Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0067
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 147 7e-36
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 146 2e-35
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 146 2e-35
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 146 2e-35
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 146 2e-35
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 146 2e-35
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 146 2e-35
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 146 2e-35
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 146 2e-35
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 146 2e-35
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 140 1e-33
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 85 5e-17
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 73 2e-13
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 51 6e-07
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 36 0.025
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 33 0.13
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 29 2.1
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 29 2.1
U37548-5|ABM01869.1| 224|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical p... 28 6.5
Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical pr... 28 6.5
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 147 bits (356), Expect = 7e-36
Identities = 78/116 (67%), Positives = 83/116 (71%)
Frame = -3
Query: 629 LLPNPRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQA 450
+L P F + GIHE T DIRKDLYANTVLS +++ Q
Sbjct: 260 VLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQH 319
Query: 449 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 320 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 146 bits (353), Expect = 2e-35
Identities = 76/112 (67%), Positives = 82/112 (73%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F ++ GIHE + DIRKDLYANTVLS +++ ALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 64.9 bits (151), Expect = 5e-11
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
+A +PSF GMES NSIMKCD+ L + GGTTMYPGIADRMQK+IT
Sbjct: 260 EAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 319
Query: 453 GSRP 442
P
Sbjct: 320 ALAP 323
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 146 bits (353), Expect = 2e-35
Identities = 76/112 (67%), Positives = 82/112 (73%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F ++ GIHE + DIRKDLYANTVLS +++ ALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
+A +PSF GMES NSIMKCD+ L + GGTTMYPGIADRMQK+IT
Sbjct: 260 EALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 319
Query: 453 GSRP 442
P
Sbjct: 320 ALAP 323
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 146 bits (353), Expect = 2e-35
Identities = 76/112 (67%), Positives = 82/112 (73%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F ++ GIHE + DIRKDLYANTVLS +++ ALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 64.9 bits (151), Expect = 5e-11
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
+A +PSF GMES NSIMKCD+ L + GGTTMYPGIADRMQK+IT
Sbjct: 260 EAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 319
Query: 453 GSRP 442
P
Sbjct: 320 ALAP 323
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 146 bits (353), Expect = 2e-35
Identities = 76/112 (67%), Positives = 82/112 (73%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F ++ GIHE + DIRKDLYANTVLS +++ ALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
+A +PSF GMES NSIMKCD+ L + GGTTMYPGIADRMQK+IT
Sbjct: 260 EALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 319
Query: 453 GSRP 442
P
Sbjct: 320 ALAP 323
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 146 bits (353), Expect = 2e-35
Identities = 76/112 (67%), Positives = 82/112 (73%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F ++ GIHE + DIRKDLYANTVLS +++ ALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
+A +PSF GMES NSIMKCD+ L + GGTTMYPGIADRMQK+IT
Sbjct: 260 EALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 319
Query: 453 GSRP 442
P
Sbjct: 320 ALAP 323
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 146 bits (353), Expect = 2e-35
Identities = 76/112 (67%), Positives = 82/112 (73%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F ++ GIHE + DIRKDLYANTVLS +++ ALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 64.9 bits (151), Expect = 5e-11
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
+A +PSF GMES NSIMKCD+ L + GGTTMYPGIADRMQK+IT
Sbjct: 260 EAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 319
Query: 453 GSRP 442
P
Sbjct: 320 ALAP 323
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 146 bits (353), Expect = 2e-35
Identities = 76/112 (67%), Positives = 82/112 (73%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F ++ GIHE + DIRKDLYANTVLS +++ ALAPS
Sbjct: 221 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 280
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 281 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
+A +PSF GMES NSIMKCD+ L + GGTTMYPGIADRMQK+IT
Sbjct: 216 EALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 275
Query: 453 GSRP 442
P
Sbjct: 276 ALAP 279
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 146 bits (353), Expect = 2e-35
Identities = 76/112 (67%), Positives = 82/112 (73%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F ++ GIHE + DIRKDLYANTVLS +++ ALAPS
Sbjct: 251 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 310
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 311 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
+A +PSF GMES NSIMKCD+ L + GGTTMYPGIADRMQK+IT
Sbjct: 246 EALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 305
Query: 453 GSRP 442
P
Sbjct: 306 ALAP 309
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 146 bits (353), Expect = 2e-35
Identities = 76/112 (67%), Positives = 82/112 (73%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F ++ GIHE + DIRKDLYANTVLS +++ ALAPS
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
Score = 64.5 bits (150), Expect = 6e-11
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
+A +PSF GMES NSIMKCD+ L + GGTTMYPGIADRMQK+IT
Sbjct: 260 EALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 319
Query: 453 GSRP 442
P
Sbjct: 320 ALAP 323
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 140 bits (338), Expect = 1e-33
Identities = 75/112 (66%), Positives = 81/112 (72%)
Frame = -3
Query: 617 PRFGVWKACGIHEPT*TPS*SATWDIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPS 438
P F ++ GIHE + DIRKDLYANTVLS +++ ALAP
Sbjct: 265 PSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP- 323
Query: 437 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 324 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
Score = 64.9 bits (151), Expect = 5e-11
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = -2
Query: 633 KASSKPSFWGMESLRHPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
+A +PSF GMES NSIMKCD+ L + GGTTMYPGIADRMQK+IT
Sbjct: 260 EAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEIT 319
Query: 453 GSRP 442
P
Sbjct: 320 ALAP 323
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 84.6 bits (200), Expect = 5e-17
Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Frame = -3
Query: 545 DIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPSTMKIKIIAPP---ERKYSVWIGGS 375
DIR L++N ++ L P T+K+++ A P ERKY WIGGS
Sbjct: 346 DIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGS 405
Query: 374 ILASLSTFQQMWISKQEYDESGPSIVHRKC 285
IL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 406 ILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 72.5 bits (170), Expect = 2e-13
Identities = 36/88 (40%), Positives = 54/88 (61%)
Frame = -3
Query: 545 DIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPSTMKIKIIAPPERKYSVWIGGSILA 366
D+R+ LY+N VLS + + +AP+ KI+I A ER WIGGSI+A
Sbjct: 287 DLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVA 346
Query: 365 SLSTFQQMWISKQEYDESGPSIVHRKCF 282
SL TF++MW+ K+EY++ G S +H++ F
Sbjct: 347 SLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -3
Query: 449 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 300
L P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 365 LKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = -3
Query: 431 KIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 309
KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 341 KIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = -2
Query: 507 GGTTMYPGIADRMQKKI 457
GGTTMYPG+ R++K++
Sbjct: 305 GGTTMYPGLPSRLEKEL 321
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 35.9 bits (79), Expect = 0.025
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = -2
Query: 621 KPSFWGMESLR-HPRAHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKIT 454
KP WG+++ H H +I++C + L R + GG ++ PGIA++++++++
Sbjct: 441 KPKKWGLDTKGLHQLIH-EAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELS 496
Score = 34.3 bits (75), Expect = 0.075
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = -3
Query: 545 DIRKDLYANTVLSVVPPCTLESPTVCKRKSQALAPSTMKIKIIAPPERKYSVWIGGSILA 366
D R+ LY N L+ +++ + P+T+ ++ P R + ++G I+A
Sbjct: 466 DSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVA 525
Query: 365 SLSTFQQMWISKQE 324
S STF+ IS Q+
Sbjct: 526 SASTFEDSCISLQQ 539
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = -1
Query: 400 STPYGSVDRSSPPSLPSNRCG-SRNRSTTSLAPPLY-TGSASKRTARRCLHSPRPAAQFR 227
S+ Y + +RSSPP ++ C S + +T PL+ + S SK +A + SP P++ F
Sbjct: 1128 SSVYSADERSSPPLAGNSTCSVSTSSDSTPDECPLHGSRSFSKISALKIQSSPSPSSSFS 1187
Query: 226 LVISVNLIVRKILL 185
+S+ + LL
Sbjct: 1188 RFLSLRRTAKPSLL 1201
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = -2
Query: 579 AHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKITGSRPID 436
A I SI +C L ++GG++ +PG +R+++++ P +
Sbjct: 292 AVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAE 339
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = -2
Query: 579 AHINSIMKCDVGHP*GLVRQHRIVGGTTMYPGIADRMQKKITGSRPID 436
A I SI +C L ++GG++ +PG +R+++++ P +
Sbjct: 292 AVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAE 339
>U37548-5|ABM01869.1| 224|Caenorhabditis elegans Hypothetical
protein C54D2.6 protein.
Length = 224
Score = 28.3 bits (60), Expect = 4.9
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +2
Query: 488 GYMVVPPTIRCWRTSPYGCPTSH 556
G ++PP ++C + S +GC +H
Sbjct: 113 GRTIIPPDLKCVKKSLFGCDVAH 135
>Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 349 WKVEREARIDPPIHTEYFLSGGAMILIFIVDGARACDFLLHTVGDSRVHGG 501
W R + PP+H + L + ++ +VD + D++ H + SR+ GG
Sbjct: 68 WWNSRGRKSSPPMHCGFLLMLASNLVYLLVDSVPS-DWVAHVMMVSRLLGG 117
>Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 349 WKVEREARIDPPIHTEYFLSGGAMILIFIVDGARACDFLLHTVGDSRVHGG 501
W R + PP+H + L + ++ +VD + D++ H + SR+ GG
Sbjct: 68 WWNSRGRKSSPPMHCGFLLMLASNLVYLLVDSVPS-DWVAHVMMVSRLLGG 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,651,006
Number of Sequences: 27780
Number of extensions: 343519
Number of successful extensions: 977
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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