BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0067 (646 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 8e-36 SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 2e-35 SB_56628| Best HMM Match : Actin (HMM E-Value=0) 146 2e-35 SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 4e-35 SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 5e-35 SB_56| Best HMM Match : Actin (HMM E-Value=0) 144 5e-35 SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 122 3e-28 SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 49 3e-06 SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04 SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 33 0.15 SB_47955| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46 SB_59400| Best HMM Match : UPF0160 (HMM E-Value=8.1) 31 0.80 SB_51456| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80 SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0) 31 0.80 SB_22893| Best HMM Match : SWIM (HMM E-Value=0.99) 31 0.80 SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_1159| Best HMM Match : 7tm_3 (HMM E-Value=1.4e-28) 29 3.2 SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 28 5.7 SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7 SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7 SB_51621| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5 SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5 SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9 >SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 349 Score = 147 bits (356), Expect = 8e-36 Identities = 78/119 (65%), Positives = 86/119 (72%) Frame = -3 Query: 638 PKRLLPNPRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRK 459 P+ LL P F ++ GIHE T DIRKDLYANTV+S +++ Sbjct: 232 PEALL-QPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKE 290 Query: 458 SQALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282 ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF Sbjct: 291 ISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349 >SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 375 Score = 146 bits (353), Expect = 2e-35 Identities = 76/112 (67%), Positives = 81/112 (72%) Frame = -3 Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438 P F ++ GIHE T DIRKDLYANTVLS +++ ALAP Sbjct: 264 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPP 323 Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF Sbjct: 324 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375 Score = 60.1 bits (139), Expect = 2e-09 Identities = 32/64 (50%), Positives = 39/64 (60%) Frame = -2 Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454 +A +PSF GMES NSIMKCDV L + GG+TM+PGIADRMQK+I+ Sbjct: 259 EAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEIS 318 Query: 453 GSRP 442 P Sbjct: 319 ALAP 322 >SB_56628| Best HMM Match : Actin (HMM E-Value=0) Length = 376 Score = 146 bits (353), Expect = 2e-35 Identities = 76/112 (67%), Positives = 81/112 (72%) Frame = -3 Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438 P F ++ GIHE T DIRKDLYANTVLS +++ ALAP Sbjct: 265 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPP 324 Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376 Score = 61.7 bits (143), Expect = 5e-10 Identities = 33/64 (51%), Positives = 39/64 (60%) Frame = -2 Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454 +A +PSF GMES NSIMKCDV L + GG+TMYPGIADRMQK+I+ Sbjct: 260 EAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIS 319 Query: 453 GSRP 442 P Sbjct: 320 ALAP 323 >SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 144 bits (350), Expect = 4e-35 Identities = 75/112 (66%), Positives = 81/112 (72%) Frame = -3 Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438 P F ++ GIHE T DIRKDLYANTVLS +++ ALAP Sbjct: 227 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPP 286 Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF Sbjct: 287 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338 Score = 63.3 bits (147), Expect = 2e-10 Identities = 34/64 (53%), Positives = 39/64 (60%) Frame = -2 Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454 +A +PSF GMES NSIMKCDV L + GGTTMYPGIADRMQK+I+ Sbjct: 222 EAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIS 281 Query: 453 GSRP 442 P Sbjct: 282 ALAP 285 >SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 144 bits (349), Expect = 5e-35 Identities = 75/112 (66%), Positives = 81/112 (72%) Frame = -3 Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438 P F ++ GIHE T DIRKDLYANTVLS +++ +LAP Sbjct: 265 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPP 324 Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376 Score = 63.3 bits (147), Expect = 2e-10 Identities = 34/64 (53%), Positives = 39/64 (60%) Frame = -2 Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454 +A +PSF GMES NSIMKCDV L + GG+TMYPGIADRMQK+IT Sbjct: 260 EAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIT 319 Query: 453 GSRP 442 P Sbjct: 320 SLAP 323 >SB_56| Best HMM Match : Actin (HMM E-Value=0) Length = 375 Score = 144 bits (349), Expect = 5e-35 Identities = 75/112 (66%), Positives = 81/112 (72%) Frame = -3 Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438 P F ++ GIHE T DIRKDLYANTVLS +++ +LAP Sbjct: 264 PSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPP 323 Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF Sbjct: 324 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375 Score = 63.3 bits (147), Expect = 2e-10 Identities = 34/64 (53%), Positives = 39/64 (60%) Frame = -2 Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454 +A +PSF GMES NSIMKCDV L + GG+TMYPGIADRMQK+IT Sbjct: 259 EAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIT 318 Query: 453 GSRP 442 P Sbjct: 319 SLAP 322 >SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) Length = 149 Score = 122 bits (293), Expect = 3e-28 Identities = 64/112 (57%), Positives = 75/112 (66%) Frame = -3 Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438 P F +A GIHE DIRKDLY+N VLS +++ LA + Sbjct: 38 PAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANA 97 Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282 +MK+K+IAPPERKYSVWIGGSILASLSTFQQMWI+K+EY E GP IVHRKCF Sbjct: 98 SMKVKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149 Score = 53.6 bits (123), Expect = 1e-07 Identities = 29/59 (49%), Positives = 37/59 (62%) Frame = -2 Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKI 457 +A +P+F GME+ A N IMKCDV L + GG+TM+PGIADRMQK+I Sbjct: 33 EAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEI 91 >SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) Length = 543 Score = 49.2 bits (112), Expect = 3e-06 Identities = 23/60 (38%), Positives = 36/60 (60%) Frame = -3 Query: 449 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THR 270 + P ++ ++I+ ++Y+VW GGS+LAS F + +K +YDE GPSI F HR Sbjct: 285 IKPKPIETQVISHHMQRYAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF-LHR 343 >SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 411 Score = 41.5 bits (93), Expect = 6e-04 Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%) Frame = -3 Query: 431 KIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 309 KI+I PP RK+ V++GG++LA + W++++EY+E G Sbjct: 358 KIRIEDPPRRKHMVFMGGAVLADIMKDKDSFWMTRKEYEEKG 399 Score = 31.5 bits (68), Expect = 0.61 Identities = 16/61 (26%), Positives = 30/61 (49%) Frame = -2 Query: 639 AQKASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKK 460 A +A +P +E + N+I D+ + + GG+TMYPG+ R++++ Sbjct: 261 APEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERE 320 Query: 459 I 457 I Sbjct: 321 I 321 >SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) Length = 240 Score = 33.5 bits (73), Expect = 0.15 Identities = 16/38 (42%), Positives = 27/38 (71%), Gaps = 3/38 (7%) Frame = -3 Query: 464 RKSQALAPSTMKIKIIA---PPERKYSVWIGGSILASL 360 R+ + P +M++K+I+ E++++ WIGGSILASL Sbjct: 193 RELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILASL 230 >SB_47955| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 181 Score = 31.9 bits (69), Expect = 0.46 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +1 Query: 346 CWKVEREARIDPPIHTEYFLSGGAMILIFIVDGARACDFLLHT-VGDSRVHGGTTDNTV 519 C+K+ E + P H Y+ + L ++ A CDF+LH+ VGD + D V Sbjct: 87 CFKISDEKLVLRPTHAHYY----QVQLQLLITNANYCDFVLHSGVGDPHIERIRKDERV 141 >SB_59400| Best HMM Match : UPF0160 (HMM E-Value=8.1) Length = 337 Score = 31.1 bits (67), Expect = 0.80 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +1 Query: 346 CWKVEREARIDPPIHTEYFLSGGAMILIFIVDGARACDFLLHT-VGDSRVHGGTTDNTV 519 C+K+ E + P H Y+ + L ++ A CDF+LH+ VGD + D V Sbjct: 281 CFKISDEKLVLRPTHAHYY----QVQLQLLITNANYCDFVLHSGVGDPHMERIRKDERV 335 >SB_51456| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 198 Score = 31.1 bits (67), Expect = 0.80 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +1 Query: 346 CWKVEREARIDPPIHTEYFLSGGAMILIFIVDGARACDFLLHT-VGDSRVHGGTTDNTV 519 C+K+ E + P H Y+ + L ++ A CDF+LH+ VGD + D V Sbjct: 108 CFKISDEKLVLRPTHAHYY----QVQLQLLITNANYCDFVLHSGVGDPHMERIRKDERV 162 >SB_41816| Best HMM Match : Peptidase_M10 (HMM E-Value=0) Length = 556 Score = 31.1 bits (67), Expect = 0.80 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 2/88 (2%) Frame = +3 Query: 330 FRDPHLLEGREGGEDRSTDPYGVLPLWRS--NDLNLHCRWGESL*FSFAYGRRFQGTWWY 503 F+D ++ + RE G P + LW + L+ WGE + F F G+ + W Y Sbjct: 313 FKDAYVWKLRETGFAPGY-PQLISKLWPGLPDSLDAAVGWGEDITFFFK-GKLY---WKY 367 Query: 504 HRQYGVGVQVLTDVPRRTS*WSLCGLVD 587 G +V D P+R S W L G VD Sbjct: 368 Q-----GFKVYPDYPKRISNWGLPGKVD 390 >SB_22893| Best HMM Match : SWIM (HMM E-Value=0.99) Length = 461 Score = 31.1 bits (67), Expect = 0.80 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +1 Query: 346 CWKVEREARIDPPIHTEYFLSGGAMILIFIVDGARACDFLLHT-VGDSRVHGGTTDNTV 519 C+K+ E + P H Y+ + L ++ A CDF+LH+ VGD + D V Sbjct: 371 CFKISDEKLVLRPTHAHYY----QVQLQLLITNANYCDFVLHSGVGDPHMERIRKDERV 425 >SB_41148| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 583 Score = 29.1 bits (62), Expect = 3.2 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = -1 Query: 328 RSTTSLAPPLYTGSASKRTARRCLHSPRPAAQFRL 224 ++T P++T S K+T R C+ P P + R+ Sbjct: 18 KNTLRFIMPVFTRSGRKKTNRTCIEDPTPQTERRV 52 >SB_1159| Best HMM Match : 7tm_3 (HMM E-Value=1.4e-28) Length = 562 Score = 29.1 bits (62), Expect = 3.2 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +3 Query: 405 LWRSNDLNLHCR-WGESL*FSFAYGRRFQGTWWYH 506 L R +D+ R W SL FS AYG F TW H Sbjct: 149 LTRGHDIACASRTWMLSLGFSLAYGSMFSKTWRVH 183 >SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) Length = 1066 Score = 28.3 bits (60), Expect = 5.7 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = -1 Query: 355 PSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLHSPRPAAQ 233 P N+ G++ R +L P++TGS + R P P+A+ Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSAR 919 >SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1338 Score = 28.3 bits (60), Expect = 5.7 Identities = 15/51 (29%), Positives = 23/51 (45%) Frame = -1 Query: 385 SVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLHSPRPAAQ 233 S D+ P +PS R S+ +APP S +K+ ++ S P Q Sbjct: 445 SKDKKGPSKVPSKDTRRRPTSSGKIAPPPRQTSPTKQATKKTTPSRPPPTQ 495 >SB_8479| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 548 Score = 28.3 bits (60), Expect = 5.7 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Frame = -1 Query: 388 GSVDRSSPPSLPSNRCGSRNRS----TTSLAPPLYTGSASKRTARRC 260 GS+ SP S P +R GSR R+ T+S A + +T ++C Sbjct: 338 GSIAPPSPTSTPRSRTGSRTRTPPTPTSSRASSRGSARGGAKTTKKC 384 >SB_51621| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 510 Score = 27.9 bits (59), Expect = 7.5 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = -2 Query: 501 TTMYPG-IADRMQKKITGSRPIDNED*DHCSSREEVLRMDRWIDPRLPLYLPTDVDLETG 325 + +Y G +AD +Q+K+ S + + C R+E R ++P+L + D+++ Sbjct: 428 SALYVGRLADSLQQKLRLSEKLLSSAQTMCEKRKEAAEQQRELEPKLDVIRQKTKDMQSQ 487 Query: 324 V 322 + Sbjct: 488 I 488 >SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 318 Score = 27.9 bits (59), Expect = 7.5 Identities = 11/37 (29%), Positives = 15/37 (40%) Frame = -1 Query: 358 LPSNRCGSRNRSTTSLAPPLYTGSASKRTARRCLHSP 248 L C SR + P Y G RT ++C + P Sbjct: 118 LVKRTCNSRKKKKPEKRPSSYNGDTDYRTRKQCRYEP 154 >SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 583 Score = 27.5 bits (58), Expect = 9.9 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = -1 Query: 400 STPYGSVDRSSPPSLPSNRCGSRNRSTTSLAPPLYTGSAS 281 STP +V PP PSN + ++ S +P T S S Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,643,782 Number of Sequences: 59808 Number of extensions: 488372 Number of successful extensions: 1393 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 1302 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1383 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1633044375 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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