Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0059
(351 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 150 2e-37
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 150 2e-37
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 150 2e-37
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 148 1e-36
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 134 2e-32
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 130 4e-31
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 129 6e-31
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 129 6e-31
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 128 1e-30
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 128 1e-30
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 126 3e-30
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 126 3e-30
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 119 5e-28
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 116 5e-27
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 103 5e-23
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 76 8e-15
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 70 4e-13
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 70 4e-13
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 70 5e-13
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 69 1e-12
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 68 2e-12
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 64 4e-11
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 62 1e-10
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 62 1e-10
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 54 3e-08
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 54 3e-08
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.13
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 27 2.9
Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical pr... 26 6.6
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 26 6.6
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 26 6.6
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 26 6.6
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 26 6.6
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 26 6.6
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 26 6.6
U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical p... 26 8.7
U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical p... 26 8.7
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 26 8.7
AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical ... 26 8.7
AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear recep... 26 8.7
AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear recep... 26 8.7
AC090999-24|AAK26151.1| 502|Caenorhabditis elegans Hypothetical... 26 8.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 150 bits (364), Expect = 2e-37
Identities = 63/75 (84%), Positives = 72/75 (96%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 215 HVPRAVFVDLEPTVL 259
HVPRAV VDLEPTV+
Sbjct: 61 HVPRAVMVDLEPTVI 75
Score = 66.1 bits (154), Expect = 7e-12
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+DE+RTGTYR LFH EQLITGKEDAANNYARG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 150 bits (364), Expect = 2e-37
Identities = 63/75 (84%), Positives = 72/75 (96%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 215 HVPRAVFVDLEPTVL 259
HVPRAV VDLEPTV+
Sbjct: 61 HVPRAVMVDLEPTVI 75
Score = 66.1 bits (154), Expect = 7e-12
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+DE+RTGTYR LFH EQLITGKEDAANNYARG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 150 bits (364), Expect = 2e-37
Identities = 63/75 (84%), Positives = 72/75 (96%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 215 HVPRAVFVDLEPTVL 259
HVPRAV VDLEPTV+
Sbjct: 61 HVPRAVMVDLEPTVI 75
Score = 66.1 bits (154), Expect = 7e-12
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+DE+RTGTYR LFH EQLITGKEDAANNYARG
Sbjct: 75 IDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 148 bits (359), Expect = 1e-36
Identities = 62/74 (83%), Positives = 71/74 (95%)
Frame = +2
Query: 38 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 217
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 218 VPRAVFVDLEPTVL 259
VPRAV VDLEPTV+
Sbjct: 61 VPRAVMVDLEPTVI 74
Score = 66.1 bits (154), Expect = 7e-12
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+DE+RTGTYR LFH EQLITGKEDAANNYARG
Sbjct: 74 IDEIRTGTYRSLFHPEQLITGKEDAANNYARG 105
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 134 bits (324), Expect = 2e-32
Identities = 57/75 (76%), Positives = 65/75 (86%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 215 HVPRAVFVDLEPTVL 259
HVPRA+FVDLEPTV+
Sbjct: 61 HVPRAIFVDLEPTVI 75
Score = 62.9 bits (146), Expect = 6e-11
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+DEVRTGTY +LFH EQLI+GKEDAANNYARG
Sbjct: 75 IDEVRTGTYAKLFHPEQLISGKEDAANNYARG 106
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 130 bits (313), Expect = 4e-31
Identities = 56/74 (75%), Positives = 64/74 (86%)
Frame = +2
Query: 32 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 211
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 212 KHVPRAVFVDLEPT 253
KHVPRA+ VDLEPT
Sbjct: 65 KHVPRAIMVDLEPT 78
Score = 63.7 bits (148), Expect = 4e-11
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+DE+RTGTY+ LFH EQL+TGKEDAANNYARG
Sbjct: 80 IDEIRTGTYKTLFHPEQLLTGKEDAANNYARG 111
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 129 bits (311), Expect = 6e-31
Identities = 57/75 (76%), Positives = 66/75 (88%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 215 HVPRAVFVDLEPTVL 259
+VPR++FVDLEPTV+
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 64.9 bits (151), Expect = 2e-11
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDE+RTGTY++LFH EQ+ITGKEDAANNYARG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 129 bits (311), Expect = 6e-31
Identities = 57/75 (76%), Positives = 66/75 (88%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 215 HVPRAVFVDLEPTVL 259
+VPR++FVDLEPTV+
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 64.9 bits (151), Expect = 2e-11
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDE+RTGTY++LFH EQ+ITGKEDAANNYARG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 128 bits (308), Expect = 1e-30
Identities = 56/75 (74%), Positives = 66/75 (88%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 215 HVPRAVFVDLEPTVL 259
+VPR++FVDLEPTV+
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 64.9 bits (151), Expect = 2e-11
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDE+RTGTY++LFH EQ+ITGKEDAANNYARG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 128 bits (308), Expect = 1e-30
Identities = 56/75 (74%), Positives = 66/75 (88%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 215 HVPRAVFVDLEPTVL 259
+VPR++FVDLEPTV+
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 64.9 bits (151), Expect = 2e-11
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDE+RTGTY++LFH EQ+ITGKEDAANNYARG
Sbjct: 73 VDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 126 bits (305), Expect = 3e-30
Identities = 56/75 (74%), Positives = 66/75 (88%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 215 HVPRAVFVDLEPTVL 259
+VPR++FVDLEPTV+
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 62.9 bits (146), Expect = 6e-11
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDE+RTG Y++LFH EQ+ITGKEDAANNYARG
Sbjct: 73 VDEIRTGNYKKLFHPEQMITGKEDAANNYARG 104
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 126 bits (305), Expect = 3e-30
Identities = 56/75 (74%), Positives = 66/75 (88%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 215 HVPRAVFVDLEPTVL 259
+VPR++FVDLEPTV+
Sbjct: 59 YVPRSIFVDLEPTVV 73
Score = 62.9 bits (146), Expect = 6e-11
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDE+RTG Y++LFH EQ+ITGKEDAANNYARG
Sbjct: 73 VDEIRTGNYKKLFHPEQMITGKEDAANNYARG 104
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 119 bits (287), Expect = 5e-28
Identities = 56/92 (60%), Positives = 63/92 (68%)
Frame = +2
Query: 38 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 217
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 218 VPRAVFVDLEPTVLMRSALAHTDSCFMQNNLL 313
VPR +FVDLEPTV+ S F LL
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLL 99
Score = 60.9 bits (141), Expect = 3e-10
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDEVRTGTYR LFH EQL++GKEDAAN YARG
Sbjct: 81 VDEVRTGTYRSLFHPEQLLSGKEDAANCYARG 112
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 116 bits (279), Expect = 5e-27
Identities = 53/75 (70%), Positives = 59/75 (78%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 215 HVPRAVFVDLEPTVL 259
HVPR++FVDLEPTV+
Sbjct: 58 HVPRSIFVDLEPTVV 72
Score = 62.1 bits (144), Expect = 1e-10
Identities = 25/32 (78%), Positives = 30/32 (93%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDE+RTG Y++LFH EQ++TGKEDAANNYARG
Sbjct: 72 VDEIRTGAYKKLFHPEQMLTGKEDAANNYARG 103
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 103 bits (246), Expect = 5e-23
Identities = 44/74 (59%), Positives = 55/74 (74%)
Frame = +2
Query: 38 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 217
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 218 VPRAVFVDLEPTVL 259
VPRA++VDLEPTVL
Sbjct: 65 VPRAIYVDLEPTVL 78
Score = 54.4 bits (125), Expect = 2e-08
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+DE+R G Y LFH +Q+I GKEDAANNYARG
Sbjct: 78 LDEIRNGVYGNLFHPDQIINGKEDAANNYARG 109
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 75.8 bits (178), Expect = 8e-15
Identities = 36/71 (50%), Positives = 43/71 (60%)
Frame = +2
Query: 101 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVLMRSALAH 280
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTV+
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 281 TDSCFMQNNLL 313
S F LL
Sbjct: 61 YRSLFHPEQLL 71
Score = 60.9 bits (141), Expect = 3e-10
Identities = 27/32 (84%), Positives = 29/32 (90%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
VDEVRTGTYR LFH EQL++GKEDAAN YARG
Sbjct: 53 VDEVRTGTYRSLFHPEQLLSGKEDAANCYARG 84
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 70.1 bits (164), Expect = 4e-13
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 215 HVPRAVFVDLEP 250
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
Score = 34.3 bits (75), Expect = 0.025
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+D VR+G + QLF + + G+ A NN+A+G
Sbjct: 73 MDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG 104
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 70.1 bits (164), Expect = 4e-13
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 215 HVPRAVFVDLEP 250
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
Score = 34.3 bits (75), Expect = 0.025
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+D VR+G + QLF + + G+ A NN+A+G
Sbjct: 73 MDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG 104
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 69.7 bits (163), Expect = 5e-13
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 215 HVPRAVFVDLEP 250
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
Score = 34.7 bits (76), Expect = 0.019
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+D VR+G + QLF + + G+ A NN+A+G
Sbjct: 73 MDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG 104
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 68.5 bits (160), Expect = 1e-12
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 215 HVPRAVFVDLEP 250
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
Score = 34.7 bits (76), Expect = 0.019
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+D VR+G + QLF + + G+ A NN+A+G
Sbjct: 73 MDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG 104
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 68.1 bits (159), Expect = 2e-12
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 215 HVPRAVFVDLEP 250
+VPRAV VDLEP
Sbjct: 59 YVPRAVLVDLEP 70
Score = 34.7 bits (76), Expect = 0.019
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+D VR+G + QLF + + G+ A NN+A+G
Sbjct: 73 MDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG 104
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 63.7 bits (148), Expect = 4e-11
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 215 HVPRAVFVDLEP 250
+VPRA VDLEP
Sbjct: 59 YVPRACLVDLEP 70
Score = 34.3 bits (75), Expect = 0.025
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
+D VR G + QLF + + G+ A NN+A+G
Sbjct: 73 MDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKG 104
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 62.1 bits (144), Expect = 1e-10
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 215 HVPRAVFVDLEP 250
+VPRA+ VDL+P
Sbjct: 59 YVPRAILVDLDP 70
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
++ VR+ Y +LF E ++G+ A NN++RG
Sbjct: 73 INYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 62.1 bits (144), Expect = 1e-10
Identities = 31/72 (43%), Positives = 41/72 (56%)
Frame = +2
Query: 35 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 214
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 215 HVPRAVFVDLEP 250
+VPRA+ VDL+P
Sbjct: 59 YVPRAILVDLDP 70
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 256 VDEVRTGTYRQLFHAEQLITGKEDAANNYARG 351
++ VR+ Y +LF E ++G+ A NN++RG
Sbjct: 73 INYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 54.0 bits (124), Expect = 3e-08
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Frame = +2
Query: 47 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 226
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 227 AVFVDLEPTV---LMRSA----LAHTDSCFMQNN 307
AV VDLEP V +M+S L +TD+ FM ++
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDH 98
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 54.0 bits (124), Expect = 3e-08
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Frame = +2
Query: 47 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 226
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 227 AVFVDLEPTV---LMRSA----LAHTDSCFMQNN 307
AV VDLEP V +M+S L +TD+ FM ++
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDH 98
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 63 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 218
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 110 LEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVLMRSAL 274
L H Q D +P + +GGG +F+ + +HV + F D E R +
Sbjct: 29 LNHLGQVDN-IPNNSAVGGGGAAFHHLHTSAATPRHVATSEFYDDEEATSPRGGI 82
>Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical
protein ZK673.4 protein.
Length = 476
Score = 26.2 bits (55), Expect = 6.6
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Frame = -1
Query: 258 NTVGSRSTKTARGTCLPAPVSL--------KKVLKESSPPPMVLSVGIWPSGWMPCSRQ* 103
+T +T TA T P P + KKV K S PP VL+ G + W R
Sbjct: 365 STSSYMATATATATATPFPSKMTVLTLANGKKVTKAPSLPPSVLNSGKLVT-WKVSRRTH 423
Query: 102 SSQQALPIWTPAWP 61
S + P +P+ P
Sbjct: 424 GSTSSTPRASPSLP 437
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -1
Query: 246 SRSTKTARGTCLPAPVSLKKVLKESSPPPMVLSVGIWPSGWMPCS 112
+ S+KT + P P S KK P++ +V + PCS
Sbjct: 465 TESSKTRKAQVKPTPTSEKKKESRELQKPIIATVQVPTESSHPCS 509
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 77 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETG 205
QI +C CL +G++P G P I G FF+++G
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSG 101
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 77 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETG 205
QI +C CL +G++P G P I G FF+++G
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSG 119
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 77 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETG 205
QI +C CL +G++P G P I G FF+++G
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSG 101
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -1
Query: 246 SRSTKTARGTCLPAPVSLKKVLKESSPPPMVLSVGIWPSGWMPCS 112
+ S+KT + P P S KK P++ +V + PCS
Sbjct: 407 TESSKTRKAQVKPTPTSEKKKESRELQKPIIATVQVPTESSHPCS 451
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -1
Query: 246 SRSTKTARGTCLPAPVSLKKVLKESSPPPMVLSVGIWPSGWMPCS 112
+ S+KT + P P S KK P++ +V + PCS
Sbjct: 589 TESSKTRKAQVKPTPTSEKKKESRELQKPIIATVQVPTESSHPCS 633
>U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical
protein F36D4.5b protein.
Length = 315
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 63 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSA 197
++ +SRS P F W+T + + QT P+G T++ S++
Sbjct: 248 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSAS 291
>U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical
protein F36D4.5a protein.
Length = 334
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 63 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSA 197
++ +SRS P F W+T + + QT P+G T++ S++
Sbjct: 267 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSAS 310
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 134 GQMPTDKTIGGGDDSFNTFFSE 199
GQMPTDK + S NT +S+
Sbjct: 156 GQMPTDKNVNSVITSDNTTYSD 177
>AL021387-2|CAA16168.1| 463|Caenorhabditis elegans Hypothetical
protein H01A20.1 protein.
Length = 463
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 59 VGQAGVQIGNACWELYCLEHGIQPDGQMP-TDKT 157
+ +AG + +C CLE G++PD P DKT
Sbjct: 97 IDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKT 130
>AF273769-1|AAG15118.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 59 VGQAGVQIGNACWELYCLEHGIQPDGQMP-TDKT 157
+ +AG + +C CLE G++PD P DKT
Sbjct: 97 IDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKT 130
>AF083222-1|AAD03680.1| 463|Caenorhabditis elegans nuclear receptor
NHR-3 protein.
Length = 463
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 59 VGQAGVQIGNACWELYCLEHGIQPDGQMP-TDKT 157
+ +AG + +C CLE G++PD P DKT
Sbjct: 97 IDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKT 130
>AC090999-24|AAK26151.1| 502|Caenorhabditis elegans Hypothetical
protein Y82E9BR.1 protein.
Length = 502
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 192 KKVLKESSPPPMVLSVGIWP 133
K +L + PP+ LS+ IWP
Sbjct: 61 KAILTDGEHPPLSLSIVIWP 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,359,243
Number of Sequences: 27780
Number of extensions: 203114
Number of successful extensions: 615
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -