Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0059
(351 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 166 5e-42
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 165 9e-42
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 165 1e-41
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 164 2e-41
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 163 3e-41
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 8e-41
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 8e-41
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 1e-40
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 1e-40
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 5e-27
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 9e-18
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 4e-13
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 66 8e-12
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 65 2e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 2e-11
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 64 2e-11
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 63 7e-11
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 7e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 62 1e-10
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 5e-10
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 59 9e-10
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 34 0.037
SB_33002| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.26
SB_51769| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.80
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 29 0.80
SB_28844| Best HMM Match : SpoVT_AbrB (HMM E-Value=4.7) 29 0.80
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 29 1.4
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 29 1.4
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_37793| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_42833| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05) 27 5.7
SB_24478| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_50345| Best HMM Match : Cadherin (HMM E-Value=0) 26 7.5
SB_47057| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.94) 26 7.5
SB_4658| Best HMM Match : HTH_psq (HMM E-Value=0) 26 7.5
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 26 7.5
SB_5056| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.5
SB_53506| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.9
SB_38437| Best HMM Match : VWA (HMM E-Value=0) 26 9.9
SB_7097| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.9
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 166 bits (403), Expect = 5e-42
Identities = 72/75 (96%), Positives = 75/75 (100%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 215 HVPRAVFVDLEPTVL 259
HVPRAVFVDLEPTV+
Sbjct: 61 HVPRAVFVDLEPTVV 75
Score = 164 bits (398), Expect = 2e-41
Identities = 71/74 (95%), Positives = 74/74 (100%)
Frame = +2
Query: 38 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 217
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 218 VPRAVFVDLEPTVL 259
VPRAVFVDLEPTV+
Sbjct: 495 VPRAVFVDLEPTVV 508
Score = 68.9 bits (161), Expect = 1e-12
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDEVRTGTYRQLFH EQLITGKEDAANNYARG
Sbjct: 508 VDEVRTGTYRQLFHPEQLITGKEDAANNYARG 539
Score = 68.5 bits (160), Expect = 1e-12
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDEVRTGTYRQLFH EQL+TGKEDAANNYARG
Sbjct: 75 VDEVRTGTYRQLFHPEQLVTGKEDAANNYARG 106
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 165 bits (401), Expect = 9e-42
Identities = 73/77 (94%), Positives = 75/77 (97%)
Frame = +2
Query: 29 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 208
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 209 GKHVPRAVFVDLEPTVL 259
GKHVPRAVFVDLEPTV+
Sbjct: 123 GKHVPRAVFVDLEPTVV 139
Score = 164 bits (399), Expect = 2e-41
Identities = 71/75 (94%), Positives = 75/75 (100%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 215 HVPRAVFVDLEPTVL 259
HVPRAVFVDLEPTV+
Sbjct: 646 HVPRAVFVDLEPTVV 660
Score = 163 bits (397), Expect = 3e-41
Identities = 71/73 (97%), Positives = 73/73 (100%)
Frame = +2
Query: 38 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 217
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 218 VPRAVFVDLEPTV 256
VPRAVFVDLEPTV
Sbjct: 574 VPRAVFVDLEPTV 586
Score = 68.9 bits (161), Expect = 1e-12
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDEVRTGTYRQLFH EQLITGKEDAANNYARG
Sbjct: 139 VDEVRTGTYRQLFHPEQLITGKEDAANNYARG 170
Score = 68.9 bits (161), Expect = 1e-12
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDEVRTGTYRQLFH EQLITGKEDAANNYARG
Sbjct: 660 VDEVRTGTYRQLFHPEQLITGKEDAANNYARG 691
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 165 bits (400), Expect = 1e-41
Identities = 71/75 (94%), Positives = 75/75 (100%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 215 HVPRAVFVDLEPTVL 259
HVPRAVFVDLEPTV+
Sbjct: 61 HVPRAVFVDLEPTVV 75
Score = 68.9 bits (161), Expect = 1e-12
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDEVRTGTYRQLFH EQLITGKEDAANNYARG
Sbjct: 75 VDEVRTGTYRQLFHPEQLITGKEDAANNYARG 106
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 164 bits (398), Expect = 2e-41
Identities = 71/74 (95%), Positives = 74/74 (100%)
Frame = +2
Query: 38 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 217
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 218 VPRAVFVDLEPTVL 259
VPRAVFVDLEPTV+
Sbjct: 61 VPRAVFVDLEPTVV 74
Score = 68.9 bits (161), Expect = 1e-12
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDEVRTGTYRQLFH EQLITGKEDAANNYARG
Sbjct: 74 VDEVRTGTYRQLFHPEQLITGKEDAANNYARG 105
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 163 bits (397), Expect = 3e-41
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 215 HVPRAVFVDLEPTVLMRS 268
HVPRAVFVDLEPTV+ S
Sbjct: 61 HVPRAVFVDLEPTVVALS 78
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 301 EQLITGKEDAANNYARG 351
EQLITGKEDAANNYARG
Sbjct: 80 EQLITGKEDAANNYARG 96
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 162 bits (393), Expect = 8e-41
Identities = 69/74 (93%), Positives = 74/74 (100%)
Frame = +2
Query: 38 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 217
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 218 VPRAVFVDLEPTVL 259
VPRAVFVDLEPTV+
Sbjct: 433 VPRAVFVDLEPTVI 446
Score = 161 bits (392), Expect = 1e-40
Identities = 70/74 (94%), Positives = 73/74 (98%)
Frame = +2
Query: 38 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 217
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 218 VPRAVFVDLEPTVL 259
VPRAVF DLEPTV+
Sbjct: 866 VPRAVFADLEPTVV 879
Score = 68.9 bits (161), Expect = 1e-12
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDEVRTGTYRQLFH EQLITGKEDAANNYARG
Sbjct: 879 VDEVRTGTYRQLFHPEQLITGKEDAANNYARG 910
Score = 68.5 bits (160), Expect = 1e-12
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+DEVRTGTYRQLFH EQLITGKEDAANNYARG
Sbjct: 446 IDEVRTGTYRQLFHPEQLITGKEDAANNYARG 477
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 162 bits (393), Expect = 8e-41
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 215 HVPRAVFVDLEPTVL 259
HVPRAVF DLEPTV+
Sbjct: 61 HVPRAVFCDLEPTVV 75
Score = 68.9 bits (161), Expect = 1e-12
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDEVRTGTYRQLFH EQLITGKEDAANNYARG
Sbjct: 75 VDEVRTGTYRQLFHPEQLITGKEDAANNYARG 106
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 161 bits (391), Expect = 1e-40
Identities = 68/74 (91%), Positives = 74/74 (100%)
Frame = +2
Query: 38 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 217
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 218 VPRAVFVDLEPTVL 259
VPRAVFVDLEP+V+
Sbjct: 480 VPRAVFVDLEPSVI 493
Score = 132 bits (318), Expect = 1e-31
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 80 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVL 259
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVF DLEPTV+
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Score = 68.9 bits (161), Expect = 1e-12
Identities = 31/32 (96%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDEVRTGTYRQLFH EQLITGKEDAANNYARG
Sbjct: 60 VDEVRTGTYRQLFHPEQLITGKEDAANNYARG 91
Score = 68.1 bits (159), Expect = 2e-12
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+DE+RTGTYRQLFH EQLITGKEDAANNYARG
Sbjct: 493 IDEIRTGTYRQLFHPEQLITGKEDAANNYARG 524
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 161 bits (391), Expect = 1e-40
Identities = 71/77 (92%), Positives = 74/77 (96%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 215 HVPRAVFVDLEPTVLMR 265
HVPRAVFVDLEP+V+ R
Sbjct: 61 HVPRAVFVDLEPSVVGR 77
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 5e-27
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 215 H 217
H
Sbjct: 256 H 256
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 85.8 bits (203), Expect = 9e-18
Identities = 37/40 (92%), Positives = 40/40 (100%)
Frame = +2
Query: 140 MPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVL 259
MP+DKTIGGGDDSFNTFF+ETGAGKHVPRAVFVDLEPTV+
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVI 40
Score = 65.7 bits (153), Expect = 1e-11
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+DE+RTGTYRQLFH EQL++GKEDAANNYARG
Sbjct: 40 IDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 70.5 bits (165), Expect = 4e-13
Identities = 33/42 (78%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Frame = +1
Query: 229 CLRRS*TYCV-DEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
C+R + C+ DEVRTGTYRQLFH EQLITGKEDAANNYARG
Sbjct: 2 CIRGAWIVCLADEVRTGTYRQLFHPEQLITGKEDAANNYARG 43
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 66.1 bits (154), Expect = 8e-12
Identities = 34/77 (44%), Positives = 42/77 (54%)
Frame = +2
Query: 20 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 199
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 266
Query: 200 TGAGKHVPRAVFVDLEP 250
GK+VPRAV VDLEP
Sbjct: 267 ATGGKYVPRAVLVDLEP 283
Score = 33.9 bits (74), Expect = 0.037
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+D VR+G + Q+F + + G+ A NN+A+G
Sbjct: 286 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 317
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 64.9 bits (151), Expect = 2e-11
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 262 EVRTGTYRQLFHAEQLITGKEDAANNYARG 351
EVRTGTYRQLFH EQLITGKEDAANNYARG
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARG 31
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 64.9 bits (151), Expect = 2e-11
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 262 EVRTGTYRQLFHAEQLITGKEDAANNYARG 351
EVRTGTYRQLFH EQLITGKEDAANNYARG
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARG 31
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 64.5 bits (150), Expect = 2e-11
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 215 HVPRAVFVDLEP 250
+VPR+V +DLEP
Sbjct: 59 YVPRSVLIDLEP 70
Score = 33.9 bits (74), Expect = 0.037
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+D VR+G + Q+F + + G+ A NN+A+G
Sbjct: 73 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 104
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 62.9 bits (146), Expect = 7e-11
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 215 HVPRAVFVDLEP 250
+VPRA+ VDLEP
Sbjct: 59 YVPRAILVDLEP 70
Score = 33.9 bits (74), Expect = 0.037
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+D VR+G + Q+F + + G+ A NN+A+G
Sbjct: 73 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 104
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 62.9 bits (146), Expect = 7e-11
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 215 HVPRAVFVDLEP 250
+VPRA+ VDLEP
Sbjct: 59 YVPRAILVDLEP 70
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 62.1 bits (144), Expect = 1e-10
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +1
Query: 262 EVRTGTYRQLFHAEQLITGKEDAANNYARG 351
E+RTGTYRQLFH EQL++GKEDAANNYARG
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARG 31
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 60.1 bits (139), Expect = 5e-10
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+DEVRTG YR L+H EQ+I+GKEDAANNYARG
Sbjct: 986 IDEVRTGMYRYLYHPEQMISGKEDAANNYARG 1017
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +2
Query: 194 SETGAGKHVPRAVFVDLEPTVL 259
SE AGK+VPRAV VDLEPTV+
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVI 986
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 59.3 bits (137), Expect = 9e-10
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = +1
Query: 262 EVRTGTYRQLFHAEQLITGKEDAANNYARG 351
EVR GTYR LFH +QLITGKEDAANNYARG
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARG 31
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 33.9 bits (74), Expect = 0.037
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+D VR+G + Q+F + + G+ A NN+A+G
Sbjct: 18 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 49
Score = 29.5 bits (63), Expect = 0.80
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 209 GKHVPRAVFVDLEP 250
GK+VPRAV VDLEP
Sbjct: 2 GKYVPRAVLVDLEP 15
>SB_33002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 31.1 bits (67), Expect = 0.26
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -1
Query: 351 TTGIVVGRIFLTSNKLFCMKQLSVCASADLI 259
+TGIVV I S+KL +++L+V +SA+LI
Sbjct: 2 STGIVVSSILFASDKLLRVEKLAVSSSANLI 32
>SB_51769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 29.5 bits (63), Expect = 0.80
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = -1
Query: 351 TTGIVVGRIFLTSNKLFCMKQLSVC 277
+T ++VG I S++LF M++L++C
Sbjct: 2 STSVIVGSILFASDELFRMEELAIC 26
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 29.5 bits (63), Expect = 0.80
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 38 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 211
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 212 KHVP-RAVFVDLEP 250
KH P R V L P
Sbjct: 296 KHAPVRTFSVTLRP 309
>SB_28844| Best HMM Match : SpoVT_AbrB (HMM E-Value=4.7)
Length = 592
Score = 29.5 bits (63), Expect = 0.80
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = +2
Query: 218 VPRAVFVDLEPTVLMRSALAHTDSCFM---QNNLLLVRKMR 331
+ +AVF + P +M ++ A D+CF QN LL+R M+
Sbjct: 101 ISQAVFYKMRPHYMMLASFACRDTCFCQHHQNMALLLRSMK 141
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 95 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 199
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 170 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 60
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 28.7 bits (61), Expect = 1.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+D VR G +F + + + AANN+A+G
Sbjct: 29 MDAVRGGPLGNMFRPDNFVNSQSGAANNWAKG 60
Score = 26.6 bits (56), Expect = 5.7
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2
Query: 209 GKHVPRAVFVDLEP 250
G++VPR++ VDLEP
Sbjct: 13 GRYVPRSILVDLEP 26
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -1
Query: 255 TVGSRSTKTARGTCLPAPVSLKKV-LKESSPPPMVLSVGI 139
T +R+ RGTCLP+ L++V LK+ + LSVG+
Sbjct: 749 TPRTRAMVICRGTCLPSRDMLRRVLLKKGAREQGTLSVGV 788
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 116 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAV 232
+GI+PDGQ D+ +NT F G P A+
Sbjct: 708 NGIRPDGQGLVDEGFKTASGIYNTCFERLGMNFQTPEAI 746
>SB_37793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 218 VPRAVFVDLEPTVLMRSALAHTDSCFM---QNNLLLVRKMR 331
+ +AVF + P +M ++ A D+C QN LL+R M+
Sbjct: 224 ISQAVFYKMRPPYMMLASFACRDTCLCQHHQNMALLLRSMK 264
>SB_42833| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05)
Length = 641
Score = 26.6 bits (56), Expect = 5.7
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -1
Query: 276 ASADLINTVGSRSTKTARGTCLPAPVSLKKVLKESSPPPMVLSVGIWPSGW 124
A D + +GSRS + +P+P + +K+ + PP V + W
Sbjct: 513 ARRDCLPLIGSRSRSLSNPQPVPSPTNRQKIRVKFEPPYFQEKVRLQGQDW 563
>SB_24478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 747
Score = 26.6 bits (56), Expect = 5.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 4 HLSIEKNSNQNA*VHLCTRWPSRSPDR*CLLGALLP 111
HLS E Q V+ C RW R P C + +++P
Sbjct: 466 HLSREVGRGQYGVVYACDRWAGRHP---CAIKSVVP 498
>SB_50345| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1021
Score = 26.2 bits (55), Expect = 7.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -1
Query: 315 SNKLFCMKQLSVCASADLINTVGSRSTKTARGTCLPAPVSLKKVLKESSP 166
S K++ +++ S ++++TVG T +G P P K L+ +SP
Sbjct: 858 SKKMYSQATINMYPSNEMLDTVGRGKTSQGQGQAPPLP--NKTCLQMNSP 905
>SB_47057| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.94)
Length = 969
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 116 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHV 220
HG+ P +M T+ GGD N S G+ K++
Sbjct: 716 HGLTPTSEMETETEGEGGDADNNEETSLDGSSKNI 750
>SB_4658| Best HMM Match : HTH_psq (HMM E-Value=0)
Length = 1595
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 258 NTVGSRSTKTARGTCLP-APVSLKKVLKESSPPP 160
+T+G R T R CLP V++K V+ + P P
Sbjct: 630 STLGDRVLTTRRNKCLPKKKVNIKAVVIKEEPNP 663
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 26.2 bits (55), Expect = 7.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 244 KIDEDSTGYVLASSGLAEESVERIVSTPDGLVC 146
K+ + STG +L S G + V I +PD ++C
Sbjct: 952 KVWDASTGELLLSLGRHPDVVRSISFSPDNMIC 984
>SB_5056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 726
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 217 VLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPA 92
+ LA S+E+ PD V GH+ IR + K+ A
Sbjct: 550 IFGEDALANVSIEKPYGQPDAPVVGHVRIRAKSQQSPPKIRA 591
>SB_53506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 25.8 bits (54), Expect = 9.9
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +3
Query: 6 FKHRKKLKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPS 161
+KHRKK K+KC + + A + ++ + + ++ PQ P+
Sbjct: 263 YKHRKKAKTKCSNEQVQKGAASTANETKGHAISSSQNHTAGIVIHVPQPPPA 314
>SB_38437| Best HMM Match : VWA (HMM E-Value=0)
Length = 3445
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -1
Query: 258 NTVGSRSTKTARGTCLPAPVSLKKVLKESSPPPMVLSVGIWP 133
+T+G R C P PV++K + +P P + ++P
Sbjct: 3030 STLGVILRSIKRTLCEPVPVTIKPTVPTRTPVPRPPAAAVYP 3071
>SB_7097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 25.8 bits (54), Expect = 9.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 149 DKTIGGGDDSFNTFFSETGAGKHVPR 226
DKT+ GD + NT + +H+P+
Sbjct: 129 DKTVMDGDGNLNTLVDDYEVMRHIPK 154
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,032,941
Number of Sequences: 59808
Number of extensions: 277857
Number of successful extensions: 816
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 741
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 535585339
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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