S + +H+ LL+LH F P T Sbjct: 560 NVSFQLLDLSRNKFSGNLPSHFSFRHMGLLYLHDNEFSGPVPST 603 >At1g17130.1 68414.m02087 cell cycle control protein-related contains similarity to Swiss-Prot:Q9P7C5 cell cycle control protein cwf16 [Schizosaccharomyces pombe] Length = 331 Score = 27.1 bits (57), Expect = 8.9 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Frame = -3 Query: 206 EEPSRIVSVDKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPK---KD 36 E+ RI D+A + + +K + R I E D DI PS+ ++ K D Sbjct: 182 EKVKRIEEEDEAVIKSIFGKQKEVIRRIADEEI--DDDYDDDDIDDYPSLQKEKKGSSSD 239 Query: 35 VSKEKLKTEIT 3 +SK++ TE++ Sbjct: 240 LSKKRKATEVS 250 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,966,935 Number of Sequences: 28952 Number of extensions: 211970 Number of successful extensions: 758 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 734 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 757 length of database: 12,070,560 effective HSP length: 77 effective length of database: 9,841,256 effective search space used: 1112061928 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -