Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0061
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53271| Best HMM Match : No HMM Matches (HMM E-Value=.) 179 1e-45
SB_28534| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_20540| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-11) 33 0.11
SB_3017| Best HMM Match : RVT_1 (HMM E-Value=1.1e-19) 33 0.11
SB_18998| Best HMM Match : Exo_endo_phos (HMM E-Value=1.1e-10) 33 0.18
SB_57657| Best HMM Match : PHD (HMM E-Value=0.0012) 32 0.24
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 32 0.32
SB_51334| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_48685| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_24186| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_29292| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_29163| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_49455| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_35016| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8) 29 2.3
SB_11242| Best HMM Match : MAM (HMM E-Value=0) 29 3.0
SB_54640| Best HMM Match : TolA (HMM E-Value=1.7) 28 4.0
SB_5694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_41068| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9) 28 5.3
SB_17121| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_5796| Best HMM Match : RIO1 (HMM E-Value=0) 27 6.9
SB_48928| Best HMM Match : Glyco_hydro_19 (HMM E-Value=8.5) 27 9.2
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 9.2
>SB_53271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 687
Score = 179 bits (436), Expect = 1e-45
Identities = 91/144 (63%), Positives = 103/144 (71%), Gaps = 2/144 (1%)
Frame = +2
Query: 2 RLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLI 181
RLNAPK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL G EV KIVKQRLI
Sbjct: 435 RLNAPKHWMLDKLSGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALNGEEVKKIVKQRLI 494
Query: 182 KVDGKVRTDPTYPAGFMDVVSIEKIMNCFV*SMMLRADSQSTVSPL--RRLSTKLCKVKR 355
K+DGKVRTD TYPAGFMDVV+I+K F ++ + V + KL +V+R
Sbjct: 495 KIDGKVRTDTTYPAGFMDVVTIDKTGENF--RLLYDVKGRFAVHRITAEEAKYKLGRVRR 552
Query: 356 VATGPKNVPYLVTHDGPYHPLPRP 427
V G K VPY+VTHD P P
Sbjct: 553 VDVGAKGVPYIVTHDARTIRYPDP 576
Score = 47.6 bits (108), Expect = 6e-06
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +3
Query: 402 ARTIRYPDPLIKSQRFHPVDIATTKIMDFIKFESGN 509
ARTIRYPDP IK +DI T K++D+IKF++GN
Sbjct: 568 ARTIRYPDPNIKVNDTVVIDIKTGKVIDYIKFDTGN 603
>SB_28534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 33.5 bits (73), Expect = 0.11
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +2
Query: 107 IFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKIMNCFV*SMML 286
IF ++R ++ G VL L+ V + + D Y G ++I + FV S+
Sbjct: 254 IFRKDRNEF---GGGVLSAFSNHLV-VTHEEQMDGNYE-GIWSKINIAGSKSLFVGSVYR 308
Query: 287 RADSQSTVSPLRRLSTKLCKVKR------VATGPKNVPYLVTHDGPYHPLPRPTY 433
DS V PL L LCK+ + + TG N+P + D Y P PTY
Sbjct: 309 TPDSN--VDPLVALDGALCKLVKNPIPNILITGDLNLPSISWEDDNYAVRPNPTY 361
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 33.5 bits (73), Expect = 0.11
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +2
Query: 107 IFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKIMNCFV*SMML 286
IF ++R ++ G VL L+ V + + D Y G ++I + FV S+
Sbjct: 372 IFRKDRNEF---GGGVLSAFSNHLV-VTHEEQMDGNYE-GIWSKINIAGSKSLFVGSVYR 426
Query: 287 RADSQSTVSPLRRLSTKLCKVKR------VATGPKNVPYLVTHDGPYHPLPRPTY 433
DS V PL L LCK+ + + TG N+P + D Y P PTY
Sbjct: 427 TPDSN--VDPLVALDGALCKLVKNPIPNMLITGDLNLPSISWEDDNYAVRPNPTY 479
>SB_20540| Best HMM Match : Exo_endo_phos (HMM E-Value=3.3e-11)
Length = 301
Score = 33.5 bits (73), Expect = 0.11
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +2
Query: 107 IFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKIMNCFV*SMML 286
IF ++R ++ G VL L+ V + + D Y G ++I + FV S+
Sbjct: 61 IFRKDRNEF---GGGVLSAFSNHLV-VTHEEQMDGNYE-GIWSKINIAGSKSLFVGSVYR 115
Query: 287 RADSQSTVSPLRRLSTKLCKVKR------VATGPKNVPYLVTHDGPYHPLPRPTY 433
DS V PL L LCK+ + + TG N+P + D Y P PTY
Sbjct: 116 TPDSN--VDPLVALDGALCKLVKNPIPNILITGDLNLPSISWEDDNYAVRPNPTY 168
>SB_3017| Best HMM Match : RVT_1 (HMM E-Value=1.1e-19)
Length = 522
Score = 33.5 bits (73), Expect = 0.11
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +2
Query: 107 IFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKIMNCFV*SMML 286
IF ++R ++ G VL L+ V + + D Y G ++I + FV S+
Sbjct: 62 IFRKDRNEF---GGGVLSAFSNHLV-VTHEEQMDGNYE-GIWSKINIAGSKSLFVGSVYR 116
Query: 287 RADSQSTVSPLRRLSTKLCKVKR------VATGPKNVPYLVTHDGPYHPLPRPTY 433
DS V PL L LCK+ + + TG N+P + D Y P PTY
Sbjct: 117 TPDSN--VDPLVALDGALCKLLKNPIPNILITGDLNLPSISWEDDNYAVRPNPTY 169
>SB_18998| Best HMM Match : Exo_endo_phos (HMM E-Value=1.1e-10)
Length = 422
Score = 32.7 bits (71), Expect = 0.18
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +2
Query: 107 IFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKIMNCFV*SMML 286
IF ++R ++ G VL L+ V + + D Y G ++I + FV S+
Sbjct: 61 IFRKDRNEF---GGGVLSAFSNHLV-VTHEEQMDGNYE-GIWSKINIAGSKSLFVGSVYR 115
Query: 287 RADSQSTVSPLRRLSTKLCKVKR------VATGPKNVPYLVTHDGPYHPLPRPTY 433
DS V PL L LCK+ + + TG N+P + D Y P PTY
Sbjct: 116 IPDSN--VDPLVALDGALCKLVKNPIPNILITGDLNLPSISWEDDNYAVRPNPTY 168
>SB_57657| Best HMM Match : PHD (HMM E-Value=0.0012)
Length = 363
Score = 32.3 bits (70), Expect = 0.24
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +2
Query: 107 IFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKIMNCFV*SMML 286
IF ++R ++ G VL L+ V + + D Y G ++I + FV S+
Sbjct: 215 IFRKDRNEF---GGGVLSAFSNHLV-VTHEEQMDGNYE-GIWSKINIAGSKSLFVGSVYR 269
Query: 287 RADSQSTVSPLRRLSTKLCKVKR------VATGPKNVPYLVTHDGPYHPLPRPTY 433
DS V PL L LCK+ + + TG N+P + D Y P PTY
Sbjct: 270 IPDSN--VDPLVALDGALCKLVKNPIPNILITGDLNLPSISWEDYKYAVRPNPTY 322
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 31.9 bits (69), Expect = 0.32
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Frame = +2
Query: 215 YPAGFMDVVSIEKIMNCFV*SMMLRADSQSTVSPLRRLSTKLCKVKR------VATGPKN 376
Y G ++I + FV S+ DS V PL L LCK+ + + TG N
Sbjct: 47 YYEGIWSKINIAGSKSLFVGSVYRTPDSN--VDPLVALDGALCKLVKNPIPNILITGDLN 104
Query: 377 VPYLVTHDGPYHPLPRPTY 433
+P + D Y P PTY
Sbjct: 105 LPSISWEDDNYAVRPNPTY 123
>SB_51334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1402
Score = 31.5 bits (68), Expect = 0.43
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +2
Query: 107 IFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKIMNCFV*SMML 286
IF ++R ++ G VL L+ V + + D + G ++I + FV S+
Sbjct: 160 IFRKDRNEF---GGGVLSAFSNHLV-VTHEEQMDGNHE-GIWSKINIAGSKSLFVGSVYR 214
Query: 287 RADSQSTVSPLRRLSTKLCKVKR------VATGPKNVPYLVTHDGPYHPLPRPTY 433
DS V PL L LCK+ + + TG N+P + D Y P PTY
Sbjct: 215 TPDSN--VDPLVALDGALCKLVKNPIPNILITGDLNLPSISWEDDNYAVRPNPTY 267
>SB_48685| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 31.1 bits (67), Expect = 0.56
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +2
Query: 293 DSQSTVSPLRRLSTKLCKVKRVATGPKNVPYLVTHDGPYHPLPRPTYQKSTISSSRHC 466
+++ + L +L + K + ++P +V H P + LPR + ++SS HC
Sbjct: 188 ENRKELKRLEKLGKRTSFKKALVYTSPSLPQIVIHQQPANQLPRAGLRPLCVTSSNHC 245
>SB_24186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 31.1 bits (67), Expect = 0.56
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +2
Query: 293 DSQSTVSPLRRLSTKLCKVKRVATGPKNVPYLVTHDGPYHPLPRPTYQKSTISSSRHC 466
+++ + L +L + K + ++P +V H P + LPR + ++SS HC
Sbjct: 188 ENRKELKRLEKLGKRTSFKKALVYTSPSLPQIVIHQQPANQLPRAGLRPLCVTSSNHC 245
>SB_29292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 30.7 bits (66), Expect = 0.74
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
Frame = +2
Query: 107 IFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKIMNCFV*SMML 286
IF ++R ++ G VL L+ V + + D Y G ++I + FV S+
Sbjct: 327 IFRKDRNEF---GGGVLSAFSNHLV-VTHEEQMDGNYE-GIWSKINIAGSKSLFVGSVYR 381
Query: 287 RADSQSTVSPLRRLSTKLCKVKR------VATGPKNVPYLVTHDGPYHPLPRPTY 433
D V PL L LCK+ + + TG N+P + D Y P PTY
Sbjct: 382 TPDLN--VDPLVALDGALCKLVKNPIPNILITGDLNLPSISWEDDNYAVRPSPTY 434
>SB_29163| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 30.7 bits (66), Expect = 0.74
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Frame = +2
Query: 224 GFMDVVSIEKIMNCFV*SMMLRADSQSTVSPLRRLSTKLCKVKR------VATGPKNVPY 385
G ++I + FV S+ DS V PL L LCK+ + + TG N+P
Sbjct: 7 GIWSKINIAGSKSLFVGSVYRTPDSN--VDPLVALDGALCKLVKNPIPNILITGDLNLPS 64
Query: 386 LVTHDGPYHPLPRPTY 433
+ D Y P PTY
Sbjct: 65 ISWEDDNYAVRPNPTY 80
>SB_49455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Frame = +2
Query: 302 STVSPLRRLSTKLCKVKR------VATGPKNVPYLVTHDGPYHPLPRPTY 433
S V PL L LCK+ + + TG N+P + D Y P PTY
Sbjct: 550 SNVDPLVALDGALCKLVKNPIPNILITGDLNLPSISWEDDNYAVRPNPTY 599
>SB_35016| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8)
Length = 412
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Frame = +2
Query: 302 STVSPLRRLSTKLCKVKR------VATGPKNVPYLVTHDGPYHPLPRPTY 433
S V PL L LCK+ + + TG N+P + D Y P PTY
Sbjct: 123 SNVDPLVALDGALCKLVKNPIPNILITGDLNLPSISWEDDNYAVRPNPTY 172
>SB_11242| Best HMM Match : MAM (HMM E-Value=0)
Length = 348
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 2/20 (10%)
Frame = +1
Query: 115 EES--SEVCFDRKRSPENCE 168
EES +E+C DRKR P++CE
Sbjct: 76 EESRYNELCHDRKRGPDDCE 95
>SB_54640| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 589
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 324 LLRGDTVDCESALNIID*TKQFIIFSIETTSINPAG*VGSVLTFPS 187
L + + V C SA + ID + +++F ++ P V S+L FPS
Sbjct: 516 LAKVEEVVCPSAKSTID-VQNYVVFKQIPVNVQPKNGVKSMLAFPS 560
>SB_5694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1113
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 350 KRVATGPKNVPYLVTHDGPYHPLPRPTYQKSTISSSRHCNYEDYGLHQV*VWE 508
K+ A+GP + Y + D +HP P T S IS S N + + WE
Sbjct: 61 KQTASGPYQLLYWLWRDFSHHPAPVVTNVISVISGSDTINSSLEEVTNIKRWE 113
>SB_41068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = -1
Query: 192 PSTFMRRCFTIFRTSFPVKAYFRRFLRK------ITRGKHSRNLW 76
PS++ F +FRT FP + RF R+ IT ++LW
Sbjct: 84 PSSYNGHQFLVFRTDFPFSKHKNRFKRRTKYLYVITTSTKHQHLW 128
>SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9)
Length = 334
Score = 27.9 bits (59), Expect = 5.3
Identities = 25/84 (29%), Positives = 32/84 (38%), Gaps = 13/84 (15%)
Frame = +2
Query: 284 LRADSQSTVSPLRRLSTKLCKVK-------------RVATGPKNVPYLVTHDGPYHPLPR 424
L+A +PLRR+ST L V R+ T P V + PY PLPR
Sbjct: 109 LQASPLYPYNPLRRISTSLFLVSLQASRSYPYKNLARIPTSPSLVSLQASPSYPYKPLPR 168
Query: 425 PTYQKSTISSSRHCNYEDYGLHQV 496
S +S Y LH +
Sbjct: 169 IPTSLSLVSLQASFLYPCKPLHHI 192
>SB_17121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 410 HPLPRPTYQKSTISSSR 460
HP+P P YQ+S S+SR
Sbjct: 106 HPIPLPPYQRSLASTSR 122
>SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +2
Query: 365 GPKNVPYLVTHDGPYHP---LPRPTYQKSTISSSRHC 466
GPK+ P V DGP P +P + T ++SR C
Sbjct: 163 GPKSAPIFVFTDGPPPPPKVVPTDITETKTATTSRSC 199
>SB_5796| Best HMM Match : RIO1 (HMM E-Value=0)
Length = 1329
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 368 PKNVPYLVTHDGPYHPLPRPTYQKSTI 448
P+N PYL H +H LPR T + ++
Sbjct: 642 PQNEPYLSGHFPGHHSLPRMTQEVQSV 668
>SB_48928| Best HMM Match : Glyco_hydro_19 (HMM E-Value=8.5)
Length = 423
Score = 27.1 bits (57), Expect = 9.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 411 WYGPSCVTKYGTFLGPV 361
WY P + K+GT GP+
Sbjct: 191 WYSPDILHKFGTITGPI 207
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 368 PKNVPYLVTHDGPYHPLPRPTY 433
P N PY + + PY P P P Y
Sbjct: 135 PPNAPYPPSPNAPYPPPPNPPY 156
>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 379
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 296 SQSTVSPLRRLSTKLCKVKRVATGPKNVPYLVTHDGPYHPLPRPTYQKSTIS 451
S S VS L R S + R+ T P V + PY LPR + S +S
Sbjct: 306 SPSLVSLLARPSYLYKPLSRIPTSPSLVSLQASASYPYKTLPRISTSPSLVS 357
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,353,333
Number of Sequences: 59808
Number of extensions: 365134
Number of successful extensions: 979
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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