Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0056
(558 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 26 0.96
DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domai... 25 1.3
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 2.9
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 24 2.9
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 5.1
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 23 6.8
AY063776-1|AAL59658.1| 224|Anopheles gambiae glutathione S-tran... 23 9.0
AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative 5-oxoprol... 23 9.0
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 23 9.0
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 23 9.0
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 25.8 bits (54), Expect = 0.96
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 69 ISSLSRPPIE-IS*KWGKITNREACCCKQVKTF-CLNQVSKRSARLQCNRR 215
+S + +P ++ I KWG I+ + CC K F + V +R L+ R+
Sbjct: 532 LSKVIKPRLDCIIGKWGIISTAQKCCNKPCNIFQAVLSVKERVVDLKMKRK 582
>DQ370045-1|ABD18606.1| 285|Anopheles gambiae putative TIL domain
protein protein.
Length = 285
Score = 25.4 bits (53), Expect = 1.3
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = +1
Query: 241 ASGRQHYTCFKRIYYNC-----EIGIVSIKFRSRWSYLTEPGCCDLRGFDADLRFSVALP 405
AS H C K Y+C + +S + + S L PGC +GF + +F +P
Sbjct: 18 ASRCVHRRCPKNEVYSCCAPCPQKACISEAVKCQTSCL--PGCVCKKGFVRETQFGNCVP 75
Query: 406 V--TQGP--SRCCRGSCATC 453
V T P ++C G + C
Sbjct: 76 VDTTYNPTTTKCAAGFTSGC 95
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 24.2 bits (50), Expect = 2.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 174 QVSKRSARLQCNRRAVACSRAQGE 245
QVS++ L N+RA+ C R +GE
Sbjct: 28 QVSEQHVLLVRNQRALNCYRLEGE 51
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 24.2 bits (50), Expect = 2.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 167 AKSFHLFTAASLTVRDFAPLLRYLDRWTRQ*AYPW 63
A +HL T + V++FA L++L Q A W
Sbjct: 511 AHDYHLHTGRNAMVKEFATKLKHLVHSRLQQANGW 545
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.4 bits (48), Expect = 5.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 174 QVSKRSARLQCNRRAVACSRAQGE 245
QVS + L N+RA+ C R +GE
Sbjct: 28 QVSAQHVLLVRNQRALNCYRLEGE 51
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.0 bits (47), Expect = 6.8
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -3
Query: 292 HSYNKFV*STYNVGGHSPCAREHATARRLHCSLADRFETWFKQKVFTCLQQQASR 128
+SY+ V Y VG P ++ TARR ++ W ++ L + A R
Sbjct: 200 YSYSDHVYIRYTVGEQPPREQQTGTARRQRTAVRLAGTRWNTRQFDPTLFESALR 254
>AY063776-1|AAL59658.1| 224|Anopheles gambiae glutathione
S-transferase E1 protein.
Length = 224
Score = 22.6 bits (46), Expect = 9.0
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 243 RPAHVSTRRPADCTAVSQTASKLGLSKKFSLV 148
+P + R C AV TA LGL + LV
Sbjct: 3 KPVLYTVRLSPPCRAVELTAKALGLELERKLV 34
>AJ441131-8|CAD29637.1| 756|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 756
Score = 22.6 bits (46), Expect = 9.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 167 LKPSFEAVCETAVQSAGRRVLTCAGRVAANIIRALNEFIITVKLE 301
L P+ EA C+ SAG R LT A + L+E + KLE
Sbjct: 138 LVPAQEASCQLGEASAGWRRLTGAADSTYLEMVPLDEQDLRSKLE 182
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
5-oxoprolinase protein.
Length = 1344
Score = 22.6 bits (46), Expect = 9.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 167 LKPSFEAVCETAVQSAGRRVLTCAGRVAANIIRALNEFIITVKLE 301
L P+ EA C+ SAG R LT A + L+E + KLE
Sbjct: 138 LVPAQEASCQLGEASAGWRRLTGAADSTYLEMVPLDEQDLRSKLE 182
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 22.6 bits (46), Expect = 9.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 167 AKSFHLFTAASLTVRDFAPLLRYLDRWTRQ*AYPW 63
A +HL + V++FA L++L Q A W
Sbjct: 511 ANDYHLHAGRNAMVKEFAAKLKHLVHSRLQQANGW 545
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,124
Number of Sequences: 2352
Number of extensions: 11799
Number of successful extensions: 27
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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