Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0058
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 216 9e-57
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 216 9e-57
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 216 9e-57
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 216 9e-57
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 216 9e-57
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 216 9e-57
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 215 2e-56
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 213 7e-56
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 204 3e-53
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 177 4e-45
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 124 5e-29
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 111 3e-25
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 108 3e-24
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 108 3e-24
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 107 6e-24
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 107 6e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 87 1e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 72 3e-13
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 60 1e-09
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 28 6.3
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 28 6.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.3
AF024500-5|AAB70362.1| 288|Caenorhabditis elegans Hypothetical ... 28 6.3
Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical pr... 27 8.4
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 27 8.4
AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical... 27 8.4
AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical... 27 8.4
AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical... 27 8.4
AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical... 27 8.4
AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical... 27 8.4
AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical ... 27 8.4
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 8.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 8.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 8.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 8.4
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 216 bits (528), Expect = 9e-57
Identities = 110/164 (67%), Positives = 118/164 (71%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRRTLM*EMRHR 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 AKXXXXXXXXXXXXXXXLTGMTWRRFWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 468
+K + WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 469 TQIMFETFNTPAMSLASKPVLSLYAFRSFHRYRAWTSGDGVFHT 600
TQIMFETFNTPAM +A + VLSLYA SGDGV HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDSGDGVTHT 163
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 216 bits (528), Expect = 9e-57
Identities = 110/164 (67%), Positives = 118/164 (71%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRRTLM*EMRHR 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 AKXXXXXXXXXXXXXXXLTGMTWRRFWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 468
+K + WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 469 TQIMFETFNTPAMSLASKPVLSLYAFRSFHRYRAWTSGDGVFHT 600
TQIMFETFNTPAM +A + VLSLYA SGDGV HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDSGDGVTHT 163
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 216 bits (528), Expect = 9e-57
Identities = 110/164 (67%), Positives = 118/164 (71%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRRTLM*EMRHR 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 AKXXXXXXXXXXXXXXXLTGMTWRRFWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 468
+K + WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 469 TQIMFETFNTPAMSLASKPVLSLYAFRSFHRYRAWTSGDGVFHT 600
TQIMFETFNTPAM +A + VLSLYA SGDGV HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDSGDGVTHT 163
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 216 bits (528), Expect = 9e-57
Identities = 110/164 (67%), Positives = 118/164 (71%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRRTLM*EMRHR 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 AKXXXXXXXXXXXXXXXLTGMTWRRFWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 468
+K + WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 469 TQIMFETFNTPAMSLASKPVLSLYAFRSFHRYRAWTSGDGVFHT 600
TQIMFETFNTPAM +A + VLSLYA SGDGV HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDSGDGVTHT 163
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 216 bits (528), Expect = 9e-57
Identities = 110/164 (67%), Positives = 118/164 (71%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRRTLM*EMRHR 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 AKXXXXXXXXXXXXXXXLTGMTWRRFWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 468
+K + WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 469 TQIMFETFNTPAMSLASKPVLSLYAFRSFHRYRAWTSGDGVFHT 600
TQIMFETFNTPAM +A + VLSLYA SGDGV HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDSGDGVTHT 163
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 216 bits (528), Expect = 9e-57
Identities = 110/164 (67%), Positives = 118/164 (71%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRRTLM*EMRHR 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 AKXXXXXXXXXXXXXXXLTGMTWRRFWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 468
+K + WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 469 TQIMFETFNTPAMSLASKPVLSLYAFRSFHRYRAWTSGDGVFHT 600
TQIMFETFNTPAM +A + VLSLYA SGDGV HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGV-VLDSGDGVTHT 163
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 215 bits (525), Expect = 2e-56
Identities = 109/164 (66%), Positives = 118/164 (71%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRRTLM*EMRHR 288
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++ +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 AKXXXXXXXXXXXXXXXLTGMTWRRFWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 468
+K + WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 469 TQIMFETFNTPAMSLASKPVLSLYAFRSFHRYRAWTSGDGVFHT 600
TQIMFETFNTPAM +A + VLSLYA SGDGV HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI-VLDSGDGVTHT 163
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 213 bits (521), Expect = 7e-56
Identities = 107/164 (65%), Positives = 118/164 (71%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRRTLM*EMRHR 288
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++ +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 289 AKXXXXXXXXXXXXXXXLTGMTWRRFWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 468
+K + WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 469 TQIMFETFNTPAMSLASKPVLSLYAFRSFHRYRAWTSGDGVFHT 600
TQIMFETFNTPAM +A + VLSLYA SGDGV HT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGI-VLDSGDGVTHT 163
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 204 bits (499), Expect = 3e-53
Identities = 103/162 (63%), Positives = 115/162 (70%)
Frame = +1
Query: 115 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRRTLM*EMRHRAK 294
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++ ++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 295 XXXXXXXXXXXXXXXLTGMTWRRFWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 474
+ WHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 475 IMFETFNTPAMSLASKPVLSLYAFRSFHRYRAWTSGDGVFHT 600
IMFETFNTPAM + + VLSLYA +GDGV HT
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGI-VLDTGDGVTHT 162
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 177 bits (432), Expect = 4e-45
Identities = 92/146 (63%), Positives = 100/146 (68%)
Frame = +1
Query: 163 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRRTLM*EMRHRAKXXXXXXXXXXXXXXXL 342
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++ ++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 343 TGMTWRRFWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMSLASK 522
+ WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM +A +
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 523 PVLSLYAFRSFHRYRAWTSGDGVFHT 600
VLSLYA SGDGV HT
Sbjct: 125 AVLSLYASGRTTGV-VLDSGDGVTHT 149
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 124 bits (299), Expect = 5e-29
Identities = 61/80 (76%), Positives = 64/80 (80%)
Frame = +1
Query: 361 RFWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMSLASKPVLSLY 540
+ WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM +A + VLSLY
Sbjct: 41 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 100
Query: 541 AFRSFHRYRAWTSGDGVFHT 600
A SGDGV HT
Sbjct: 101 ASGRTTGV-VLDSGDGVTHT 119
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 42
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 111 bits (268), Expect = 3e-25
Identities = 61/156 (39%), Positives = 84/156 (53%), Gaps = 1/156 (0%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRRTLM*EMRHRAKXXXXXX 312
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G + + +
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 313 XXXXXXXXXLTGMTWRRFWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 489
+ W + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 490 FNTPAMSLASKPVLSLYAFRSFHRYRAWTSGDGVFH 597
FN PA+ + + VLSLYA SGDGV H
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGV-VLDSGDGVTH 165
Score = 55.2 bits (127), Expect = 4e-08
Identities = 20/35 (57%), Positives = 29/35 (82%)
Frame = +3
Query: 261 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
D ++G +A+S RG+ +++YP+EHGIV NW DMEKI
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKI 88
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 108 bits (260), Expect = 3e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 108 bits (260), Expect = 3e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 107 bits (257), Expect = 6e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 107 bits (257), Expect = 6e-24
Identities = 47/51 (92%), Positives = 51/51 (100%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGRR 261
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG++
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +3
Query: 252 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 356
GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 86.6 bits (205), Expect = 1e-17
Identities = 59/158 (37%), Positives = 80/158 (50%), Gaps = 3/158 (1%)
Frame = +1
Query: 133 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VG-MGRRTLM*EMRHRAKXXXX 306
+VVDNG+G K G+AG + P +FPS+VGRP + VG + + LM
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 307 XXXXXXXXXXXLTGMTWRRFWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 483
W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 484 ETFNTPAMSLASKPVLSLYAFRSFHRYRAWTSGDGVFH 597
E + ++ +A + VL+LYA + SGDGV H
Sbjct: 129 EQYGFNSIYVAVQAVLTLYA-QGLLTGVVVDSGDGVTH 165
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +3
Query: 237 RDGRYGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 365
R G KD VG+E R +L + YP+++GIV NWDDM +
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHV 88
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 72.1 bits (169), Expect = 3e-13
Identities = 59/183 (32%), Positives = 80/183 (43%), Gaps = 20/183 (10%)
Frame = +1
Query: 109 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQGVM----VGMGR 258
M ++ A V+DNG+G K G+AG+ P+ + PS V Q + VG G
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 259 RTLM*EMRHRAKXXXXXXXXXXXXXXXLTGMTW---RRFWHHTFYNELRVAPEEHPVLLT 429
L + A W R+W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 430 EAPLNPKANREKMTQIMFETFNTPAMSLASKPVLSLYAFRSFH--RYRAWT-----SGDG 588
E PLN NRE +IMFE+FN P + +A + VL+L A + R+ T SGDG
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDG 180
Query: 589 VFH 597
V H
Sbjct: 181 VTH 183
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +3
Query: 261 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEK 362
D ++GDEA S T+KYPI HGIV +WD ME+
Sbjct: 64 DFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMER 98
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1
Query: 373 HTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMSLASKPVLSLYA 543
H++ N L P EHPVL +E+ N +A REK+T+IMFE F PA L+ VLS +A
Sbjct: 111 HSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFA 167
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 118 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 216
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 225 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKI 365
P S ++ +K +V E + +L Y PIE G V NWD ++I
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQI 77
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 225 PPSGRDGRYGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKI 365
P S ++ +K +V E + +L Y PIE G V NWD ++I
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQI 77
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 163 KAGFAGDDAPRAVFPSIVGRPRHQG 237
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF024500-5|AAB70362.1| 288|Caenorhabditis elegans Hypothetical
protein K06H6.2 protein.
Length = 288
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 439 LNPKANREKMTQIMFETFNTPAMSLASKPVLSLYAFRSF 555
L P + + QI E TPA L+ ++S Y FR F
Sbjct: 211 LEPLISEHFVCQIFIEVHGTPAEHLSMLRMMSKYGFRLF 249
>Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical
protein K04B12.2b protein.
Length = 381
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 340 LTGMTWRRFWHHTFYNELRVAPEEHPVLLTEAPL-NPKANREKMTQIMFETF-NTPAMSL 513
+T + W+R N + P + + EA +P ANRE + Q+M E F TPA+ L
Sbjct: 252 ITPIKWQRVTPIFPENTKNIQPPDERIEEDEAEEEDPLANREIVEQLMHEYFIPTPALPL 311
>Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical
protein K04B12.2a protein.
Length = 420
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 340 LTGMTWRRFWHHTFYNELRVAPEEHPVLLTEAPL-NPKANREKMTQIMFETF-NTPAMSL 513
+T + W+R N + P + + EA +P ANRE + Q+M E F TPA+ L
Sbjct: 291 ITPIKWQRVTPIFPENTKNIQPPDERIEEDEAEEEDPLANREIVEQLMHEYFIPTPALPL 350
>Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical
protein B0399.1f protein.
Length = 695
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 491 STRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTPVP 607
+TRPPC P+ S ST + LP + + P+P
Sbjct: 574 NTRPPCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLP 612
>Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 491 STRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTPVP 607
+TRPPC P+ S ST + LP + + P+P
Sbjct: 490 NTRPPCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLP 528
>Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 491 STRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTPVP 607
+TRPPC P+ S ST + LP + + P+P
Sbjct: 559 NTRPPCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLP 597
>Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 491 STRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTPVP 607
+TRPPC P+ S ST + LP + + P+P
Sbjct: 624 NTRPPCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLP 662
>Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 491 STRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTPVP 607
+TRPPC P+ S ST + LP + + P+P
Sbjct: 671 NTRPPCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLP 709
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 388 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMSLASKPVLSLYAF 546
EL+V P ++ VLL+ P ++ QI E + + +P L LYA+
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAY 318
>AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical
protein B0399.1f protein.
Length = 695
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 491 STRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTPVP 607
+TRPPC P+ S ST + LP + + P+P
Sbjct: 574 NTRPPCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLP 612
>AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 491 STRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTPVP 607
+TRPPC P+ S ST + LP + + P+P
Sbjct: 490 NTRPPCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLP 528
>AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 491 STRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTPVP 607
+TRPPC P+ S ST + LP + + P+P
Sbjct: 559 NTRPPCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLP 597
>AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 491 STRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTPVP 607
+TRPPC P+ S ST + LP + + P+P
Sbjct: 624 NTRPPCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLP 662
>AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 491 STRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTPVP 607
+TRPPC P+ S ST + LP + + P+P
Sbjct: 671 NTRPPCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLP 709
>AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical
protein B0399.1c protein.
Length = 555
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 491 STRPPCRWHPSPCSRCTRSGRSTGIVLGLPATVSSTPVP 607
+TRPPC P+ S ST + LP + + P+P
Sbjct: 434 NTRPPCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLP 472
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 188 ASSPAKPALHIPEPLSTTNAATSS 117
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 188 ASSPAKPALHIPEPLSTTNAATSS 117
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 188 ASSPAKPALHIPEPLSTTNAATSS 117
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 188 ASSPAKPALHIPEPLSTTNAATSS 117
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,494,332
Number of Sequences: 27780
Number of extensions: 380822
Number of successful extensions: 1230
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -