Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0057
(647 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 206 9e-54
SB_56| Best HMM Match : Actin (HMM E-Value=0) 206 9e-54
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 206 9e-54
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 206 2e-53
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 197 7e-51
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 124 8e-29
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_54| Best HMM Match : Actin (HMM E-Value=0) 106 1e-23
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 91 9e-19
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 65 4e-11
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 65 5e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 53 2e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_51022| Best HMM Match : Cornifin (HMM E-Value=0.028) 33 0.26
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.61
SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 0.81
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_56804| Best HMM Match : 7tm_1 (HMM E-Value=0) 30 1.9
SB_5494| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.9
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23) 29 2.5
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 4.3
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_38544| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 7.5
SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 7.5
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_24944| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30) 27 9.9
SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10) 27 9.9
SB_18995| Best HMM Match : rve (HMM E-Value=0.0012) 27 9.9
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 27 9.9
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 206 bits (504), Expect = 9e-54
Identities = 103/128 (80%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFN+PAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY-EGYALPHAILRL 178
Query: 616 WTLGRS*T 639
GR T
Sbjct: 179 DLAGRDLT 186
Score = 122 bits (295), Expect = 2e-28
Identities = 55/60 (91%), Positives = 60/60 (100%)
Frame = +2
Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 206 bits (504), Expect = 9e-54
Identities = 103/128 (80%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFN+PAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY-EGYALPHAILRL 178
Query: 616 WTLGRS*T 639
GR T
Sbjct: 179 DLAGRDLT 186
Score = 124 bits (298), Expect = 8e-29
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +2
Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 206 bits (504), Expect = 9e-54
Identities = 103/128 (80%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFN+PAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY-EGYALPHAILRL 179
Query: 616 WTLGRS*T 639
GR T
Sbjct: 180 DLAGRDLT 187
Score = 130 bits (313), Expect = 1e-30
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 206 bits (502), Expect = 2e-53
Identities = 102/128 (79%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFN+PAMYVAIQAVLSLY SGDGV HTVPI ALPHAI+
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY-EGYALPHAIIRL 179
Query: 616 WTLGRS*T 639
GR T
Sbjct: 180 DLAGRDLT 187
Score = 125 bits (302), Expect = 3e-29
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 197 bits (480), Expect = 7e-51
Identities = 93/106 (87%), Positives = 94/106 (88%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPI 573
TQIMFETFN+PAMYVAIQAVLSLY SGDGV HTVPI
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPI 166
Score = 125 bits (302), Expect = 3e-29
Identities = 55/62 (88%), Positives = 61/62 (98%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 124 bits (298), Expect = 8e-29
Identities = 55/60 (91%), Positives = 60/60 (100%)
Frame = +2
Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 72.9 bits (171), Expect = 2e-13
Identities = 42/73 (57%), Positives = 46/73 (63%)
Frame = +1
Query: 421 NREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPH 600
N + M +IMFETFN+PAMYVAIQAVLSLY SGDGV HTVPI ALPH
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIY-EGYALPH 136
Query: 601 AILGFWTLGRS*T 639
AI+ GR T
Sbjct: 137 AIIRLDLAGRDLT 149
Score = 64.1 bits (149), Expect = 9e-11
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 348
SKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 109 bits (262), Expect = 2e-24
Identities = 53/114 (46%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = +1
Query: 262 RGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 438
R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM
Sbjct: 65 RYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMI 124
Query: 439 QIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPH 600
++MFE + +Y+AIQAVL+LY + SGDGV H P+ ALPH
Sbjct: 125 EVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVY-EGFALPH 177
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 95 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 253
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 106 bits (255), Expect = 1e-23
Identities = 55/104 (52%), Positives = 68/104 (65%)
Frame = +1
Query: 328 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 507
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 508 GPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGFWTLGRS*T 639
+ + GDGV HTVP+ LPHA GR T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYD-GYWLPHATQRIDLAGRDLT 2231
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 202
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 90.6 bits (215), Expect = 9e-19
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = +1
Query: 376 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGV 555
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLY +GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 556 FHTVPILPRDTALPHAILGFWTLGR 630
H+VPI A+PH+I+ GR
Sbjct: 186 SHSVPIY-EGFAMPHSIMRTDIAGR 209
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 65.3 bits (152), Expect = 4e-11
Identities = 38/66 (57%), Positives = 41/66 (62%)
Frame = +1
Query: 442 IMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGFWT 621
IMFE FN+PA+YVAIQAVLSLY + SGDGV H VPI ALPHAIL
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIY-EGYALPHAILRLDL 59
Query: 622 LGRS*T 639
GR T
Sbjct: 60 AGRDLT 65
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.9 bits (151), Expect = 5e-11
Identities = 26/74 (35%), Positives = 47/74 (63%)
Frame = +1
Query: 286 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 465
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 466 PAMYVAIQAVLSLY 507
PA ++ +VL+ +
Sbjct: 63 PAFFLCKNSVLTAF 76
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 202
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +2
Query: 71 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 241
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 242 GDEARAK 262
GD A AK
Sbjct: 753 GDAAVAK 759
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 280 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 393
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -2
Query: 199 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 83
MA + D G++ + SI+S E GLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_51022| Best HMM Match : Cornifin (HMM E-Value=0.028)
Length = 312
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -1
Query: 587 VSLGKMGTVWKTPSPEVQHDTGGTTGPYSESTAWMATYMAGVLNVSNMIW 438
V L TVW PS V + GT P T W+ LN S+ +W
Sbjct: 151 VWLNPSDTVWLNPSDTVWLNPSGTVWPNPSDTVWLNPSDTVWLNPSDTVW 200
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -1
Query: 587 VSLGKMGTVWKTPSPEVQHDTGGTTGPYSESTAWMATYMAGVLNVSNMIWV 435
V L TVW PS V + T P T W+ LN S+ +W+
Sbjct: 87 VWLNPSDTVWPNPSGTVWLNPSDTVWPNPSDTVWLNPSDTVWLNPSDTVWL 137
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/49 (34%), Positives = 20/49 (40%)
Frame = -1
Query: 587 VSLGKMGTVWKTPSPEVQHDTGGTTGPYSESTAWMATYMAGVLNVSNMI 441
V L TVW PS V + GT P T W+ +G N N I
Sbjct: 191 VWLNPSDTVWPNPSDTVWPNPSGTVWPNPSDTVWLNP--SGTFNDKNAI 237
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 566 TVWKTPSPEVQHDTGGTTGPYSESTAWMATYMAGVLNVSNMIWV 435
TVW PS V + T P T W+ LN S+ +W+
Sbjct: 46 TVWPNPSGTVWLNPSDTVWPNPSDTVWLNPSDTVWLNPSDTVWL 89
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -1
Query: 569 GTVWKTPSPEVQHDTGGTTGPYSESTAWMATYMAGVLNVSNMIWV 435
GTVW PS V + T T W+ LN S+ +W+
Sbjct: 101 GTVWLNPSDTVWPNPSDTVWLNPSDTVWLNPSDTVWLNPSDTVWL 145
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -1
Query: 587 VSLGKMGTVWKTPSPEVQHDTGGTTGPYSESTAWMATYMAGVLNVSNMIW 438
V L TVW PS V + GT T W+ LN S +W
Sbjct: 127 VWLNPSDTVWLNPSDTVWLNPSGTVWLNPSDTVWLNPSDTVWLNPSGTVW 176
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -1
Query: 569 GTVWKTPSPEVQHDTGGTTGPYSESTAWMATYMAGVLNVSNMIW 438
GTVW PS V + T T W+ LN S+ +W
Sbjct: 53 GTVWLNPSDTVWPNPSDTVWLNPSDTVWLNPSDTVWLNPSDTVW 96
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -1
Query: 587 VSLGKMGTVWKTPSPEVQHDTGGTTGPYSESTAWMATYMAGVLNVSNMIWV 435
V L TVW PS V + T P T W+ N S+ +W+
Sbjct: 71 VWLNPSDTVWLNPSDTVWLNPSDTVWPNPSGTVWLNPSDTVWPNPSDTVWL 121
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 277 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 429
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.61
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 31.1 bits (67), Expect = 0.81
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Frame = +2
Query: 452 KHSTRPPCTSPSK-PCSRCTVRSYHRYRAGLPATVS-STPCPFYRGIP---HFPTP 604
+H PP +S S PC T HR+ PAT S TPC P H P P
Sbjct: 10 RHHPPPPASSSSPTPCYGITPHPLHRHHLPPPATASPPTPCIVIISHPLHRHHPPP 65
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 452 KHSTRPPCT-SPSKPCSRCTVRSYHRYRAGLPATVSSTPCPFYRGIPHFPTP 604
+H PP T SP PC HR+ PA+ SS P +R H P P
Sbjct: 35 RHHLPPPATASPPTPCIVIISHPLHRHHPPPPAS-SSFPHSLHR---HHPPP 82
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 31.1 bits (67), Expect = 0.81
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 446 CSKHSTRPPCTSPSKPCSRCTVRSYHRYRAG 538
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 402 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 494
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_56804| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 345
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 586 YPSVKWARCGRHRRRKSSTIPVVRPDRTARARLGWRRT 473
+ V W RCGR +RRK S + R + R G T
Sbjct: 303 FTRVLWCRCGREKRRKRSGKRISRTALISMERTGLHHT 340
>SB_5494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -2
Query: 586 YPSVKWARCGRHRRRKSSTIPVVRPDRTARARLGWRRT 473
+ V W RCGR +RRK S + R + R G T
Sbjct: 303 FTRVLWCRCGREKRRKRSGKRISRTALISMERTGLHHT 340
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 286 PIEHGIVTNWDDMEKIWHHTFYNE 357
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 89 EVAALVVDNGSGMCKAGFAGDDAPRAV 169
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 349 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPV 516
Y +L V +PV T+ + + N + TQ+M T P Y + V + Y PV
Sbjct: 116 YTQLMVFTRYNPVRYTQLMVFTRYNHVRYTQLMVFTRYNPVRYAQLM-VFTRYNPV 170
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 349 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPV 516
Y EL V +PV TE + + N + Q+M T P Y + V + Y PV
Sbjct: 475 YTELVVFTRYNPVRYTELVVFTRHNPVRYAQLMVFTRYNPVRYAQL-IVFTRYNPV 529
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 349 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPV 516
Y +L V +PV T+ + + N + TQ+M T P Y + V + Y PV
Sbjct: 23 YTQLIVFTRYNPVRYTQLMVFTRYNPVRYTQLMVFTRYNPVRYAQL-IVFTRYNPV 77
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 349 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPV 516
YN L V +PV + + + N + TQ+M T P Y + V + Y PV
Sbjct: 377 YNPLIVFTRYNPVRYAQLMVFTRYNPVRFTQLMVFTRYNPVRYTELM-VFTRYNPV 431
>SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23)
Length = 1105
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 455 HSTRPPCTSPSKPCSRCTVRSYHRYRAGLPATVSSTPCPFYR 580
+ST PP T+P + + ++++YRA AT S C R
Sbjct: 524 NSTSPPTTTPMGQVMKRVMETHNKYRALHNATAMSLSCDMSR 565
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = -2
Query: 175 GKHCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRCD 41
G+HC + I C G GA GN+ E C D
Sbjct: 724 GRHCEKDIDECSLGYCKNGATCTNTPGNYSCQCTEFTNGTNCELD 768
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 199 SGRDGRYGTEGLLCRR*GTSKRGILTLKYPIEHGIVTNW--DDMEKIWHHTFYN 354
+GR+ G+ +CR+ K ++TL + I G+ + D EK+W+HT N
Sbjct: 451 TGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYHTCPN 500
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Frame = +2
Query: 455 HSTRPPCTSPSKPCSR-CTVRSYH---RYRAGLPATVSSTPC 568
HS + PCT PC + C + H + R G P + PC
Sbjct: 1933 HSCQEPCTKNCPPCQKQCENKCEHSKCKNRCGEPCVPCAEPC 1974
>SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 329 FSMSSQLVTIPCSMGYLRVRIPLLLVPHLLHKSPSVP 219
F +S LVT S + + P LLVPH L K S+P
Sbjct: 571 FEISPPLVT---SSSHSLTQSPTLLVPHRLKKKESIP 604
>SB_38544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 935
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +1
Query: 454 TFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAI 606
++NTP +++ +Q +S +G VS W+ H I+ + PH +
Sbjct: 228 SYNTPCLHIILQHAVSPHGLTTCRVSTWSYNMPCLH---IISQHAVSPHGL 275
>SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 548
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Frame = +3
Query: 429 EDDPDHVRNIQHARHVRRHP--------SRALAVRSGRTTGIVLDFRR-RCLPHRAHFTE 581
E P R IQH R P ++ L +++ T ++L+ + LP R H +
Sbjct: 228 ERKPLFPRLIQHVRFPLMSPYYLADFVETKELVLKTPECTPLLLEAKNYHMLPDRRHLIK 287
Query: 582 GYRTSPRHS 608
G RT PR S
Sbjct: 288 GSRTKPRKS 296
>SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 570
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Frame = +3
Query: 429 EDDPDHVRNIQHARHVRRHP--------SRALAVRSGRTTGIVLDFRR-RCLPHRAHFTE 581
E P R IQH R P ++ L +++ T ++L+ + LP R H +
Sbjct: 228 ERKPLFPRLIQHVRFPLMSPYYLADFVETKELVLKTPECTPLLLEAKNYHMLPDRRHLIK 287
Query: 582 GYRTSPRHS 608
G RT PR S
Sbjct: 288 GSRTKPRKS 296
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -1
Query: 251 PHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 81
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_24944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 235 RVLLSHTDHHALMAGPSHDRGKHCARSIISCEAGLAHTGAIVYY 104
R++ S T H + G H G H ++ EAGL I+ +
Sbjct: 37 RLVFSATIEHEYLGGRYHSIGAHISQETSRHEAGLTQISRIIRF 80
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 189 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 79
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30)
Length = 685
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Frame = -1
Query: 599 WGS--AVSLGKMGTV--WKTPSPEVQHDTGGTTGPYSESTAW-----MATYMA-GVLNVS 450
WG+ +SL G V W S +++H G Y S AW M Y+A G + +
Sbjct: 208 WGNNNLLSLALAGAVYIWNAESSDIKHLFQMDEGEYVSSVAWVQEHSMTQYLAVGTHDGN 267
Query: 449 NMIWVIFSLLALGLRGASVSRTGCSS 372
+W + + + G +R G S
Sbjct: 268 VQLWDVEASKCVRCMGGHAARVGSLS 293
>SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10)
Length = 1514
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = -1
Query: 557 KTPSPEVQHDTGGTTGPYSE---STAWMATYMAGVLNVSNMIWVIFSL 423
+T P V++ G PY + WM TY+A N SN + SL
Sbjct: 992 ETTVPLVRYKDGVWIRPYFDCFGGKIWMVTYLAPFYNASNQFLGVVSL 1039
>SB_18995| Best HMM Match : rve (HMM E-Value=0.0012)
Length = 1225
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 194 GAFPRSRETLREEHHLLRSRPCTYRS 117
G +P S++T R E + +RPCT S
Sbjct: 832 GCYPWSKQTFRHEGPPISARPCTAMS 857
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 521 HRYRAGLPATVSSTPCPFYRGIPHFPTPFWGFGPW 625
H Y +T+S Y G PH+ +G+GPW
Sbjct: 615 HAYHEPYASTISHAAT--YVGAPHYYPGGFGYGPW 647
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,867,578
Number of Sequences: 59808
Number of extensions: 643387
Number of successful extensions: 2232
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2205
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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