Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0067
(646 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 152 8e-39
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 152 8e-39
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 152 8e-39
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 132 7e-33
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 28 0.22
AF395079-1|AAK97461.1| 371|Anopheles gambiae basic helix-loop-h... 26 1.2
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 25 2.0
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 23 8.3
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 152 bits (369), Expect = 8e-39
Identities = 79/112 (70%), Positives = 83/112 (74%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F +ACGIHE T DIRKDLYANTVLS +++ ALAPS
Sbjct: 265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 63.3 bits (147), Expect = 6e-12
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
+A +PSF GME+ NSIMKCDV L + GGTTMYPGIADRMQK+IT
Sbjct: 260 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 319
Query: 453 GSRP 442
P
Sbjct: 320 ALAP 323
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 152 bits (369), Expect = 8e-39
Identities = 79/112 (70%), Positives = 83/112 (74%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F +ACGIHE T DIRKDLYANTVLS +++ ALAPS
Sbjct: 265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 63.3 bits (147), Expect = 6e-12
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
+A +PSF GME+ NSIMKCDV L + GGTTMYPGIADRMQK+IT
Sbjct: 260 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 319
Query: 453 GSRP 442
P
Sbjct: 320 ALAP 323
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 152 bits (369), Expect = 8e-39
Identities = 79/112 (70%), Positives = 83/112 (74%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F +ACGIHE T DIRKDLYANTVLS +++ ALAPS
Sbjct: 265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 63.3 bits (147), Expect = 6e-12
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
+A +PSF GME+ NSIMKCDV L + GGTTMYPGIADRMQK+IT
Sbjct: 260 EALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 319
Query: 453 GSRP 442
P
Sbjct: 320 ALAP 323
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 132 bits (320), Expect = 7e-33
Identities = 69/112 (61%), Positives = 77/112 (68%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F ++ GIHE DIRKDLYAN+VLS +++ +LAPS
Sbjct: 265 PSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITSLAPS 324
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
T+KIKIIAPPERKYSVWIGGSILASLSTFQ MWISK EYDE GP IVHRKCF
Sbjct: 325 TIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHEYDEGGPGIVHRKCF 376
Score = 64.5 bits (150), Expect = 3e-12
Identities = 35/66 (53%), Positives = 40/66 (60%)
Frame = -2
Query: 639 AQKASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKK 460
A +A +PSF GMES NSIM+CDV L + GGTTMYPGIADRMQK+
Sbjct: 258 APEALFQPSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGGTTMYPGIADRMQKE 317
Query: 459 ITGSRP 442
IT P
Sbjct: 318 ITSLAP 323
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 28.3 bits (60), Expect = 0.22
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 586 STSPHKLHHEVRRGTSVRTCTPTPYCRWYHHVPWNRRPY 470
+T H L + +VR C PTP R ++ W RP+
Sbjct: 215 TTDMHVLSFSDHKALTVRLCLPTPPNRLTNNGYWQLRPH 253
>AF395079-1|AAK97461.1| 371|Anopheles gambiae basic
helix-loop-helix transcriptionfactor ASH protein.
Length = 371
Score = 25.8 bits (54), Expect = 1.2
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +1
Query: 436 VDGARACDFLLHTVGDSRVHGGTTDNT--VLAYKSLRMSHVALH 561
+ G + LHT G S V G TDN +LA + + H H
Sbjct: 273 IGGVTSSSVHLHTGGHSTVLGSATDNNNYILAQQQQQQHHHHQH 316
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 25.0 bits (52), Expect = 2.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 263 LPPQPAAGCSIQACN 219
LPP+ AGC+ Q C+
Sbjct: 167 LPPEDGAGCATQPCS 181
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 23.0 bits (47), Expect = 8.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 378 IDPRLPLYLPTDVDLETGVRRVW 310
+DP + LYL T+ L+ G + W
Sbjct: 1188 LDPDIRLYLKTNTYLQWGDKLFW 1210
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,171
Number of Sequences: 2352
Number of extensions: 16290
Number of successful extensions: 50
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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