Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0062
(511 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 186 8e-48
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 186 8e-48
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 186 8e-48
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 186 8e-48
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 186 8e-48
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 186 8e-48
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 186 8e-48
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 186 8e-48
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 186 8e-48
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 186 8e-48
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 184 3e-47
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 114 3e-26
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 108 3e-24
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 108 3e-24
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 107 6e-24
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 107 6e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 91 6e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 88 3e-18
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 68 3e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 40 8e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 40 8e-04
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.5
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 27 6.0
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 27 6.0
Z99281-19|CAD56260.1| 317|Caenorhabditis elegans Hypothetical p... 27 7.9
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 7.9
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 186 bits (453), Expect = 8e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 108 bits (259), Expect = 3e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 186 bits (453), Expect = 8e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 107 bits (256), Expect = 6e-24
Identities = 46/51 (90%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 186 bits (453), Expect = 8e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 108 bits (259), Expect = 3e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (453), Expect = 8e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 108 bits (259), Expect = 3e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 186 bits (453), Expect = 8e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 108 bits (259), Expect = 3e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (453), Expect = 8e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 105 bits (252), Expect = 2e-23
Identities = 44/51 (86%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+++AAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (453), Expect = 8e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 108 bits (259), Expect = 3e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 186 bits (453), Expect = 8e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFNTPAM
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAM 89
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 186 bits (453), Expect = 8e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFNTPAM
Sbjct: 95 APLNPKANREKMTQIMFETFNTPAM 119
Score = 70.1 bits (164), Expect = 9e-13
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +1
Query: 163 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 37
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 186 bits (453), Expect = 8e-48
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFNTPAM
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAM 133
Score = 108 bits (259), Expect = 3e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 184 bits (449), Expect = 3e-47
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPK+NREKMTQIMFETFNTPAM
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPAM 132
Score = 102 bits (245), Expect = 1e-22
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +1
Query: 115 DEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 50
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 114 bits (275), Expect = 3e-26
Identities = 47/83 (56%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAS 437
D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+A
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 438 LNPKANREKMTQIMFETFNTPAM 506
LNP NRE+ +I FETFN PA+
Sbjct: 114 LNPLKNRERSAEIFFETFNVPAL 136
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 249
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 108 bits (259), Expect = 3e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 108 bits (259), Expect = 3e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 107 bits (256), Expect = 6e-24
Identities = 46/51 (90%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 107 bits (256), Expect = 6e-24
Identities = 46/51 (90%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 80.2 bits (189), Expect = 8e-16
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 356
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 90.6 bits (215), Expect = 6e-19
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +3
Query: 237 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 413
R G KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 414 PVLLTEASLNPKANREKMTQIMFETF 491
+LLTE LNP +NREKM Q+MFE +
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQY 131
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 225
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 88.2 bits (209), Expect = 3e-18
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAS 437
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPP 123
Query: 438 LNPKANREKMTQIMFETFNTPAM 506
LN NRE +IMFE+FN P +
Sbjct: 124 LNTPENREYTAEIMFESFNVPGL 146
Score = 37.1 bits (82), Expect = 0.007
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 109 MCDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 216
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 68.1 bits (159), Expect = 3e-12
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +3
Query: 321 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTQIMFETFNTP 500
++ G++ +W+ EKI H++ N L P EHPVL +E+S N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 501 A 503
A
Sbjct: 154 A 154
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 216
+E++ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 40.3 bits (90), Expect = 8e-04
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 225 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 398
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 399 APEEHPVLLTEASLNPKANREKMTQIMFETF 491
+ LT+ + A + ++I+F+ F
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 40.3 bits (90), Expect = 8e-04
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +3
Query: 225 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 398
P S ++ +K +V E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 399 APEEHPVLLTEASLNPKANREKMTQIMFETF 491
+ LT+ + A + ++I+F+ F
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 163 KAGFAGDDAPRAVFPSIVGRPRHQG 237
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 294 FCSVPHLLHKSPSAHTDHHALMAGPSHDRGEHGARSIISCE 172
F SV + ++PS +D L+ G H + +GA S C+
Sbjct: 5 FNSVSKIQWRNPSPVSDTSCLVCGDPHGKRHYGAMSCNGCK 45
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 294 FCSVPHLLHKSPSAHTDHHALMAGPSHDRGEHGARSIISCE 172
F SV + ++PS +D L+ G H + +GA S C+
Sbjct: 5 FNSVSKIQWRNPSPVSDTSCLVCGDPHGKRHYGAMSCNGCK 45
>Z99281-19|CAD56260.1| 317|Caenorhabditis elegans Hypothetical
protein Y57G11C.38 protein.
Length = 317
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = -3
Query: 308 GQDTSFALCLISYIRVLL-PIPTITP*WRGLPTIE--GNTARGASSPAKPALHIPEPLST 138
G + C ++ VLL P P +T PT+ A G + PA+ IPEP T
Sbjct: 191 GLEPEVCTCSMNMCNVLLDPAPLMTTPVMNDPTLLTLATIALGDETAVTPAIIIPEPQPT 250
Query: 137 TNAAISS 117
+++
Sbjct: 251 VGTPVTT 257
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 315 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 416
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 315 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 416
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,299,073
Number of Sequences: 27780
Number of extensions: 306954
Number of successful extensions: 972
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -