Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0055
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 63 2e-10
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 62 3e-10
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 62 3e-10
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 58 7e-09
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 58 7e-09
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 58 7e-09
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 58 7e-09
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 57 1e-08
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 57 1e-08
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 57 1e-08
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 56 2e-08
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 53 1e-07
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 53 1e-07
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 53 2e-07
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 53 2e-07
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 53 2e-07
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 53 2e-07
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 53 2e-07
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 52 4e-07
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 52 4e-07
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 52 4e-07
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 51 8e-07
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 50 2e-06
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 50 2e-06
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 50 2e-06
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 48 5e-06
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 48 5e-06
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 48 5e-06
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 37 0.010
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 33 0.13
U40954-4|AAB52655.3| 157|Caenorhabditis elegans Hypothetical pr... 32 0.39
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 30 1.6
AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical ... 29 2.1
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 29 2.7
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 2.7
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 29 2.7
U40934-1|AAA81679.1| 511|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical ... 28 6.3
AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical ... 28 6.3
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 28 6.3
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 28 6.3
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 27 8.3
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 27 8.3
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/80 (38%), Positives = 48/80 (60%)
Frame = +2
Query: 272 KDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 451
K+KF+V LDVQ F+P+EI VK + +++ ++R+ R Y LP+
Sbjct: 31 KEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHGTVAREINRAYKLPDDVDVS 90
Query: 452 TVESRLSSDGVLTITAPRKS 511
TV+S L++ GVLTITA +K+
Sbjct: 91 TVKSHLATRGVLTITASKKA 110
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 62.1 bits (144), Expect = 3e-10
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +2
Query: 278 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 457
++ V++DV F PEE+ V D +++ + R FVR+Y LP G PE +
Sbjct: 56 EYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQI 115
Query: 458 ESRLSSDGVLTI 493
+S LS++GVLT+
Sbjct: 116 KSELSNNGVLTV 127
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 62.1 bits (144), Expect = 3e-10
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +2
Query: 278 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 457
++ V++DV F PEE+ V D +++ + R FVR+Y LP G PE +
Sbjct: 55 EYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQI 114
Query: 458 ESRLSSDGVLTI 493
+S LS++GVLT+
Sbjct: 115 KSELSNNGVLTV 126
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 57.6 bits (133), Expect = 7e-09
Identities = 30/75 (40%), Positives = 39/75 (52%)
Frame = +2
Query: 275 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 454
+KF+V LD F P +I VK I++ ++R+ R Y LPE P T
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEYGIVNREVHRTYKLPEDVDPST 91
Query: 455 VESRLSSDGVLTITA 499
V S L+S GVLTITA
Sbjct: 92 VRSHLNSSGVLTITA 106
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 57.6 bits (133), Expect = 7e-09
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +2
Query: 254 PSIKADKD--KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYA 427
P IK + D ++ DV ++ PEE++VKT D ++V + R++ + +
Sbjct: 17 PLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFL 75
Query: 428 LPEGAAPETVESRLSSDGVLTITAP 502
LP G PE + S LS+DGVLT+ AP
Sbjct: 76 LPRGTNPEQISSTLSTDGVLTVEAP 100
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 57.6 bits (133), Expect = 7e-09
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +2
Query: 254 PSIKADKD--KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYA 427
P IK + D ++ DV ++ PEE++VKT D ++V + R++ + +
Sbjct: 114 PLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFL 172
Query: 428 LPEGAAPETVESRLSSDGVLTITAP 502
LP G PE + S LS+DGVLT+ AP
Sbjct: 173 LPRGTNPEQISSTLSTDGVLTVEAP 197
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 57.6 bits (133), Expect = 7e-09
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +2
Query: 254 PSIKADKD--KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYA 427
P IK + D ++ DV ++ PEE++VKT D ++V + R++ + +
Sbjct: 128 PLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFL 186
Query: 428 LPEGAAPETVESRLSSDGVLTITAP 502
LP G PE + S LS+DGVLT+ AP
Sbjct: 187 LPRGTNPEQISSTLSTDGVLTVEAP 211
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/81 (37%), Positives = 43/81 (53%)
Frame = +2
Query: 269 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 448
D+ KF V LDV HF PE + +K DG + Y+ R F + LPE A
Sbjct: 4 DESKFSVQLDVSHFKPENLKIKL-DGRELKIEGIQETKSEHGYLKRSFSKMILLPEDADL 62
Query: 449 ETVESRLSSDGVLTITAPRKS 511
+V+S +S++G L I AP+K+
Sbjct: 63 PSVKSAISNEGKLQIEAPKKT 83
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/81 (37%), Positives = 43/81 (53%)
Frame = +2
Query: 269 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 448
D+ KF V LDV HF PE + +K DG + Y+ R F + LPE A
Sbjct: 51 DESKFSVQLDVSHFKPENLKIKL-DGRELKIEGIQETKSEHGYLKRSFSKMILLPEDADL 109
Query: 449 ETVESRLSSDGVLTITAPRKS 511
+V+S +S++G L I AP+K+
Sbjct: 110 PSVKSAISNEGKLQIEAPKKT 130
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/81 (37%), Positives = 43/81 (53%)
Frame = +2
Query: 269 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 448
D+ KF V LDV HF PE + +K DG + Y+ R F + LPE A
Sbjct: 50 DESKFSVQLDVSHFKPENLKIKL-DGRELKIEGIQETKSEHGYLKRSFSKMILLPEDADL 108
Query: 449 ETVESRLSSDGVLTITAPRKS 511
+V+S +S++G L I AP+K+
Sbjct: 109 PSVKSAISNEGKLQIEAPKKT 129
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/90 (32%), Positives = 44/90 (48%)
Frame = +2
Query: 257 SIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPE 436
SI+ F LDV + + + V D I+V I F RR+ LP+
Sbjct: 73 SIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLPK 132
Query: 437 GAAPETVESRLSSDGVLTITAPRKSRRRQG 526
APE+V+S+L++DG LTI A +++G
Sbjct: 133 AVAPESVQSQLTADGHLTIDAKAPEPKQEG 162
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/79 (31%), Positives = 40/79 (50%)
Frame = +2
Query: 272 KDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 451
+D F+V L+ +F P EI VK ++ + I+R R Y LP+G P
Sbjct: 30 EDHFEVGLEAHNFLPNEIDVKNIGEFLEIHMAHTTKDDKFGSITRSITRCYRLPKGTDPA 89
Query: 452 TVESRLSSDGVLTITAPRK 508
T++S+L G+L I+ +K
Sbjct: 90 TIKSKLDGSGILHISGNKK 108
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = +2
Query: 281 FQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVE 460
F + +DV HF PEEI V D + + + R F R+Y++P+ +T+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIR 163
Query: 461 SRLSSDGVLTITAPRKSRR 517
S L++ GVL I RK R
Sbjct: 164 SHLTNSGVLIINGSRKGWR 182
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = +2
Query: 281 FQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVE 460
F + +DV HF PEEI V D + + + R F R+Y++P+ +T+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIR 163
Query: 461 SRLSSDGVLTITAPRKSRR 517
S L++ GVL I RK R
Sbjct: 164 SHLTNSGVLIINGSRKGWR 182
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +2
Query: 269 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 448
D+ KF V LDV HF PE++ ++ DG + Y R F + LPE
Sbjct: 42 DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSKMILLPEDVDL 100
Query: 449 ETVESRLSSDGVLTITAPRKS 511
+V+S +S++G L I AP+K+
Sbjct: 101 TSVKSAISNEGKLQIEAPKKT 121
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +2
Query: 269 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 448
D+ KF V LDV HF PE++ ++ DG + Y R F + LPE
Sbjct: 50 DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSKMILLPEDVDL 108
Query: 449 ETVESRLSSDGVLTITAPRKS 511
+V+S +S++G L I AP+K+
Sbjct: 109 TSVKSAISNEGKLQIEAPKKT 129
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +2
Query: 269 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 448
D+ KF V LDV HF PE++ ++ DG + Y R F + LPE
Sbjct: 50 DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSKMILLPEDVDL 108
Query: 449 ETVESRLSSDGVLTITAPRKS 511
+V+S +S++G L I AP+K+
Sbjct: 109 TSVKSAISNEGKLQIEAPKKT 129
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +2
Query: 269 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 448
D+ KF V LDV HF PE++ ++ DG + Y R F + LPE
Sbjct: 51 DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSKMILLPEDVDL 109
Query: 449 ETVESRLSSDGVLTITAPRKS 511
+V+S +S++G L I AP+K+
Sbjct: 110 TSVKSAISNEGKLQIEAPKKT 130
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/81 (34%), Positives = 42/81 (51%)
Frame = +2
Query: 269 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 448
D+ KF V LDV HF PE++ ++ DG + Y R F + LPE
Sbjct: 50 DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSKMILLPEDVDL 108
Query: 449 ETVESRLSSDGVLTITAPRKS 511
+V+S +S++G L I AP+K+
Sbjct: 109 TSVKSAISNEGKLQIEAPKKT 129
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 51.6 bits (118), Expect = 4e-07
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +2
Query: 275 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXX---YISRQFVRRYALPEGAA 445
+KF+V LD F P +I VK I++ ++R+ R Y LPE
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKLPEDVD 91
Query: 446 PETVESRLSSDGVLTITA 499
P TV S L+S GVLTITA
Sbjct: 92 PSTVRSHLNSSGVLTITA 109
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 51.6 bits (118), Expect = 4e-07
Identities = 35/106 (33%), Positives = 46/106 (43%)
Frame = +2
Query: 212 QTVETTRGCIS*PRPSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXX 391
Q RG S I + KF +NL+V F PE++ + DG+ +
Sbjct: 28 QFTPVCRGSPSESSEQIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEH 86
Query: 392 XYISRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKSRRRQGR 529
Y + F R LPE V S LS DG L+I AP+K QGR
Sbjct: 87 GYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKK-EAIQGR 131
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 51.6 bits (118), Expect = 4e-07
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +2
Query: 275 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXX---YISRQFVRRYALPEGAA 445
+KF+V LD F P +I VK I++ ++R+ R Y LPE
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKLPEDVD 91
Query: 446 PETVESRLSSDGVLTITA 499
P TV S L+S GVLTITA
Sbjct: 92 PSTVRSHLNSSGVLTITA 109
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 50.8 bits (116), Expect = 8e-07
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 269 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 448
D +F V++D F PEEI VKT D +++ + FVR+Y LP
Sbjct: 110 DDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKYQLPRDVDF 169
Query: 449 ETVESRLSSDGVLTITAPR-KSRRRQGREK 535
+++S + + G L + A + + QGRE+
Sbjct: 170 NSIQSSIDAKGRLQVEAGKFNNMALQGRER 199
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/84 (35%), Positives = 40/84 (47%)
Frame = +2
Query: 278 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 457
KF +NL+V F PE++ + DG+ + Y + F R LPE V
Sbjct: 49 KFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLPEDVDVGAV 107
Query: 458 ESRLSSDGVLTITAPRKSRRRQGR 529
S LS DG L+I AP+K QGR
Sbjct: 108 ASNLSEDGKLSIEAPKK-EAIQGR 130
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/84 (35%), Positives = 40/84 (47%)
Frame = +2
Query: 278 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 457
KF +NL+V F PE++ + DG+ + Y + F R LPE V
Sbjct: 49 KFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLPEDVDVGAV 107
Query: 458 ESRLSSDGVLTITAPRKSRRRQGR 529
S LS DG L+I AP+K QGR
Sbjct: 108 ASNLSEDGKLSIEAPKK-EAIQGR 130
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/84 (35%), Positives = 40/84 (47%)
Frame = +2
Query: 278 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 457
KF +NL+V F PE++ + DG+ + Y + F R LPE V
Sbjct: 49 KFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLPEDVDVGAV 107
Query: 458 ESRLSSDGVLTITAPRKSRRRQGR 529
S LS DG L+I AP+K QGR
Sbjct: 108 ASNLSEDGKLSIEAPKK-EAIQGR 130
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 48.0 bits (109), Expect = 5e-06
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 269 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 448
D D F+V L+ +F P+EI VK + + +SR R Y LP+
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDM 89
Query: 449 ETVESRLSSDGVLTITA 499
+T++S L S G+L I A
Sbjct: 90 KTIKSNLDSHGILHIEA 106
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 48.0 bits (109), Expect = 5e-06
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 269 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 448
D D F+V L+ +F P+EI VK + + +SR R Y LP+
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDM 89
Query: 449 ETVESRLSSDGVLTITA 499
+T++S L S G+L I A
Sbjct: 90 KTIKSNLDSHGILHIEA 106
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 48.0 bits (109), Expect = 5e-06
Identities = 30/84 (35%), Positives = 39/84 (46%)
Frame = +2
Query: 278 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 457
KF +NL+V F PE++ + DG + Y + F R LPE V
Sbjct: 49 KFAINLNVSQFKPEDLKINL-DGRTLSIQGEQELKTDHGYSKKSFSRVILLPEDVDVGAV 107
Query: 458 ESRLSSDGVLTITAPRKSRRRQGR 529
S LS DG L+I AP+K QGR
Sbjct: 108 ASNLSEDGKLSIEAPKK-EAVQGR 130
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 48.0 bits (109), Expect = 5e-06
Identities = 30/84 (35%), Positives = 39/84 (46%)
Frame = +2
Query: 278 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 457
KF +NL+V F PE++ + DG + Y + F R LPE V
Sbjct: 49 KFAINLNVSQFKPEDLKINL-DGRTLSIQGEQELKTDHGYSKKSFSRVILLPEDVDVGAV 107
Query: 458 ESRLSSDGVLTITAPRKSRRRQGR 529
S LS DG L+I AP+K QGR
Sbjct: 108 ASNLSEDGKLSIEAPKK-EAVQGR 130
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 44.0 bits (99), Expect = 9e-05
Identities = 28/82 (34%), Positives = 38/82 (46%)
Frame = +2
Query: 260 IKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEG 439
I DKF VNL+V +F PEE+ V +G + + F R LPE
Sbjct: 45 IMNSNDKFAVNLNVSNFKPEELKV-NLEGRQLSIQGEHDVENEHGASRKSFSRMILLPED 103
Query: 440 AAPETVESRLSSDGVLTITAPR 505
+V + LS+DG L I AP+
Sbjct: 104 VDITSVATNLSNDGKLCIEAPK 125
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +2
Query: 278 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 457
KF V LDV F PEE+ V +G+++ + R F R++ LP+ +
Sbjct: 52 KFCVKLDVAAFKPEELKVNL-EGHVLTIEGHHEVKTEHGFSKRSFTRQFTLPKDVDLAHI 110
Query: 458 ESRLSSDGVLTITAPR 505
+ ++ +G +TI AP+
Sbjct: 111 HTVINKEGQMTIDAPK 126
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/90 (24%), Positives = 36/90 (40%)
Frame = +2
Query: 251 RPSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYAL 430
R I +KF VNL+V PEE+ + + + ++ + + L
Sbjct: 41 RNEIVDTHEKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSIVL 100
Query: 431 PEGAAPETVESRLSSDGVLTITAPRKSRRR 520
PE + S LS DG L I P+ ++
Sbjct: 101 PEDVDVTHLSSNLSEDGKLLIEVPKVEAKK 130
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 413 VRRYALPEGAAPETV-ESRLSSDGVLTITAPRKSRRRQGREKGAHRTDRSRSQGDQGPER 589
VRR+ PE + + V S SS G + + SRR + E+ HR R ++ PE+
Sbjct: 73 VRRHRSPEKESKDAVVTSTGSSRGATSASVTSSSRRHESGER--HRETHRREDKEKKPEK 130
Query: 590 GEPKDAE 610
+DA+
Sbjct: 131 STDRDAD 137
>U40954-4|AAB52655.3| 157|Caenorhabditis elegans Hypothetical
protein ZK813.3 protein.
Length = 157
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +2
Query: 443 APETVESRLSSDGVLTI----TAPRKSRRRQGREKGAHRTDRSRSQ 568
AP+T SRL G + PRK RRR+ R + HR RS S+
Sbjct: 41 APQTYGSRLPHPGYNRVYDEFDVPRKHRRRRHRGRRHHRNSRSNSR 86
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 269 DKDKFQVNLDVQHFSPEE 322
D+ KF V LDV HF PE+
Sbjct: 5 DESKFSVQLDVSHFKPED 22
>AF016683-5|AAB66196.2| 1010|Caenorhabditis elegans Hypothetical
protein K09F6.6 protein.
Length = 1010
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 431 PEGAAPETVESRLSSDGVLTITAPRKSRRRQGREK 535
PE P ++ + +GV T PR +RRR G+ K
Sbjct: 590 PEDFPPYEIDDDMMENGVDATTTPRITRRRAGQNK 624
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 486 SPSPRRGSPDAVKGERKVPIAQTGPVRKEIKDQSEGNPR 602
SP RRGSP A G+R+ PVR E + + E R
Sbjct: 234 SPPRRRGSPPARGGDRRDRREDRRPVRDEKEREEESRRR 272
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 489 PSPRRGSPDAVKGERKVPIAQTGPVRKEIK 578
PSP++ +P A K + K+P PV+ +K
Sbjct: 1023 PSPKKAAPVAAKPDPKIPEVPPTPVKNPVK 1052
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 564 ERDRSVRWAPFSLP*RRRDFLGAVMVRTPSDDSRD-STVSG 445
+ +RS W +P RRR + MV++P DD+ D +TV G
Sbjct: 3264 QTERSNGWTGHVMP-RRRGHINRSMVKSPDDDTYDVATVYG 3303
>U40934-1|AAA81679.1| 511|Caenorhabditis elegans Hypothetical
protein F35H10.7 protein.
Length = 511
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 138 LDQQDDWASGCDERGASHPTRMVEETSLVV 49
L+++D WA +E HP +TS +V
Sbjct: 167 LEREDKWADNAEEPNKDHPLEEFAKTSFIV 196
>AF101309-5|ABD94097.1| 543|Caenorhabditis elegans Hypothetical
protein H24G06.1e protein.
Length = 543
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Frame = +3
Query: 375 RRKTSTGIFQGSSSDVTRCLKARRLRLWNRGCHQTGFSPSPRRGSPDAVKGERKVPIAQT 554
R +TS +S + + R L NR + FSP+ RGS G PI
Sbjct: 315 RNQTSEESDSNNSDMMPLSINKRALTAGNRSTTGSDFSPASSRGSSSLAMGSG--PIGSG 372
Query: 555 GPVRKEIKDQ------SEGNPR 602
P + + DQ S G PR
Sbjct: 373 LPSSRRLYDQQRSVLSSSGTPR 394
>AF101309-4|AAV58863.1| 669|Caenorhabditis elegans Hypothetical
protein H24G06.1d protein.
Length = 669
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Frame = +3
Query: 375 RRKTSTGIFQGSSSDVTRCLKARRLRLWNRGCHQTGFSPSPRRGSPDAVKGERKVPIAQT 554
R +TS +S + + R L NR + FSP+ RGS G PI
Sbjct: 441 RNQTSEESDSNNSDMMPLSINKRALTAGNRSTTGSDFSPASSRGSSSLAMGSG--PIGSG 498
Query: 555 GPVRKEIKDQ------SEGNPR 602
P + + DQ S G PR
Sbjct: 499 LPSSRRLYDQQRSVLSSSGTPR 520
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Frame = +3
Query: 375 RRKTSTGIFQGSSSDVTRCLKARRLRLWNRGCHQTGFSPSPRRGSPDAVKGERKVPIAQT 554
R +TS +S + + R L NR + FSP+ RGS G PI
Sbjct: 1373 RNQTSEESDSNNSDMMPLSINKRALTAGNRSTTGSDFSPASSRGSSSLAMGSG--PIGSG 1430
Query: 555 GPVRKEIKDQ------SEGNPR 602
P + + DQ S G PR
Sbjct: 1431 LPSSRRLYDQQRSVLSSSGTPR 1452
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Frame = +3
Query: 375 RRKTSTGIFQGSSSDVTRCLKARRLRLWNRGCHQTGFSPSPRRGSPDAVKGERKVPIAQT 554
R +TS +S + + R L NR + FSP+ RGS G PI
Sbjct: 1452 RNQTSEESDSNNSDMMPLSINKRALTAGNRSTTGSDFSPASSRGSSSLAMGSG--PIGSG 1509
Query: 555 GPVRKEIKDQ------SEGNPR 602
P + + DQ S G PR
Sbjct: 1510 LPSSRRLYDQQRSVLSSSGTPR 1531
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 498 RRGSPDAVKGERKVPIAQTGPVRKEIK-DQSEGNPRMPKISRV 623
++GS A++ + + P T RK+ K D+ E +PK SR+
Sbjct: 1375 KKGSRKAIEFDLEEPSKSTSSSRKDRKDDRKEKKEELPKASRI 1417
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +1
Query: 475 RRGSHHHRAEEVPTPSRERERCPSHRPVPFARRSRTRAR 591
R S R +PSRER R S RRSRTR+R
Sbjct: 69 RSRSKDRRTTRRRSPSRERRRSRSRDRGAPRRRSRTRSR 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,673,256
Number of Sequences: 27780
Number of extensions: 308481
Number of successful extensions: 1145
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -