Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0062
(511 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 183 5e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 183 7e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 183 7e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 181 2e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 180 4e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 180 4e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 178 2e-45
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 178 2e-45
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 178 2e-45
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 159 8e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 151 4e-37
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 149 1e-36
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 97 8e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 87 5e-18
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 78 3e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 66 2e-11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 52 2e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 46 1e-05
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 46 1e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.048
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 28 3.2
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 3.2
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 3.2
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 4.2
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 28 4.2
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 7.3
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 7.3
At4g10350.1 68417.m01700 no apical meristem (NAM) family protein... 27 7.3
At3g58650.1 68416.m06537 expressed protein 27 7.3
At3g45240.1 68416.m04882 protein kinase family protein contains ... 27 7.3
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 27 9.7
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (446), Expect = 5e-47
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFNTPAM
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAM 134
Score = 87.0 bits (206), Expect = 6e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E+I LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 7e-47
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFNTPAM
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAM 134
Score = 87.0 bits (206), Expect = 6e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E+I LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 7e-47
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFNTPAM
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAM 134
Score = 87.0 bits (206), Expect = 6e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E+I LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 181 bits (441), Expect = 2e-46
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFN PAM
Sbjct: 110 APLNPKANREKMTQIMFETFNVPAM 134
Score = 87.0 bits (206), Expect = 6e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E+I LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 180 bits (439), Expect = 4e-46
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFN PAM
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAM 134
Score = 87.0 bits (206), Expect = 6e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E+I LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (439), Expect = 4e-46
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
GQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
A LNPKANREKMTQIMFETFN PAM
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAM 134
Score = 87.0 bits (206), Expect = 6e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
E+I LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMG++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 178 bits (434), Expect = 2e-45
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 435 SLNPKANREKMTQIMFETFNTPAM 506
LNPKANREKMTQIMFETFN+PAM
Sbjct: 111 PLNPKANREKMTQIMFETFNSPAM 134
Score = 82.6 bits (195), Expect = 1e-16
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
++I +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM ++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 178 bits (434), Expect = 2e-45
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 435 SLNPKANREKMTQIMFETFNTPAM 506
LNPKANREKMTQIMFETFN+PAM
Sbjct: 111 PLNPKANREKMTQIMFETFNSPAM 134
Score = 82.6 bits (195), Expect = 1e-16
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
++I +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM ++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 178 bits (434), Expect = 2e-45
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEA
Sbjct: 51 QKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEA 110
Query: 435 SLNPKANREKMTQIMFETFNTPAM 506
LNPKANREKMTQIMFETFN+PAM
Sbjct: 111 PLNPKANREKMTQIMFETFNSPAM 134
Score = 82.6 bits (195), Expect = 1e-16
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
++I +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM ++
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 159 bits (387), Expect = 8e-40
Identities = 67/84 (79%), Positives = 79/84 (94%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
+KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEA
Sbjct: 52 EKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEA 111
Query: 435 SLNPKANREKMTQIMFETFNTPAM 506
LNPK NREKMTQIMFE+F P+M
Sbjct: 112 PLNPKVNREKMTQIMFESFAFPSM 135
Score = 83.4 bits (197), Expect = 8e-17
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEK 53
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 151 bits (365), Expect = 4e-37
Identities = 64/84 (76%), Positives = 77/84 (91%)
Frame = +3
Query: 255 QKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 434
+ D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEA
Sbjct: 6 ENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEA 65
Query: 435 SLNPKANREKMTQIMFETFNTPAM 506
LNPKA+REKMTQIMFETF P+M
Sbjct: 66 PLNPKADREKMTQIMFETFAVPSM 89
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 149 bits (360), Expect = 1e-36
Identities = 68/90 (75%), Positives = 75/90 (83%)
Frame = +3
Query: 237 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 416
RDG +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDG-LNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 417 VLLTEASLNPKANREKMTQIMFETFNTPAM 506
VLLTEA NPKANREKMTQIMFE+F+ PAM
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAM 123
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 228
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 96.7 bits (230), Expect = 8e-21
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = +3
Query: 258 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAS 437
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 438 LNPKANREKMTQIMFETFN 494
LNP NREKM + MFE +N
Sbjct: 111 LNPSKNREKMIETMFEKYN 129
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 225
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 87.4 bits (207), Expect = 5e-18
Identities = 43/85 (50%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +3
Query: 261 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 431
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 432 ASLNPKANREKMTQIMFETFNTPAM 506
+ L P +RE +I+FETFN P +
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGL 151
Score = 35.9 bits (79), Expect = 0.016
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 130 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 216
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 78.2 bits (184), Expect = 3e-15
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +3
Query: 267 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLN 443
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E LN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 444 PKANREKMTQIMFETFNTPAM 506
+ REK ++MFE + PA+
Sbjct: 136 TQQQREKAAELMFEKYKVPAL 156
Score = 56.4 bits (130), Expect = 1e-08
Identities = 22/34 (64%), Positives = 31/34 (91%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 219
+E++A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +3
Query: 240 DGRYGQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 416
D G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 417 VLLTEASLNPKANREK 464
+LL E LN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 56.8 bits (131), Expect = 8e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 219
+E++A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 318 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEASLNPKANREKMTQIMFETFN 494
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 222
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 318 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEASLNPKANREKMTQIMFETFN 494
P + +V ++ ME I + F + +HP+L+TE + NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 495 TPAM 506
PA+
Sbjct: 145 VPAV 148
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 234
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 46.0 bits (104), Expect = 1e-05
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +3
Query: 309 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTQIMFET 488
++ PI+ G + N D +IW H F + L +AP +LLTEA L+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 489 F 491
F
Sbjct: 121 F 121
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 225
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 34.3 bits (75), Expect = 0.048
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -3
Query: 368 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVL-LPIPTITP*WRGLPTIEGNT 198
P L V+ ++ D + + + + YI + +P P I P RGL +G T
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKP-TRGLIVYQGAT 307
Query: 197 ARGASSPAKPALHIPEPLSTTNAAISS 117
+ +SSPA+P + +P +ST + S+
Sbjct: 308 S--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 207 LDRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLK 314
L+RG+ S R GR +S D+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSGSRDKAQSRRSKISLK 461
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 276 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 404
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 276 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 404
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 4.2
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 364 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 275
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 342 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTQIMFETF 491
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 342 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTQIMFETF 491
NW +E + + + P LL EA + PK+ E Q +++TF
Sbjct: 494 NWSYIEFVDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTF 543
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 415 GCSSGATRSSL*-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 257
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At4g10350.1 68417.m01700 no apical meristem (NAM) family protein
contains Pfam PF02365: No apical meristem (NAM) domain;
nap gene, Arabidopsis thaliana, gb:AJ222713
Length = 341
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 282 PHLLHKSPSAHTDHHALMAGPSHDRGEHGARSIISCETGL 163
P + HK PS D+ + +A S G + +CE GL
Sbjct: 227 PPIFHKPPSLGFDYSSGLARDSESAASEGLQYQQACEPGL 266
>At3g58650.1 68416.m06537 expressed protein
Length = 723
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 201 VPLDRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLK--YPIEHGIVTNWDDMEK 362
+PL R K+ P + R G ++S + ++ + KRG ++K I+ T+ DD ++
Sbjct: 308 LPLSRKKSLPRSKKPRNGVQESGIYEDKRIKRGEKSIKCNISIDGDSSTSKDDQKR 363
>At3g45240.1 68416.m04882 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 396
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 210 DRGKAPPSGRDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIV 338
D G+ G D G+++ V + ++SKR LK +++G+V
Sbjct: 39 DSGETSNPGGDDEEGEEEEEVEELSRSKRSEEILKCKLQNGLV 81
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 118 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 243
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,722,040
Number of Sequences: 28952
Number of extensions: 291944
Number of successful extensions: 781
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 917929344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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