Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0057
(647 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 206 1e-53
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 206 1e-53
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 206 1e-53
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 204 4e-53
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 203 7e-53
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 203 7e-53
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 202 1e-52
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 202 1e-52
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 202 1e-52
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 186 1e-47
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 175 2e-44
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 168 3e-42
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 120 8e-28
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 98 4e-21
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 81 8e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 66 1e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 58 7e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 3e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.094
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 1.9
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 29 2.0
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.5
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.5
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 4.7
At3g58120.1 68416.m06481 bZIP transcription factor family protei... 28 4.7
At5g26930.1 68418.m03211 zinc finger (GATA type) family protein ... 28 6.1
At3g26680.2 68416.m03336 DNA cross-link repair protein-related c... 28 6.1
At3g26680.1 68416.m03335 DNA cross-link repair protein-related c... 28 6.1
At3g06740.1 68416.m00799 zinc finger (GATA type) family protein 28 6.1
At2g01480.1 68415.m00071 expressed protein contains Pfam PF03138... 28 6.1
At5g53440.1 68418.m06641 expressed protein 27 8.1
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.1
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 206 bits (503), Expect = 1e-53
Identities = 103/128 (80%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 122 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY-EGYALPHAILRL 180
Query: 616 WTLGRS*T 639
GR T
Sbjct: 181 DLAGRDLT 188
Score = 107 bits (258), Expect = 5e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 206 bits (502), Expect = 1e-53
Identities = 103/128 (80%), Positives = 103/128 (80%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 122 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY-EGYALPHAILRL 180
Query: 616 WTLGRS*T 639
GR T
Sbjct: 181 DLAGRDLT 188
Score = 107 bits (258), Expect = 5e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 206 bits (502), Expect = 1e-53
Identities = 103/128 (80%), Positives = 103/128 (80%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFNTPAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 122 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY-EGYALPHAILRL 180
Query: 616 WTLGRS*T 639
GR T
Sbjct: 181 DLAGRDLT 188
Score = 107 bits (258), Expect = 5e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 204 bits (498), Expect = 4e-53
Identities = 102/128 (79%), Positives = 103/128 (80%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFN PAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 122 TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY-EGYALPHAILRL 180
Query: 616 WTLGRS*T 639
GR T
Sbjct: 181 DLAGRDLT 188
Score = 107 bits (258), Expect = 5e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 203 bits (496), Expect = 7e-53
Identities = 101/128 (78%), Positives = 102/128 (79%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFN PAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 122 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY-EGYALPHAILRL 180
Query: 616 WTLGRS*T 639
GR T
Sbjct: 181 DLAGRDLT 188
Score = 107 bits (258), Expect = 5e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 203 bits (496), Expect = 7e-53
Identities = 101/128 (78%), Positives = 102/128 (79%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFN PAMYVAIQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 122 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY-EGYALPHAILRL 180
Query: 616 WTLGRS*T 639
GR T
Sbjct: 181 DLAGRDLT 188
Score = 107 bits (258), Expect = 5e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 202 bits (494), Expect = 1e-52
Identities = 99/128 (77%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFN+PAMYVAIQAVLSLY SGDGV HTVPI +LPHAIL
Sbjct: 122 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY-EGFSLPHAILRL 180
Query: 616 WTLGRS*T 639
GR T
Sbjct: 181 DLAGRDLT 188
Score = 103 bits (247), Expect = 1e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 202 bits (494), Expect = 1e-52
Identities = 99/128 (77%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFN+PAMYVAIQAVLSLY SGDGV HTVPI +LPHAIL
Sbjct: 122 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY-EGFSLPHAILRL 180
Query: 616 WTLGRS*T 639
GR T
Sbjct: 181 DLAGRDLT 188
Score = 103 bits (247), Expect = 1e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 202 bits (494), Expect = 1e-52
Identities = 99/128 (77%), Positives = 104/128 (81%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETFN+PAMYVAIQAVLSLY SGDGV HTVPI +LPHAIL
Sbjct: 122 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY-EGFSLPHAILRL 180
Query: 616 WTLGRS*T 639
GR T
Sbjct: 181 DLAGRDLT 188
Score = 103 bits (247), Expect = 1e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 186 bits (452), Expect = 1e-47
Identities = 89/128 (69%), Positives = 99/128 (77%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKM
Sbjct: 63 ARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKM 122
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFE+F P+MY+ IQAVLSLY SGDGV HTVPI ALPHAIL
Sbjct: 123 TQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIY-EGYALPHAILRL 181
Query: 616 WTLGRS*T 639
GR T
Sbjct: 182 DLAGRDLT 189
Score = 102 bits (244), Expect = 2e-22
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEA+A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 175 bits (426), Expect = 2e-44
Identities = 84/129 (65%), Positives = 100/129 (77%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKM
Sbjct: 17 ARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKM 76
Query: 436 TQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGF 615
TQIMFETF P+MY+ +QA LSL+ + SGDGV + VPI +ALPHAIL
Sbjct: 77 TQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIY-EGSALPHAILRL 135
Query: 616 WTLGRS*TS 642
GR T+
Sbjct: 136 DLAGRHLTN 144
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 168 bits (408), Expect = 3e-42
Identities = 88/145 (60%), Positives = 99/145 (68%)
Frame = +1
Query: 205 RDGRYGTEGLLCRR*GTSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 384
RDG E + G + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 385 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHT 564
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY G+ V HT
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 565 VPILPRDTALPHAILGFWTLGRS*T 639
VP+ ALPH IL GR T
Sbjct: 154 VPVY-EGYALPHGILRLDLGGRDLT 177
Score = 60.9 bits (141), Expect = 7e-10
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARA 259
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 120 bits (289), Expect = 8e-28
Identities = 56/124 (45%), Positives = 76/124 (61%)
Frame = +1
Query: 271 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 450
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 451 ETFNTPAMYVAIQAVLSLYGPVVPPVSCWTSGDGVFHTVPILPRDTALPHAILGFWTLGR 630
E +N +++ IQAVL+LY + SGDGV H VP++ + PH GR
Sbjct: 126 EKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVD-GYSFPHLTKRMNVAGR 184
Query: 631 S*TS 642
T+
Sbjct: 185 HITA 188
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 247
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 98.3 bits (234), Expect = 4e-21
Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 5/104 (4%)
Frame = +1
Query: 277 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 456
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 457 FNTPAMYVAIQAVLSLYGPVVPPVSCWTS-----GDGVFHTVPI 573
FN P +Y+A+ +VL+L T GDG H VP+
Sbjct: 146 FNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPV 189
Score = 35.9 bits (79), Expect = 0.023
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 98 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 184
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 80.6 bits (190), Expect = 8e-16
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = +1
Query: 259 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 438
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 439 QIMFETFNTPAMYVAIQAVLSLY 507
++MFE + PA+++A VL+ +
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSF 167
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 187
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 66.5 bits (155), Expect = 1e-11
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 286 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 462
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 463 TPAMYVAIQAVLSLY 507
Y + QAVLSLY
Sbjct: 117 VSGFYASEQAVLSLY 131
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 98 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 190
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 259 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 432
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 187
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 57.6 bits (133), Expect = 7e-09
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Frame = +1
Query: 277 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 456
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 457 FNTPAMYVA-IQAVLSLYGPVVPPVSCWTS---------GDGVFHTVPILPRDTALPHAI 606
F ++Y+A Q+++ LY P S + G H VP+L T L HAI
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFT-LNHAI 179
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 193
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 286 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 462
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 463 TPAMYVAIQAVLS 501
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 247
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.094
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 222 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 85
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 1.9
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 198 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 112
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 1.9
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -3
Query: 387 DGVFLGGDTQLIVEGMMPNLLHVIPVS 307
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -1
Query: 566 TVWKTPSPEVQHDTGGTTGPYSESTAWMATYMAGVLNVSNMIWVIF 429
++WK +PE H P E TA + T+ + VS M W IF
Sbjct: 292 SIWKVHAPECYHIERSNVSPMVELTAIVQTHSSW---VSTMSWGIF 334
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 271 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 432
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 271 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 432
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 399 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 500
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At3g58120.1 68416.m06481 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription factor
;supported by cDNA gi|15100054|gb|AF401300.1|AF401300
Length = 329
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 634 TTGPRSKTPEWRGEVRYPSVKWARCGRHRRRKSSTIPVVRP 512
T GP+ + P W E + R G HRR S +I + P
Sbjct: 36 TAGPQQQNPSWMDE--FLDFSATRRGTHRRSISDSIAFLEP 74
>At5g26930.1 68418.m03211 zinc finger (GATA type) family protein
various predicted proteins, Arabidopsis thaliana
Length = 120
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 619 SKTPEWRGEVRYPSVKWARCG-RHRRRKSSTI 527
+KTP WRG P CG RHR+++ S +
Sbjct: 34 TKTPMWRGGPTGPKSLCNACGIRHRKQRRSEL 65
>At3g26680.2 68416.m03336 DNA cross-link repair protein-related
contains weak similarity to Swiss-Prot:P30620 DNA
cross-LINK repair protein PSO2/SNM1 [Saccharomyces
cerevisiae]
Length = 484
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 470 PCTSPSKPCSRCTVRSY-HRYRAGLPATVSSTPCPFYRGIPHFP 598
P TSP+ ++ T + R R + S PCPFY+ +P P
Sbjct: 112 PFTSPASNSAKKTTSALGKRRRDSSFSNDSPRPCPFYKKLPGTP 155
>At3g26680.1 68416.m03335 DNA cross-link repair protein-related
contains weak similarity to Swiss-Prot:P30620 DNA
cross-LINK repair protein PSO2/SNM1 [Saccharomyces
cerevisiae]
Length = 484
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 470 PCTSPSKPCSRCTVRSY-HRYRAGLPATVSSTPCPFYRGIPHFP 598
P TSP+ ++ T + R R + S PCPFY+ +P P
Sbjct: 112 PFTSPASNSAKKTTSALGKRRRDSSFSNDSPRPCPFYKKLPGTP 155
>At3g06740.1 68416.m00799 zinc finger (GATA type) family protein
Length = 149
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 619 SKTPEWRGEVRYPSVKWARCGRHRRRKSSTI 527
SKTP WRG P CG R+K T+
Sbjct: 49 SKTPLWRGGPAGPKSLCNACGIRNRKKRRTL 79
>At2g01480.1 68415.m00071 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as 'axi
1 protein from Nicotiana tabacum -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 567
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 565 RCGRHRRRKSSTIPVVRPDRTARARLGW 482
R GR + S P V+P RT RL W
Sbjct: 28 RHGRSKAAAGSRFPTVQPSRTLAHRLSW 55
>At5g53440.1 68418.m06641 expressed protein
Length = 1181
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 449 SKHSTRPPCTSPSKPCSRCTVRSYHRYRAGLPATVSSTPCPFYRGIPHFPTPFW-GFGPW 625
S+ P P + +R ++ R G+ A + +RG+P +P+P G+ P+
Sbjct: 603 SRSGVSSPRVGPREEDNRVNTGGRYK-RGGVDAMMGRGQSNMWRGVPSWPSPLSNGYFPF 661
Query: 626 AGREPH 643
PH
Sbjct: 662 QHVPPH 667
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 198 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 76
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,850,406
Number of Sequences: 28952
Number of extensions: 412303
Number of successful extensions: 1327
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1298
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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