Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0049
         (555 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122270-1|AAM52782.1|  257|Drosophila melanogaster SD27025p pro...    28   7.4  
AE014298-776|AAF46063.1|  257|Drosophila melanogaster CG12410-PA...    28   7.4  
AB210899-1|BAD95485.1|  257|Drosophila melanogaster crossveinles...    28   7.4  

>AY122270-1|AAM52782.1|  257|Drosophila melanogaster SD27025p
           protein.
          Length = 257

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 454 YLEHATSLNSDNTLQTHNNIINVNCTLV 537
           Y       N D  +Q  +NI+ VNCT++
Sbjct: 142 YFLRTNDKNLDEAIQERDNIVTVNCTVI 169


>AE014298-776|AAF46063.1|  257|Drosophila melanogaster CG12410-PA
           protein.
          Length = 257

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 454 YLEHATSLNSDNTLQTHNNIINVNCTLV 537
           Y       N D  +Q  +NI+ VNCT++
Sbjct: 142 YFLRTNDKNLDEAIQERDNIVTVNCTVI 169


>AB210899-1|BAD95485.1|  257|Drosophila melanogaster crossveinless
           protein.
          Length = 257

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 454 YLEHATSLNSDNTLQTHNNIINVNCTLV 537
           Y       N D  +Q  +NI+ VNCT++
Sbjct: 142 YFLRTNDKNLDEAIQERDNIVTVNCTVI 169


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,925,391
Number of Sequences: 53049
Number of extensions: 280396
Number of successful extensions: 343
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)