Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0059
         (351 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    50   2e-08
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   0.17 
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    23   3.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   4.4  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    22   5.8  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          22   7.6  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 50.4 bits (115), Expect = 2e-08
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +2

Query: 35  MRECISVHVGQAGVQIGNACWE 100
           MRECISVHVGQAGVQIGN CW+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22



 Score = 39.5 bits (88), Expect = 4e-05
 Identities = 22/46 (47%), Positives = 24/46 (52%)
 Frame = +3

Query: 90  PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPV 227
           P    T WS AS+   RCP+TR S      ST SS R   AST PV
Sbjct: 19  PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPV 64


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect(2) = 0.17
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 141 CPQTRPSGVETILSTLSSARPELAS 215
           C   RPS ++   ++ S  RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188



 Score = 21.8 bits (44), Expect(2) = 0.17
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 84  VMPAGSFTAWSTASSLMARCPQTRPSGV 167
           V+ AG F AW TA        +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 163 GWRRFFQHFLQRDRSWQAR 219
           GW   + HF QR R W  R
Sbjct: 12  GWLWIYLHFNQRYRFWVER 30


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 64   PSRSPDR*CLLGALLPGARHPA*WPDAHRQDHR 162
            P+  P +  L+  +LP +  PA  P   R+D R
Sbjct: 1107 PAVEPAKKTLVATILPNSAKPAQQPPPLRRDAR 1139


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 191 RKC*KNRLHPRWSCLWASGHQAGCRAPGSKAPSRHYR 81
           RK   +R +PR     + G    CR+P ++  SR  R
Sbjct: 248 RKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTR 284


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +2

Query: 152  KTIGGGDDSFNTFFSET 202
            +TIG  ++SF+++ SET
Sbjct: 1082 QTIGAREESFSSYRSET 1098


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,008
Number of Sequences: 2352
Number of extensions: 8988
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25364985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)