Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0057
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 208 3e-54
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 208 3e-54
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 208 3e-54
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 208 3e-54
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 208 3e-54
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 208 3e-54
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 208 3e-54
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 208 3e-54
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 208 3e-54
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 208 3e-54
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 200 7e-52
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 142 2e-34
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 131 5e-31
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 131 5e-31
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 130 1e-30
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 130 1e-30
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 111 5e-25
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 100 8e-22
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 74 1e-13
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 38 0.008
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.011
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.011
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 32 0.40
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 3.8
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 29 3.8
AF098995-12|AAC67485.1| 406|Caenorhabditis elegans Hypothetical... 28 5.0
AF125442-10|AAD12789.1| 84|Caenorhabditis elegans Nematode spe... 28 6.6
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.6
Z70286-2|CAA94290.1| 529|Caenorhabditis elegans Hypothetical pr... 27 8.7
AJ582071-1|CAE46541.1| 529|Caenorhabditis elegans flavin monoox... 27 8.7
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 8.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 8.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 8.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 8.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 208 bits (507), Expect = 3e-54
Identities = 104/128 (81%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY-EGYALPHAILRL 179
Query: 616 WTLGRS*T 639
GR T
Sbjct: 180 DLAGRDLT 187
Score = 131 bits (316), Expect = 5e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 208 bits (507), Expect = 3e-54
Identities = 104/128 (81%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY-EGYALPHAILRL 179
Query: 616 WTLGRS*T 639
GR T
Sbjct: 180 DLAGRDLT 187
Score = 130 bits (313), Expect = 1e-30
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 208 bits (507), Expect = 3e-54
Identities = 104/128 (81%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY-EGYALPHAILRL 179
Query: 616 WTLGRS*T 639
GR T
Sbjct: 180 DLAGRDLT 187
Score = 131 bits (316), Expect = 5e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 208 bits (507), Expect = 3e-54
Identities = 104/128 (81%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY-EGYALPHAILRL 179
Query: 616 WTLGRS*T 639
GR T
Sbjct: 180 DLAGRDLT 187
Score = 131 bits (316), Expect = 5e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 208 bits (507), Expect = 3e-54
Identities = 104/128 (81%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY-EGYALPHAILRL 179
Query: 616 WTLGRS*T 639
GR T
Sbjct: 180 DLAGRDLT 187
Score = 131 bits (316), Expect = 5e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 208 bits (507), Expect = 3e-54
Identities = 104/128 (81%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIY-EGYALPHAILRL 179
Query: 616 WTLGRS*T 639
GR T
Sbjct: 180 DLAGRDLT 187
Score = 128 bits (309), Expect = 3e-30
Identities = 56/62 (90%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 208 bits (507), Expect = 3e-54
Identities = 104/128 (81%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY-EGYALPHAILRL 179
Query: 616 WTLGRS*T 639
GR T
Sbjct: 180 DLAGRDLT 187
Score = 131 bits (316), Expect = 5e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 208 bits (507), Expect = 3e-54
Identities = 104/128 (81%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 17 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 76
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 77 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY-EGYALPHAILRL 135
Query: 616 WTLGRS*T 639
GR T
Sbjct: 136 DLAGRDLT 143
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2
Query: 209 MVGMGQKDSYVGDEARAK 262
MVGMGQKDSYVGDEA++K
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 208 bits (507), Expect = 3e-54
Identities = 104/128 (81%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 47 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 106
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 107 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY-EGYALPHAILRL 165
Query: 616 WTLGRS*T 639
GR T
Sbjct: 166 DLAGRDLT 173
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +2
Query: 131 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 208 bits (507), Expect = 3e-54
Identities = 104/128 (81%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIY-EGYALPHAILRL 179
Query: 616 WTLGRS*T 639
GR T
Sbjct: 180 DLAGRDLT 187
Score = 131 bits (316), Expect = 5e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 200 bits (488), Expect = 7e-52
Identities = 99/128 (77%), Positives = 102/128 (79%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKM 119
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYV IQAVLSLY +GDGV HTVPI ALPHAI
Sbjct: 120 TQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIY-EGYALPHAIQRL 178
Query: 616 WTLGRS*T 639
GR T
Sbjct: 179 DLAGRDLT 186
Score = 124 bits (300), Expect = 4e-29
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +2
Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 142 bits (344), Expect = 2e-34
Identities = 69/129 (53%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREK 432
S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+
Sbjct: 63 SNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRER 122
Query: 433 MTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILG 612
+I FETFN PA+Y+ +QAVLSLY SGDGV H VPI+ + A+ HAI
Sbjct: 123 SAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIV-KGFAMKHAIQR 181
Query: 613 FWTLGRS*T 639
GR T
Sbjct: 182 MDLAGRDVT 190
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARA 259
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A +
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 131 bits (316), Expect = 5e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKI 333
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 131 bits (316), Expect = 5e-31
Identities = 59/62 (95%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKI 333
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 130 bits (313), Expect = 1e-30
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKI 333
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 130 bits (313), Expect = 1e-30
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
Score = 54.8 bits (126), Expect = 5e-08
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDM 324
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 111 bits (266), Expect = 5e-25
Identities = 53/105 (50%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Frame = +1
Query: 262 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMT 438
R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM
Sbjct: 65 RQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMF 124
Query: 439 QIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPI 573
Q+MFE + ++YVA+QAVL+LY + SGDGV H P+
Sbjct: 125 QVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPV 169
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDE 250
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 100 bits (240), Expect = 8e-22
Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 8/108 (7%)
Frame = +1
Query: 274 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 453
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 454 TFNTPAMYVAIQAVLSL---YGPVVPPVSCWT-----SGDGVFHTVPI 573
+FN P +Y+A+QAVL+L + T SGDGV H +P+
Sbjct: 140 SFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPV 187
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 184
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 73.7 bits (173), Expect = 1e-13
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +1
Query: 289 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 468
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 469 AMYVAIQAVLSLY 507
A Y++ VLS +
Sbjct: 154 AYYLSKNVVLSCF 166
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 184
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 37.5 bits (83), Expect = 0.008
Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = -2
Query: 619 SKTPEWRGEVRYPSVKWARCGRHRRRKSSTIPVVRPDRTARARLGWR---RTW-RAC*MF 452
S+TP R R S R GRH R +S + P RP R +R+R R R W RA
Sbjct: 324 SRTPAQRHSRRSESTSRRRSGRHSRSRSRSPPRKRPVRRSRSRSRSRTPNRNWTRARSRT 383
Query: 451 RT*SGSSS-LCWP 416
R+ + SSS L WP
Sbjct: 384 RSQAKSSSTLTWP 396
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 286 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 459
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 286 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 459
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -1
Query: 338 CQIFSMSSQLVTIPC-SMGYLRVRIPLLLVPHLLHKSPSVP-YRPSRPD 198
CQ+FS QLVT+ SMG +++++ + +P L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +3
Query: 402 SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRSGRTTGIVLD-FRRRCLPHRAHFT 578
SP P + ++ + + +R R RA RSGRT+ D +R R+ +
Sbjct: 136 SPPPSENREKEKQSRDKERRRSRSPRDRRGRATTSRSGRTSSSDRDRHSKRRSRSRSRSS 195
Query: 579 EGYRTSPRHS 608
G RT P S
Sbjct: 196 SGSRTPPYKS 205
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = -1
Query: 572 MGTVWKTPSPEVQHDTGGTTGPYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 411
+G+ W T V TGGT GP + A+ + G + + S A+G
Sbjct: 554 LGSTWMTTPTPVTGGTGGTMGPMGSTGVTQASPVTGATGFTMPTGISQSTPAIG 607
>AF098995-12|AAC67485.1| 406|Caenorhabditis elegans Hypothetical
protein F58E1.12 protein.
Length = 406
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 447 VRNIQHARHVRRHPSRALAVRSGRTTGIVLD-FRRRCLPHRAHFTEGY-RTSP 599
+++ +R+ R ++ G L+ FRRR L ++ +F GY RT+P
Sbjct: 110 LKDQSECEQIRQEAERISGIQDGEEKDRALNRFRRRALIYQGNFLRGYARTNP 162
>AF125442-10|AAD12789.1| 84|Caenorhabditis elegans Nematode
specific peptide family,group b protein 6 protein.
Length = 84
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 473 CTSPSKPCSRCTVRSYHRYRAGLPATVSSTPCPFYRGIPHFPTPFWGFGPWAGRE 637
C S S+ V + Y P S+ P + G +PT F+G+G G++
Sbjct: 15 CISSSQVVYSPEVVASPYYYGAAPVAASAYPYAYAYGATAYPTAFYGWGSNKGQQ 69
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 131 KAGFAGDDAPRAVFPSIVGRPRHQG 205
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z70286-2|CAA94290.1| 529|Caenorhabditis elegans Hypothetical
protein K08C7.5 protein.
Length = 529
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 566 CPFYRGIPHFPTPFWGFGPWAGREPH 643
C + IPH+P PF G + GR H
Sbjct: 147 CSGHHAIPHWPKPFPGQNEFKGRIVH 172
>AJ582071-1|CAE46541.1| 529|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 529
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 566 CPFYRGIPHFPTPFWGFGPWAGREPH 643
C + IPH+P PF G + GR H
Sbjct: 147 CSGHHAIPHWPKPFPGQNEFKGRIVH 172
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 156 ASSPAKPALHIPEPLSTTNAATSS 85
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 156 ASSPAKPALHIPEPLSTTNAATSS 85
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 156 ASSPAKPALHIPEPLSTTNAATSS 85
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 156 ASSPAKPALHIPEPLSTTNAATSS 85
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,528,424
Number of Sequences: 27780
Number of extensions: 433095
Number of successful extensions: 1611
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1584
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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