Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0056
(558 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL731544-3|CAI14998.1| 431|Homo sapiens novel SH2 domain-contai... 45 2e-04
AL731544-2|CAI14997.1| 357|Homo sapiens novel SH2 domain-contai... 45 2e-04
AL731544-1|CAI14996.1| 215|Homo sapiens novel SH2 domain-contai... 45 2e-04
AK123885-1|BAC85715.1| 357|Homo sapiens protein ( Homo sapiens ... 45 2e-04
BC082982-1|AAH82982.1| 454|Homo sapiens SH2D4A protein protein. 43 8e-04
AK024799-1|BAB15010.1| 454|Homo sapiens protein ( Homo sapiens ... 43 8e-04
X54131-1|CAA38066.1| 1997|Homo sapiens protein-tyrosine phosphat... 31 2.1
BX648771-1|CAE46198.1| 1956|Homo sapiens hypothetical protein pr... 31 2.1
BC113463-1|AAI13464.1| 1997|Homo sapiens protein tyrosine phosph... 31 2.1
BC101679-1|AAI01680.1| 1997|Homo sapiens protein tyrosine phosph... 31 2.1
BC051329-1|AAH51329.1| 771|Homo sapiens PTPRB protein protein. 31 2.1
AK128562-1|BAC87502.1| 1407|Homo sapiens protein ( Homo sapiens ... 31 2.1
AK126121-1|BAC86450.1| 609|Homo sapiens protein ( Homo sapiens ... 31 2.1
>AL731544-3|CAI14998.1| 431|Homo sapiens novel SH2
domain-containing protein protein.
Length = 431
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +3
Query: 426 MLQRILRDMWVDPEILAELDETQKQTLFVK 515
MLQ+IL DM++DPE+LAEL + QK LF K
Sbjct: 1 MLQQILHDMYIDPELLAELSDVQKHILFYK 30
>AL731544-2|CAI14997.1| 357|Homo sapiens novel SH2
domain-containing protein protein.
Length = 357
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +3
Query: 426 MLQRILRDMWVDPEILAELDETQKQTLFVK 515
MLQ+IL DM++DPE+LAEL + QK LF K
Sbjct: 1 MLQQILHDMYIDPELLAELSDVQKHILFYK 30
>AL731544-1|CAI14996.1| 215|Homo sapiens novel SH2
domain-containing protein protein.
Length = 215
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +3
Query: 426 MLQRILRDMWVDPEILAELDETQKQTLFVK 515
MLQ+IL DM++DPE+LAEL + QK LF K
Sbjct: 1 MLQQILHDMYIDPELLAELSDVQKHILFYK 30
>AK123885-1|BAC85715.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ41891 fis, clone OCBBF2025028. ).
Length = 357
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +3
Query: 426 MLQRILRDMWVDPEILAELDETQKQTLFVK 515
MLQ+IL DM++DPE+LAEL + QK LF K
Sbjct: 1 MLQQILHDMYIDPELLAELSDVQKHILFYK 30
>BC082982-1|AAH82982.1| 454|Homo sapiens SH2D4A protein protein.
Length = 454
Score = 42.7 bits (96), Expect = 8e-04
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +3
Query: 426 MLQRILRDMWVDPEILAELDETQKQTLFVK 515
ML++IL +M++DP++LAEL E QKQ LF K
Sbjct: 1 MLKQILSEMYIDPDLLAELSEEQKQILFFK 30
>AK024799-1|BAB15010.1| 454|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21146 fis, clone CAS09305. ).
Length = 454
Score = 42.7 bits (96), Expect = 8e-04
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +3
Query: 426 MLQRILRDMWVDPEILAELDETQKQTLFVK 515
ML++IL +M++DP++LAEL E QKQ LF K
Sbjct: 1 MLKQILSEMYIDPDLLAELSEEQKQILFFK 30
>X54131-1|CAA38066.1| 1997|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 1997
Score = 31.5 bits (68), Expect = 2.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 177 LGLSKKFSLVYSSKPHGS*FCPTFKISRS 91
LG FSL+YSS G+ CPTF+I +
Sbjct: 48 LGSPCNFSLIYSSDTLGAALCPTFRIDNT 76
>BX648771-1|CAE46198.1| 1956|Homo sapiens hypothetical protein
protein.
Length = 1956
Score = 31.5 bits (68), Expect = 2.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 177 LGLSKKFSLVYSSKPHGS*FCPTFKISRS 91
LG FSL+YSS G+ CPTF+I +
Sbjct: 7 LGSPCNFSLIYSSDTLGAALCPTFRIDNT 35
>BC113463-1|AAI13464.1| 1997|Homo sapiens protein tyrosine
phosphatase, receptor type, B protein.
Length = 1997
Score = 31.5 bits (68), Expect = 2.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 177 LGLSKKFSLVYSSKPHGS*FCPTFKISRS 91
LG FSL+YSS G+ CPTF+I +
Sbjct: 48 LGSPCNFSLIYSSDTLGAALCPTFRIDNT 76
>BC101679-1|AAI01680.1| 1997|Homo sapiens protein tyrosine
phosphatase, receptor type, B protein.
Length = 1997
Score = 31.5 bits (68), Expect = 2.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 177 LGLSKKFSLVYSSKPHGS*FCPTFKISRS 91
LG FSL+YSS G+ CPTF+I +
Sbjct: 48 LGSPCNFSLIYSSDTLGAALCPTFRIDNT 76
>BC051329-1|AAH51329.1| 771|Homo sapiens PTPRB protein protein.
Length = 771
Score = 31.5 bits (68), Expect = 2.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 177 LGLSKKFSLVYSSKPHGS*FCPTFKISRS 91
LG FSL+YSS G+ CPTF+I +
Sbjct: 266 LGSPCNFSLIYSSDTLGAALCPTFRIDNT 294
>AK128562-1|BAC87502.1| 1407|Homo sapiens protein ( Homo sapiens
cDNA FLJ46721 fis, clone TRACH3018524, highly similar
to Protein-tyrosine phosphatase beta precursor (EC
3.1.3.48). ).
Length = 1407
Score = 31.5 bits (68), Expect = 2.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 177 LGLSKKFSLVYSSKPHGS*FCPTFKISRS 91
LG FSL+YSS G+ CPTF+I +
Sbjct: 145 LGSPCNFSLIYSSDTLGAALCPTFRIDNT 173
>AK126121-1|BAC86450.1| 609|Homo sapiens protein ( Homo sapiens
cDNA FLJ44133 fis, clone THYMU2008725, highly similar
to PROTEIN-TYROSINE PHOSPHATASE BETA PRECURSOR (EC
3.1.3.48). ).
Length = 609
Score = 31.5 bits (68), Expect = 2.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 177 LGLSKKFSLVYSSKPHGS*FCPTFKISRS 91
LG FSL+YSS G+ CPTF+I +
Sbjct: 266 LGSPCNFSLIYSSDTLGAALCPTFRIDNT 294
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,507,653
Number of Sequences: 237096
Number of extensions: 1620745
Number of successful extensions: 4517
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4517
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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