Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0068
(532 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8759| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_9887| Best HMM Match : Pkinase (HMM E-Value=4.1e-37) 56 2e-08
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_35776| Best HMM Match : Pkinase (HMM E-Value=0) 48 6e-06
SB_19149| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_5779| Best HMM Match : Pkinase (HMM E-Value=1.8e-19) 40 0.001
SB_40475| Best HMM Match : Pkinase (HMM E-Value=6.5e-05) 36 0.027
SB_17500| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.036
SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.036
SB_12255| Best HMM Match : Pkinase (HMM E-Value=0) 35 0.047
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 34 0.063
SB_13192| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.063
SB_42686| Best HMM Match : Pkinase (HMM E-Value=0) 33 0.19
SB_32748| Best HMM Match : Pkinase (HMM E-Value=7.8e-26) 33 0.19
SB_42409| Best HMM Match : Pkinase (HMM E-Value=6.7e-24) 31 0.58
SB_9281| Best HMM Match : Lsm_interact (HMM E-Value=6.7) 31 0.58
SB_54204| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_34326| Best HMM Match : CRAL_TRIO (HMM E-Value=0.1) 30 1.0
SB_6979| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_57581| Best HMM Match : Pkinase (HMM E-Value=4.7e-24) 30 1.4
SB_31087| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-32) 30 1.4
SB_26437| Best HMM Match : Pkinase (HMM E-Value=3.6e-36) 30 1.4
SB_4088| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_36661| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_23622| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19) 29 3.1
SB_42736| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24) 28 5.4
SB_22476| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 28 5.4
SB_19397| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_23583| Best HMM Match : TSP_1 (HMM E-Value=0.095) 28 5.4
SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38) 28 5.4
SB_35522| Best HMM Match : AT_hook (HMM E-Value=7.3) 27 7.2
SB_30262| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_48047| Best HMM Match : Phage_QLRG (HMM E-Value=5.3) 27 7.2
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_709| Best HMM Match : RVT_1 (HMM E-Value=0.0021) 27 7.2
SB_42106| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 9.5
SB_30875| Best HMM Match : Rubredoxin (HMM E-Value=1.6) 27 9.5
SB_13651| Best HMM Match : I-set (HMM E-Value=4e-17) 27 9.5
SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14) 27 9.5
SB_41939| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_8759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 69.3 bits (162), Expect = 2e-12
Identities = 37/96 (38%), Positives = 52/96 (54%)
Frame = -2
Query: 531 DYIAPEVFFQDWVRPLQRTGEASGVIMYEMLIGYPPFLLRITPGDDRKVMSWRESLTFPP 352
+YIAPEV + R + GVI+YEML+G PPFL K+++W L P
Sbjct: 876 NYIAPEVLLRIGYRQ-SCDWWSVGVILYEMLVGQPPFLAPTPAETQLKIINWETELRIPH 934
Query: 351 EVPISEEARETILRFCSEPDRRLGSQRGIEDVSRCP 244
+ +S EA++ ILR C+ D RLGS G ++ P
Sbjct: 935 QARLSREAKDLILRLCTNADMRLGS-NGASEIKAHP 969
>SB_9887| Best HMM Match : Pkinase (HMM E-Value=4.1e-37)
Length = 256
Score = 55.6 bits (128), Expect = 2e-08
Identities = 36/74 (48%), Positives = 42/74 (56%)
Frame = -2
Query: 531 DYIAPEVFFQDWVRPLQRTGEASGVIMYEMLIGYPPFLLRITPGDDRKVMSWRESLTFPP 352
DYIAPEVF Q + GVIMYEMLI +KVM+WRE+L FPP
Sbjct: 193 DYIAPEVFIQQGYTK-SCDFWSLGVIMYEMLIE-----------TYKKVMNWRETLVFPP 240
Query: 351 EVPISEEARETILR 310
E+PIS AR+ I R
Sbjct: 241 EMPISPNARDLISR 254
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/68 (38%), Positives = 36/68 (52%)
Frame = -2
Query: 462 GVIMYEMLIGYPPFLLRITPGDDRKVMSWRESLTFPPEVPISEEARETILRFCSEPDRRL 283
GV MYEML G PF K+M+ +P +V IS A++ + R C + +RL
Sbjct: 236 GVCMYEMLFGETPFYAESLLETYSKIMAHTGKFNYPSDVEISNNAKDLMQRLCCKASQRL 295
Query: 282 GSQRGIED 259
G Q G+ED
Sbjct: 296 G-QNGMED 302
Score = 27.5 bits (58), Expect(2) = 1.2
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = -1
Query: 256 KSVSFFRGVDWS--HVRERPAAISVEVRSID 170
K+ SFF G+DW H R + I R+ID
Sbjct: 304 KNHSFFEGIDWEGIHYRTKALKIHYTFRAID 334
Score = 21.0 bits (42), Expect(2) = 1.2
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -1
Query: 187 EVRSIDDTSNFD-DFPDVKLEIPAAPT 110
EV S DTSNFD D + K P+
Sbjct: 355 EVSSPTDTSNFDVDIEESKANEATRPS 381
>SB_35776| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 558
Score = 47.6 bits (108), Expect = 6e-06
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = -2
Query: 462 GVIMYEMLIGYPPFLLRITPGDDRKVMSWRESLTFPPEVPISEEARETILRFCSEPDRRL 283
GV+ YEML G PF K+M+++ SL FP E ISE+A+E I + + R+
Sbjct: 273 GVVAYEMLFGQTPFEADSVVVTYSKIMNFKSSLRFPSEPKISEDAKELIHNLLTSSEGRI 332
Query: 282 G 280
G
Sbjct: 333 G 333
>SB_19149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/28 (60%), Positives = 25/28 (89%)
Frame = -1
Query: 211 ERPAAISVEVRSIDDTSNFDDFPDVKLE 128
+RPAA+ ++V+SIDDTSNFD+FP+ L+
Sbjct: 2 DRPAALPIQVKSIDDTSNFDEFPETDLD 29
>SB_5779| Best HMM Match : Pkinase (HMM E-Value=1.8e-19)
Length = 284
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Frame = -2
Query: 531 DYIAPEVFFQDWVRPLQRTGEASGVIMYEMLIGYPPFL-----LRITPGDDRKVMSWRES 367
D + P+ F +V P + GV++Y ML GYPPF +++ G R++M+ S
Sbjct: 75 DLVTPQ-FTPYYVSPQSCDMWSLGVVIYIMLCGYPPFYSEVPRKQLSQGMRRRIMAGEYS 133
Query: 366 LTFPPEVPISEEARETILR-FCSEPDRRLGSQRGIE 262
IS EA++ I + C EP +RL +E
Sbjct: 134 FPEQEWSKISLEAKDVISKLLCVEPGQRLSINELLE 169
>SB_40475| Best HMM Match : Pkinase (HMM E-Value=6.5e-05)
Length = 238
Score = 35.5 bits (78), Expect = 0.027
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -2
Query: 462 GVIMYEMLIGYPPFLLRITPGDDRKVMSWRESLTFPPEVPISEEARETILRFCSE-PDRR 286
G++MYE+L G PPF ++ + + FP + I+ A I + C + P R
Sbjct: 113 GILMYELLTGSPPFSGTDPMKTYNIILKGIDMIDFPRK--ITRNAHALIKKLCRDNPVER 170
Query: 285 LGSQR-GIEDVSR 250
LG Q+ G++D+ +
Sbjct: 171 LGYQKGGLKDIMK 183
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -1
Query: 244 FFRGVDWSHVRERP--AAISVEVRSIDDTSNFDDFP 143
+F G +W +R R + I+ +++S D SNFDD+P
Sbjct: 186 WFDGFNWDGLRSRKLNSPIAPKIKSPVDASNFDDYP 221
>SB_17500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 35.1 bits (77), Expect = 0.036
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Frame = -2
Query: 528 YIAPEVFFQDWVRPLQRTGE--ASGVIMYEMLIGYPPFLLRITPGDDRKVMS-WRESLTF 358
++APE ++ P+ R + A GVI Y +L+GYPPF + D++ ++S R T
Sbjct: 196 FLAPETVLEE---PIGRAVDIWACGVIFYLLLVGYPPFW---SNSDEQLLLSILRGQYTM 249
Query: 357 PPEV--PISEEARETILR-FCSEPDRRLGSQRGI 265
P +S +AR+ + + +P+ R+ ++ +
Sbjct: 250 PSPFWDNVSNDARDLVHKLIVVDPEARISAKEAL 283
>SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 35.1 bits (77), Expect = 0.036
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = -2
Query: 531 DYIAPEVFFQDWVRPLQRTGEASGVIMYEMLIGYPPF 421
DYIAPE+ Q+ A GV+MYEM+ G PPF
Sbjct: 483 DYIAPEIL-QEQPYGFSVDWWALGVLMYEMMAGQPPF 518
>SB_12255| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 476
Score = 34.7 bits (76), Expect = 0.047
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -2
Query: 528 YIAPEVFFQD-WVRPLQRTGEASGVIMYEMLIGYPPF 421
Y++PEV +D + +P+ A GVI+Y +L+GYPPF
Sbjct: 183 YLSPEVLKKDPYGKPVDLW--ACGVILYILLVGYPPF 217
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 34.3 bits (75), Expect = 0.063
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -2
Query: 531 DYIAPEVFFQDWVRPLQRTGEASGVIMYEMLIGYPPFLLRITPGDDRKVMSWRESLTFPP 352
+YIAPEV ++ + A G +MY ML+G+PPF + R++ + T P
Sbjct: 596 NYIAPEVLSKEG-HSYEVDTWALGCVMYTMLVGHPPFETKSLRETYRRIRN--NDYTIPS 652
Query: 351 EVPISEEARETILRFC-SEPDRR 286
V S+ A I R + P+ R
Sbjct: 653 RV--SDSAARLIQRMLHANPENR 673
>SB_13192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 34.3 bits (75), Expect = 0.063
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 531 DYIAPEVFFQDWVRPLQRTGEASGVIMYEMLIGYPPF 421
+Y+APE+ Q A G+++YEML+GYPPF
Sbjct: 201 EYLAPEII-QSKGHNKAVDWWALGILIYEMLVGYPPF 236
>SB_42686| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 759
Score = 32.7 bits (71), Expect = 0.19
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -2
Query: 528 YIAPEVFFQDWVRPLQRTGEASGVIMYEMLIGYPPFLLRITPGDD--RKVMSWRESLTFP 355
Y+APE+ ++ L+ A+GVI Y ML G+PPF D+ + S P
Sbjct: 610 YVAPEILEENGYG-LKVDMWAAGVITYIMLCGFPPFRSPNRDQDELFDLIQSGEFEFLSP 668
Query: 354 PEVPISEEARETI 316
P+S++A++ I
Sbjct: 669 YWDPVSDDAKDLI 681
>SB_32748| Best HMM Match : Pkinase (HMM E-Value=7.8e-26)
Length = 187
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -2
Query: 531 DYIAPEVFF-QDWVRPLQRTGEASGVIMYEMLIGYPPF 421
DY+APEV Q + R + + G+I+YE L+G PPF
Sbjct: 137 DYLAPEVILRQGYGRAVDWW--SMGIILYEFLMGVPPF 172
>SB_42409| Best HMM Match : Pkinase (HMM E-Value=6.7e-24)
Length = 465
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 531 DYIAPEVFF-QDWVRPLQRTGEASGVIMYEMLIGYPPFLLRIT 406
+Y+APEV QD+ + + G ++YEM+ G PPF R T
Sbjct: 282 EYLAPEVLRKQDYDKSVDWW--CLGAVLYEMMYGLPPFYSRDT 322
>SB_9281| Best HMM Match : Lsm_interact (HMM E-Value=6.7)
Length = 318
Score = 31.1 bits (67), Expect = 0.58
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +2
Query: 176 GAHFYGYSRRPLPDVRPVDAAEEGHRLTSSMPRCDPNLRSGSEQKRNIVSLASSLMGTSG 355
G+H + + R +PD R AE+ R+ + P C P + + ++ LAS G
Sbjct: 131 GSHDHDHRSRKIPDSRRNPVAEDHLRVFVTRPSCTP---ASVPRVFSLGDLASQCEGDEC 187
Query: 356 GKVKDSRQDITFLSSPGVIRSK 421
G+ S ++I+ L S S+
Sbjct: 188 GRKFSSAENISRLRSGSFFSSE 209
>SB_54204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 30.7 bits (66), Expect = 0.77
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 528 YIAPEVFFQDWVR-PLQRTGEASGVIMYEMLIGYPPF 421
Y+APE +D + P+ + GV+++ +++GYPPF
Sbjct: 41 YLAPETILEDPIGCPVDSW--SCGVLLHTLIVGYPPF 75
>SB_34326| Best HMM Match : CRAL_TRIO (HMM E-Value=0.1)
Length = 429
Score = 30.3 bits (65), Expect = 1.0
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 104 LAGWCGRYLELHVREIVEVGCVVYGAHFYGYSRRPLPDVRPVDAAEEGHRLTSSMPRCDP 283
L G R+LE + + V VV GA Y++ +P P D EE H LT DP
Sbjct: 98 LLGTVRRFLEKYGSAVDTVAFVVEGAEAVVYAK-VMPIYFPRDKLEEAHALTLMPDDIDP 156
Query: 284 N 286
+
Sbjct: 157 D 157
>SB_6979| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -2
Query: 468 ASGVIMYEMLIGYPPF 421
A GVI+Y +L+GYPPF
Sbjct: 119 ACGVILYILLVGYPPF 134
>SB_57581| Best HMM Match : Pkinase (HMM E-Value=4.7e-24)
Length = 235
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -2
Query: 528 YIAPEVFFQDWVRPLQRTGE--ASGVIMYEMLIGYPPF 421
Y+APEV Q +P + + + GVI Y +L GYPPF
Sbjct: 177 YVAPEVLKQ---QPYGKAVDCWSIGVITYILLCGYPPF 211
>SB_31087| Best HMM Match : Ldl_recept_a (HMM E-Value=4.2e-32)
Length = 1039
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +3
Query: 117 AAGISSFTSGKSSK--LDVSSMERTSTDIAAGRSLTCDQSTPRKKDTDLRLLCRAAIPIC 290
+A SS+T + + LD S+++ + + AA + + STP+ D+++L ++ I IC
Sbjct: 253 SAANSSYTVKATPQDCLDESALQMSKSVSAAVSTANVNTSTPQVPTDDIKILTKSEIEIC 312
Query: 291 DRVPNRNAISSLS 329
R+A +S
Sbjct: 313 PSGSIRSASPFIS 325
>SB_26437| Best HMM Match : Pkinase (HMM E-Value=3.6e-36)
Length = 436
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -2
Query: 462 GVIMYEMLIGYPPFLLRITPG---DDRKVMSWRESLTFPPEVPISEEARETILR 310
GVI Y+ML G PF T ++R ++ RE + FP + +S EA+ I R
Sbjct: 349 GVIFYQMLYGRKPFGHDQTQASILENRTILKARE-VEFPAKPVVSSEAKNFIRR 401
>SB_4088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 895
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 126 ISSFTSGKSSKLDVSSMERTSTDIAAGRSLTCDQSTPRKKDTDLRLLCR 272
+++F G S+KL ++M TS + L +TPR + + LCR
Sbjct: 319 VNNFLLGSSTKLPTTTMAVTSKGLYRDDGLAITNATPRATENLKKELCR 367
>SB_36661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -2
Query: 531 DYIAPEVF--FQDWVRPLQRTGE--ASGVIMYEMLIGYPPF 421
+Y+APEV F+ + + + GVI+Y ML GYPPF
Sbjct: 266 EYMAPEVVDAFKTQASTYDKKCDLWSLGVILYIMLSGYPPF 306
>SB_23622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 210 SLTCDQSTPRKKDTDLRLLCRAAIPICDR--VPNRNAISSLSLPR 338
SLT + R K+T +RLL R A+P+ R +P ++ L +PR
Sbjct: 7 SLTIHFNERRAKETHVRLLHRCALPLTTRSQIPVPRSLFPLPVPR 51
>SB_16428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1005
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = -3
Query: 173 RRHIQLRRFPGREARDTCRTNQPRRRSSVQRLGVHKLHVQTFRRPHPARDAHKEMRP 3
RR I+ RR PG ARD R + ++ G+H+ T RR P R H E++P
Sbjct: 865 RRVIRRRRRPGHSARDQKRASWSFEKAKPDIDGLHR----TMRRERP-RSLH-EIKP 915
>SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)
Length = 851
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 244 FFRGVDWSHVRERPAAISVEVRSIDDTSNFD 152
FF G+DW+ + + A ++ DDTS FD
Sbjct: 144 FFTGLDWTALLRQKAEFIPQLDGEDDTSYFD 174
>SB_42736| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -1
Query: 358 PPRGSHQRGSERDDIAFLFGTRSQIGIAA 272
PP G R +R DIA FGTRS G+A+
Sbjct: 45 PPLGLADR-VQRKDIANTFGTRSTAGVAS 72
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -1
Query: 292 SQIGIAARHRRRK--SVSFFRGVDWSHVRERPAAISVEVRSIDDTSNFD 152
S +G R R RK +V+ +DW H + A +SV R I+D +
Sbjct: 3126 SPVGATLRVRSRKFPAVTNCTAIDWFHEWPQEALVSVSRRFIEDLEQLE 3174
>SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24)
Length = 1001
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -1
Query: 265 RRRKSVSFF-RGVDWSHVRER 206
R+R SV F +G DWSHV+ R
Sbjct: 790 RKRNSVKIFNKGHDWSHVQSR 810
>SB_22476| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 269
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 503 KTGYGPCSGLVKPRGSLCTKC*SATRRFCSESPQETTEKLC 381
KT PC+ + LC + TR+ C+++ TT KLC
Sbjct: 26 KTTRKPCAQNTQTTRKLCAQNTQTTRKLCAQNTL-TTRKLC 65
>SB_19397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +1
Query: 334 LADGNLGGESQGFTPGHNFSVVSWGDSEQKRRVADQHFVHNDPRGFTSPLQG 489
L D + +++ F GHNF VV S + D HF + + LQG
Sbjct: 11 LVDELVVDDTESFHRGHNFVVVRCDGSLVSNQTFDTHFDSHASTNLVNYLQG 62
>SB_23583| Best HMM Match : TSP_1 (HMM E-Value=0.095)
Length = 520
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 221 RPVDAAEEGHRLTSSMPRCDPNL 289
R V EGH LTSS P CD L
Sbjct: 161 RTVGRVWEGHTLTSSTPSCDEAL 183
>SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38)
Length = 501
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 528 YIAPEVFFQDWVRPLQRTGEASGVIMYEMLIGYPPFL 418
Y+APEV D Q + GVIMY + G PPF+
Sbjct: 152 YMAPEVI-DDLGYSQQCDVWSIGVIMYTLFTGRPPFM 187
>SB_35522| Best HMM Match : AT_hook (HMM E-Value=7.3)
Length = 250
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 182 HFYGYSRRPLPDVRPVDAAEEGHRLTSSMPRCDPNL 289
H Y +S PLP+ PV++ + R SS + L
Sbjct: 83 HLYEHSAEPLPEHTPVESRQRHDRTLSSKEKMSNEL 118
>SB_30262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = -2
Query: 462 GVIMYEMLIGYPPFLLRITPGDDRKVMSWRESLTFPPEVP--ISEEARETILRFC-SEPD 292
GV+MYE+L G PF + ++ + L P +P +S EA + + + +P
Sbjct: 163 GVLMYELLTGASPFTVDGEKNSQSEIS--KRILHNNPPMPHDLSAEAIDLLHKLLQKDPK 220
Query: 291 RRLGSQRGIEDVSRCP 244
+RLG+ +G ++ P
Sbjct: 221 KRLGA-KGAHELKAHP 235
>SB_48047| Best HMM Match : Phage_QLRG (HMM E-Value=5.3)
Length = 418
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +3
Query: 114 GAAGISSFTSGKSSKLDVSSMERTSTDIAAGRSLTCDQSTPRKKDTDLRLLCRAAIPICD 293
G A I + K + + E + + + S TCD S+ ++ R A +P+
Sbjct: 101 GIAYIEQYRGEKMKRHEAELNEFLTLNTSRKGSDTCDNSSKSQESIVARDKPNANVPVYT 160
Query: 294 RVPNRNAISSL 326
R P R + S L
Sbjct: 161 RKPRRESASPL 171
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 84 LYATSPSWLVGAAGISSFTSGKSSKLDVSSMERTSTDIAAGRSLTCDQSTPRKKD 248
LYAT + AGI S T+ K SK S D+ ++C +P K +
Sbjct: 6 LYATVLVSFLAFAGIQSVTAKKKSKKKSEGACIISQDVDGRYFVSCGAGSPEKSE 60
>SB_709| Best HMM Match : RVT_1 (HMM E-Value=0.0021)
Length = 921
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 122 RYLELHVREIVEV--GCVVYGAHFYGYSRRPLPDVRPVDAAEEGHRLTSSMPR 274
RY + RE++ V GC + A+ +G+S D +P+++ H LTS+ PR
Sbjct: 804 RYANIE-RELLAVVYGCERFHAYLFGHSFTVHSDHKPLESIHLKH-LTSAPPR 854
>SB_42106| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 929
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 176 HRRHIQLRRFPGREARDTCRTNQPRRRSSVQRLGVHKLH 60
++ L+ FPG R T R N+P+ + L +H H
Sbjct: 41 YKERNSLKYFPGNNNRHTIRENRPKFPIRCRYLRLHPYH 79
>SB_30875| Best HMM Match : Rubredoxin (HMM E-Value=1.6)
Length = 1130
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 185 SALHRRHIQLRRFPGREARDTCRTNQPRRRSSVQRLGVHKLH--VQTFRRPHPARD 24
+ +HR++ +LR GR+ + + ++ QR H V F+RP PARD
Sbjct: 801 ACVHRKYDELRAGEGRDREPSEVYDVIADDNATQRASAASDHYDVVEFKRPAPARD 856
>SB_13651| Best HMM Match : I-set (HMM E-Value=4e-17)
Length = 333
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 72 NTQSLYATSPSWLVGAAGISSFTSGKSSKLDVSSMER-TSTDIAAGR 209
++ S + S SW + +FTS SS LDV+ + T+T A+GR
Sbjct: 140 SSSSPLSPSASWDLNVKVAPAFTSSLSSSLDVAENDDVTNTCSASGR 186
>SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)
Length = 579
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 518 PKYSFKTGYGPCSGLVKPRGSLCT 447
P + + YGPC PRG +CT
Sbjct: 106 PCLAQRQAYGPCRDTFCPRGGVCT 129
>SB_41939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 431 TRRFCSESPQETTEKLCPGV 372
TRR SP+ET EKL GV
Sbjct: 16 TRRAAERSPEETREKLTSGV 35
>SB_34096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 27.1 bits (57), Expect = 9.5
Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Frame = +2
Query: 56 ERVVYEHPIFVRYFAFLAGWCGRYLELHVREIVEVGC--VVYGAHFYGYSRRPLPDVRPV 229
+R EH + Y A W + H + E+ C + +G F+ R L R
Sbjct: 182 KRARIEHYTTLMYLAIYHPWSA-VRDFHAAVLFEIECGRLRWGDSFHHVEARVLNQPRNS 240
Query: 230 DAAEEGHRLTSSMPRCDPNLRSGSEQKRNIVSLASSLMGTS 352
A +G S++ C P R + +++ S+ GT+
Sbjct: 241 ATAGQGGPQGSAVYFCSPYQRGQCTKSAPHMTMVSNESGTA 281
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,510,697
Number of Sequences: 59808
Number of extensions: 418267
Number of successful extensions: 1442
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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