Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0039
(616 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 4e-48
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 4e-48
SB_56| Best HMM Match : Actin (HMM E-Value=0) 188 4e-48
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 188 4e-48
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 188 4e-48
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 4e-24
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 2e-23
SB_54| Best HMM Match : Actin (HMM E-Value=0) 85 4e-17
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 65 5e-11
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 6e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 54 1e-07
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 6e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 35 0.046
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 35 0.060
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.56
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.56
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.74
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 0.74
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.74
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.98
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 29 3.0
SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0) 29 3.0
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 3.0
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 3.0
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 29 3.0
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 3.0
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 3.0
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.0
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 28 5.2
SB_23472| Best HMM Match : HIT (HMM E-Value=0.43) 28 5.2
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028) 28 5.2
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 28 5.2
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 28 5.2
SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0) 28 5.2
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 28 6.9
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 27 9.1
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 27 9.1
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 27 9.1
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 27 9.1
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 27 9.1
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 188 bits (457), Expect = 4e-48
Identities = 92/119 (77%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFN+PAMYVAIQA SGD G+ H PI
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD-GVTHTVPI 166
Score = 109 bits (263), Expect = 1e-24
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 188 bits (457), Expect = 4e-48
Identities = 92/119 (77%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFN+PAMYVAIQA SGD G+ H PI
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD-GVTHTVPI 165
Score = 107 bits (256), Expect = 9e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 100 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 188 bits (457), Expect = 4e-48
Identities = 92/119 (77%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFN+PAMYVAIQA SGD G+ H PI
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD-GVTHTVPI 165
Score = 108 bits (259), Expect = 4e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +1
Query: 100 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 188 bits (457), Expect = 4e-48
Identities = 92/119 (77%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFN+PAMYVAIQA SGD G+ H PI
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD-GVTHTVPI 166
Score = 114 bits (274), Expect = 6e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 188 bits (457), Expect = 4e-48
Identities = 92/119 (77%), Positives = 95/119 (79%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
APLNPKANREKMTQIMFETFN+PAMYVAIQA SGD G+ H PI
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD-GVSHTVPI 166
Score = 109 bits (263), Expect = 1e-24
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = +1
Query: 94 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 108 bits (259), Expect = 4e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +1
Query: 100 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +3
Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 365
G + VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/52 (48%), Positives = 29/52 (55%)
Frame = +3
Query: 438 NREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
N + M +IMFETFN+PAMYVAIQA SGD G+ H PI
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD-GVTHTVPI 128
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 105 bits (253), Expect = 2e-23
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
Frame = +3
Query: 216 SGRDGRYGTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 392
S + G + L+VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 393 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGG 572
VLLTE PLNP NREKM ++MFE + +Y+AIQA + SGD G
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGD-G 162
Query: 573 LPHPCPILRKGF 608
+ H CP+ +GF
Sbjct: 163 VTHICPVY-EGF 173
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 112 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 210
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 85.0 bits (201), Expect = 4e-17
Identities = 42/83 (50%), Positives = 54/83 (65%)
Frame = +3
Query: 345 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQACSRCT 524
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QA
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 525 RPVVPPVSCWTSGDGGLPHPCPI 593
+ + GD G+ H P+
Sbjct: 2189 ASGRTTGTVFDCGD-GVSHTVPV 2210
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 219
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 64.9 bits (151), Expect = 5e-11
Identities = 25/39 (64%), Positives = 34/39 (87%)
Frame = +3
Query: 393 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 509
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QA
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQA 164
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/17 (82%), Positives = 17/17 (100%)
Frame = +2
Query: 506 SVLSLYASGRTTGIVLD 556
+VLSLYA+GRTTG+VLD
Sbjct: 164 AVLSLYATGRTTGVVLD 180
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 6e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +3
Query: 303 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 482
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 483 PAMYV 497
PA ++
Sbjct: 63 PAFFL 67
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 219
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 219 GRDGRYGTEGL--LVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 392
GR + G E L +GDEA K T K+PI H IV +WD ME+ W + LR PE
Sbjct: 273 GRSAK-GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPE 330
Query: 393 EHPVLL 410
+H LL
Sbjct: 331 DHYFLL 336
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 88 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 234
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 216 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 100
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +3
Query: 219 GRDGRYGTEGLLVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 389
GR G + GL VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 390 EEHPVLLTEAPLNPKANRE 446
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 35.1 bits (77), Expect = 0.046
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +3
Query: 459 IMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593
IMFE FN+PA+YVAIQA + SGD G+ H PI
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGD-GVSHNVPI 44
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 34.7 bits (76), Expect = 0.060
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 249 LLVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 374
L +GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 272 LFIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 106 EVAALVVDNGSGMCKAGFAGDDAPRAV 186
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0)
Length = 192
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -2
Query: 561 RKSSTIPVVRPDAYSESTLGW 499
R++ T+P +RPDA S+ T+ W
Sbjct: 48 RRNGTLPWLRPDAKSQVTINW 68
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 148
H++ + ++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 28.3 bits (60), Expect = 5.2
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -1
Query: 397 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASS--PTKSPSVPYRPS 224
CS + + C + ++V CS + V + ++C+ P + PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 223 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 131
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_23472| Best HMM Match : HIT (HMM E-Value=0.43)
Length = 168
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 44 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 80
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 252
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 89 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 125
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 191 GNTARGASSPAKPALHIPEPLSTT 120
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 419 SPQPQGQQREDDPDHVRNIQHARHVRRHPS 508
SP P+ R D+P V A HV HPS
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPS 294
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 673 HIIFHDIMNHIDTHNILV-----KFQHGFRRFFSCETQLITT 709
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 292 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 328
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 503 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 539
>SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 979
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 139
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 129 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 165
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 316 PCSMGYLRVRIPLLLCASSPTKSPSVPY 233
P ++ +L PLL+ +SP SP++P+
Sbjct: 16 PPTIPFLAATTPLLMVTTSPLTSPTIPF 43
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 316 PCSMGYLRVRIPLLLCASSPTKSPSVPY 233
P ++ +L PLL+ +SP SP++P+
Sbjct: 82 PPTIPFLATTTPLLMVTTSPLPSPTIPF 109
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 112
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 111 NFFVAHLE 88
V L+
Sbjct: 152 QVDVLLLD 159
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 112
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 111 NFFVAHLE 88
V L+
Sbjct: 152 QVDVLLLD 159
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 206 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 96
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 112
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 184
Query: 111 NFFVAHLE 88
V L+
Sbjct: 185 QVDVLLLD 192
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 112
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 43 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 101
Query: 111 NFFVAHLE 88
V L+
Sbjct: 102 QVDVLLLD 109
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 112
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 773
Query: 111 NFFVAHLE 88
V L+
Sbjct: 774 QVDVLLLD 781
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -2
Query: 282 LFCSVPHLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 112
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 857
Query: 111 NFFVAHLE 88
V L+
Sbjct: 858 QVDVLLLD 865
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,948,627
Number of Sequences: 59808
Number of extensions: 562782
Number of successful extensions: 1905
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1891
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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