Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0065
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   4.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   4.3  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              21   10.0 
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   10.0 
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   10.0 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   10.0 

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 347 KFVFYTNLKYNENYLAPRE 403
           K+V Y N+K   ++  PRE
Sbjct: 34  KWVVYNNIKRKRSWSRPRE 52


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 347 KFVFYTNLKYNENYLAPRE 403
           K+V Y N+K   ++  PRE
Sbjct: 155 KWVVYNNIKRKRSWSRPRE 173


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 30 VSGYSLRTLKIQVRDVR 80
          V+  ++  LKIQ+RDV+
Sbjct: 14 VNAMTIEELKIQLRDVQ 30


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +1

Query: 268 FKYKYIHYNQLIY 306
           +KY Y +YN+ +Y
Sbjct: 329 YKYNYNNYNKKLY 341


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 326 NNLIYFHKFVFYTNLKYNENY 388
           NN  Y +    Y N  YN NY
Sbjct: 327 NNYKYNYNNNNYNNNNYNNNY 347


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 347 KFVFYTNLKYNENY 388
           KF+F     YN+NY
Sbjct: 129 KFIFPQENNYNDNY 142


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,423
Number of Sequences: 438
Number of extensions: 2975
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)