BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0039 (616 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 188 3e-48 At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 187 4e-48 At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 187 4e-48 At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 186 1e-47 At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 185 2e-47 At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 185 2e-47 At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 184 3e-47 At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 184 3e-47 At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 184 3e-47 At2g42100.1 68415.m05205 actin, putative very strong similarity ... 166 1e-41 At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 160 8e-40 At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 154 4e-38 At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 105 3e-23 At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 93 1e-19 At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 83 1e-16 At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 66 2e-11 At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 57 8e-09 At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 55 4e-08 At3g12380.1 68416.m01543 actin/actin-like family protein similar... 47 9e-06 At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.086 At1g16690.2 68414.m01999 transcription factor-related similar to... 31 0.80 At1g16690.1 68414.m01998 transcription factor-related similar to... 31 0.80 At1g31850.3 68414.m03915 dehydration-responsive protein, putativ... 29 2.4 At1g31850.2 68414.m03914 dehydration-responsive protein, putativ... 29 2.4 At1g31850.1 68414.m03913 dehydration-responsive protein, putativ... 29 2.4 At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 29 3.2 At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 4.3 At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 28 5.7 At2g41830.1 68415.m05169 cyclin-related contains Pfam profile PF... 28 5.7 At1g28320.1 68414.m03475 protease-related similar to Protease de... 28 5.7 At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.5 At1g02110.1 68414.m00137 proline-rich family protein contains pr... 27 7.5 At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 9.9 At3g12970.1 68416.m01616 expressed protein 27 9.9 At2g43180.4 68415.m05365 expressed protein 27 9.9 At2g43180.3 68415.m05363 expressed protein 27 9.9 At2g43180.2 68415.m05364 expressed protein 27 9.9 At2g43180.1 68415.m05362 expressed protein 27 9.9 At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 9.9 At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 27 9.9 At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 27 9.9 At1g17540.1 68414.m02157 protein kinase-related similar to serin... 27 9.9 >At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496 Actin 11 {Arabidopsis thaliana} Length = 377 Score = 188 bits (457), Expect = 3e-48 Identities = 92/119 (77%), Positives = 95/119 (79%) Frame = +3 Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416 G + VGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109 Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593 APLNPKANREKMTQIMFETFNTPAMYVAIQA SGD G+ H PI Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD-GVSHTVPI 167 Score = 92.3 bits (219), Expect = 2e-19 Identities = 41/50 (82%), Positives = 45/50 (90%) Frame = +1 Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+ Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54 >At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 Actin 4 {Arabidopsis thaliana} Length = 377 Score = 187 bits (456), Expect = 4e-48 Identities = 92/119 (77%), Positives = 94/119 (78%) Frame = +3 Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416 G + VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109 Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593 APLNPKANREKMTQIMFETFNTPAMYVAIQA SGD G+ H PI Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD-GVSHTVPI 167 Score = 92.3 bits (219), Expect = 2e-19 Identities = 41/50 (82%), Positives = 45/50 (90%) Frame = +1 Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+ Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54 >At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497 Actin 12 {Arabidopsis thaliana} Length = 377 Score = 187 bits (456), Expect = 4e-48 Identities = 92/119 (77%), Positives = 94/119 (78%) Frame = +3 Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416 G + VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109 Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593 APLNPKANREKMTQIMFETFNTPAMYVAIQA SGD G+ H PI Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD-GVSHTVPI 167 Score = 92.3 bits (219), Expect = 2e-19 Identities = 41/50 (82%), Positives = 45/50 (90%) Frame = +1 Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+ Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54 >At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana} Length = 377 Score = 186 bits (452), Expect = 1e-47 Identities = 91/119 (76%), Positives = 94/119 (78%) Frame = +3 Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416 G + VGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109 Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593 APLNPKANREKMTQIMFETFN PAMYVAIQA SGD G+ H PI Sbjct: 110 APLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGD-GVSHTVPI 167 Score = 92.3 bits (219), Expect = 2e-19 Identities = 41/50 (82%), Positives = 45/50 (90%) Frame = +1 Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+ Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54 >At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 Actin 3 {Arabidopsis thaliana}; supported by full-length cDNA: Ceres: 19581. Length = 377 Score = 185 bits (450), Expect = 2e-47 Identities = 90/119 (75%), Positives = 93/119 (78%) Frame = +3 Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416 G + VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109 Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593 APLNPKANREKMTQIMFETFN PAMYVAIQA SGD G+ H PI Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD-GVSHTVPI 167 Score = 92.3 bits (219), Expect = 2e-19 Identities = 41/50 (82%), Positives = 45/50 (90%) Frame = +1 Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+ Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54 >At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 Actin 1 (Actin 3) {Arabidopsis thaliana} Length = 377 Score = 185 bits (450), Expect = 2e-47 Identities = 90/119 (75%), Positives = 93/119 (78%) Frame = +3 Query: 237 GTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 416 G + VGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109 Query: 417 APLNPKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593 APLNPKANREKMTQIMFETFN PAMYVAIQA SGD G+ H PI Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD-GVSHTVPI 167 Score = 92.3 bits (219), Expect = 2e-19 Identities = 41/50 (82%), Positives = 45/50 (90%) Frame = +1 Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+ Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54 >At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 Length = 377 Score = 184 bits (449), Expect = 3e-47 Identities = 90/118 (76%), Positives = 96/118 (81%) Frame = +3 Query: 255 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 434 VGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK Sbjct: 56 VGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 115 Query: 435 ANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPILRKGF 608 ANREKMTQIMFETFN+PAMYVAIQA SGD G+ H PI +GF Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD-GVSHTVPIY-EGF 171 Score = 87.8 bits (208), Expect = 5e-18 Identities = 37/50 (74%), Positives = 44/50 (88%) Frame = +1 Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252 +++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+ Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54 >At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 Length = 371 Score = 184 bits (449), Expect = 3e-47 Identities = 90/118 (76%), Positives = 96/118 (81%) Frame = +3 Query: 255 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 434 VGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK Sbjct: 56 VGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 115 Query: 435 ANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPILRKGF 608 ANREKMTQIMFETFN+PAMYVAIQA SGD G+ H PI +GF Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD-GVSHTVPIY-EGF 171 Score = 87.8 bits (208), Expect = 5e-18 Identities = 37/50 (74%), Positives = 44/50 (88%) Frame = +1 Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252 +++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+ Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54 >At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 Actin 8 {Arabidopsis thaliana}; nearly identical to SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and to At3g18780 Length = 377 Score = 184 bits (449), Expect = 3e-47 Identities = 90/118 (76%), Positives = 96/118 (81%) Frame = +3 Query: 255 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 434 VGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK Sbjct: 56 VGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 115 Query: 435 ANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPILRKGF 608 ANREKMTQIMFETFN+PAMYVAIQA SGD G+ H PI +GF Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD-GVSHTVPIY-EGF 171 Score = 87.8 bits (208), Expect = 5e-18 Identities = 37/50 (74%), Positives = 44/50 (88%) Frame = +1 Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252 +++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+ Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54 >At2g42100.1 68415.m05205 actin, putative very strong similarity to SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493 Actin 3 {Arabidopsis thaliana}; contains Pfam profile PF00022: Actin Length = 378 Score = 166 bits (403), Expect = 1e-41 Identities = 77/113 (68%), Positives = 88/113 (77%) Frame = +3 Query: 255 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 434 VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK Sbjct: 57 VGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPK 116 Query: 435 ANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPI 593 NREKMTQIMFE+F P+MY+ IQA SGD G+ H PI Sbjct: 117 VNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGD-GVSHTVPI 168 Score = 88.2 bits (209), Expect = 4e-18 Identities = 38/50 (76%), Positives = 45/50 (90%) Frame = +1 Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 252 +E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD+ Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDT 55 >At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Arabidopsis thaliana] gi|9293903|dbj|BAB01806 Length = 329 Score = 160 bits (388), Expect = 8e-40 Identities = 68/87 (78%), Positives = 81/87 (93%) Frame = +3 Query: 249 LLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 428 L VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLN Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68 Query: 429 PKANREKMTQIMFETFNTPAMYVAIQA 509 PKA+REKMTQIMFETF P+MY+ +QA Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQA 95 Score = 29.5 bits (63), Expect = 1.9 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = +2 Query: 506 SVLSLYASGRTTGIVLD 556 + LSL+ASGRTTG VLD Sbjct: 95 AALSLHASGRTTGTVLD 111 >At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin 11 {Arabidopsis thaliana}; contains Pfam profile PF00022: Actin Length = 366 Score = 154 bits (374), Expect = 4e-38 Identities = 71/96 (73%), Positives = 80/96 (83%) Frame = +3 Query: 222 RDGRYGTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 401 RDG E VG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP Sbjct: 35 RDGLNPNESY-VGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93 Query: 402 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 509 VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+ Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQS 129 Score = 52.4 bits (120), Expect = 2e-07 Identities = 21/32 (65%), Positives = 26/32 (81%) Frame = +1 Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 213 +V D G GM +AGFAGD+AP+ VFP +VGRPR Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35 Score = 35.5 bits (78), Expect = 0.028 Identities = 17/25 (68%), Positives = 19/25 (76%) Frame = +2 Query: 506 SVLSLYASGRTTGIVLDFRRRGSST 580 SVL LY+SGRTTG+VLD R S T Sbjct: 129 SVLYLYSSGRTTGVVLDLGERVSHT 153 >At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly identical to actin-related protein 2 (ARP2) [Arabidopsis thaliana] GI:3818624; contains Pfam profile PF00022: Actin Length = 389 Score = 105 bits (251), Expect = 3e-23 Identities = 48/116 (41%), Positives = 69/116 (59%) Frame = +3 Query: 249 LLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 428 ++VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLN Sbjct: 53 IVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLN 112 Query: 429 PKANREKMTQIMFETFNTPAMYVAIQACSRCTRPVVPPVSCWTSGDGGLPHPCPIL 596 P NREKM + MFE +N +++ IQA + SGD G+ H P++ Sbjct: 113 PSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGD-GVTHVVPVV 167 Score = 45.6 bits (103), Expect = 3e-05 Identities = 18/31 (58%), Positives = 24/31 (77%) Frame = +1 Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 210 +V DNG+G K GFAG++ P +VFP +VGRP Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37 >At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical to actin-related protein 3 (ARP3) [Arabidopsis thaliana] GI:21427461; contains Pfam profile PF00022: Actin Length = 427 Score = 93.5 bits (222), Expect = 1e-19 Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 3/88 (3%) Frame = +3 Query: 255 VGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 425 +GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL Sbjct: 70 IGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPL 129 Query: 426 NPKANREKMTQIMFETFNTPAMYVAIQA 509 P +RE +I+FETFN P +Y+A+ + Sbjct: 130 TPPESREYTGEILFETFNVPGLYIAVNS 157 Score = 35.9 bits (79), Expect = 0.021 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = +1 Query: 115 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 201 A+V+DNG+G K GFAG+ P + P++V Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36 >At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary identical to actin-related protein 4 (ARP4) [Arabidopsis thaliana] GI:21427463; contains Pfam profile PF00022: Actin; supporting cDNA gi|21427462|gb|AF507912.1| Length = 441 Score = 83.0 bits (196), Expect = 1e-16 Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 1/85 (1%) Frame = +3 Query: 249 LLVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 425 L VG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PL Sbjct: 75 LYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPL 134 Query: 426 NPKANREKMTQIMFETFNTPAMYVA 500 N + REK ++MFE + PA+++A Sbjct: 135 NTQQQREKAAELMFEKYKVPALFMA 159 Score = 56.8 bits (131), Expect = 1e-08 Identities = 23/34 (67%), Positives = 31/34 (91%) Frame = +1 Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 204 +EV+A+VVD GS CKAG+AG+DAP+AVFPS++G Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38 >At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical to actin-related protein 5 (ARP5) GI:21489922 from [Arabidopsis thaliana] Length = 145 Score = 66.1 bits (154), Expect = 2e-11 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%) Frame = +3 Query: 225 DGRYGTEGLLVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 401 D G L G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120 Query: 402 VLLTEAPLNPKANREK 449 +LL E PLN + REK Sbjct: 121 MLLAEPPLNSQQQREK 136 Score = 57.2 bits (132), Expect = 8e-09 Identities = 24/34 (70%), Positives = 31/34 (91%) Frame = +1 Query: 103 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 204 +EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38 >At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical to actin-related protein 7 (ARP7) [Arabidopsis thaliana] GI:21427469; contains Pfam profile PF00022: Actin Length = 363 Score = 57.2 bits (132), Expect = 8e-09 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Frame = +3 Query: 303 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 479 PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116 Query: 480 TPAMYVAIQA 509 Y + QA Sbjct: 117 VSGFYASEQA 126 Score = 27.5 bits (58), Expect = 7.5 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +1 Query: 115 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 207 ALVVD GS KAG A D +P + PS + R Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34 >At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly identical to actin-related protein 6 (ARP6) [Arabidopsis thaliana] GI:21427467; contains Pfam profile PF00022: Actin Length = 421 Score = 54.8 bits (126), Expect = 4e-08 Identities = 24/69 (34%), Positives = 41/69 (59%) Frame = +3 Query: 294 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 473 ++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120 Query: 474 FNTPAMYVA 500 F ++Y+A Sbjct: 121 FGFSSLYIA 129 Score = 32.7 bits (71), Expect = 0.20 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +1 Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 210 +V+DNG G+ KAG G+ P V P+ + +P Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35 >At3g12380.1 68416.m01543 actin/actin-like family protein similar to SP|P53946 Actin-like protein ARP5 {Saccharomyces cerevisiae}; contains Pfam profile PF00022: Actin Length = 724 Score = 47.2 bits (107), Expect = 9e-06 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Frame = +3 Query: 303 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 479 P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+ Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144 Query: 480 TPAMYVAIQA 509 PA+ + A Sbjct: 145 VPAVAFGVDA 154 Score = 42.7 bits (96), Expect = 2e-04 Identities = 17/34 (50%), Positives = 25/34 (73%) Frame = +1 Query: 118 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 219 +V+DNG+ + G+AG+ PR VF +IV RPRH+ Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55 >At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase family protein similar to laccase [Pinus taeda][GI:13661201], lac110 laccase, Populus trichocarpa, EMBL:PTY13773 Length = 584 Score = 33.9 bits (74), Expect = 0.086 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = -3 Query: 239 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 102 P P I P RGL +G T+ +SSPA+P + +P +ST + TS+ Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332 >At1g16690.2 68414.m01999 transcription factor-related similar to enhancer of polycomb (GI:11907923)[Homo sapiens] Length = 439 Score = 30.7 bits (66), Expect = 0.80 Identities = 22/67 (32%), Positives = 29/67 (43%) Frame = +3 Query: 249 LLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 428 LL D A L++KY + H I + W + +IW L+ P PV T P N Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220 Query: 429 PKANREK 449 REK Sbjct: 221 VFRPREK 227 >At1g16690.1 68414.m01998 transcription factor-related similar to enhancer of polycomb (GI:11907923)[Homo sapiens] Length = 439 Score = 30.7 bits (66), Expect = 0.80 Identities = 22/67 (32%), Positives = 29/67 (43%) Frame = +3 Query: 249 LLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 428 LL D A L++KY + H I + W + +IW L+ P PV T P N Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220 Query: 429 PKANREK 449 REK Sbjct: 221 VFRPREK 227 >At1g31850.3 68414.m03915 dehydration-responsive protein, putative strong similarity to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase Length = 603 Score = 29.1 bits (62), Expect = 2.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 542 RWYDRTRTARARLDGDVHGGRVECFEHD 459 +W +R A R+ GDVHGG +HD Sbjct: 405 KWPERLHVAPERI-GDVHGGSANSLKHD 431 >At1g31850.2 68414.m03914 dehydration-responsive protein, putative strong similarity to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase Length = 603 Score = 29.1 bits (62), Expect = 2.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 542 RWYDRTRTARARLDGDVHGGRVECFEHD 459 +W +R A R+ GDVHGG +HD Sbjct: 405 KWPERLHVAPERI-GDVHGGSANSLKHD 431 >At1g31850.1 68414.m03913 dehydration-responsive protein, putative strong similarity to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase Length = 603 Score = 29.1 bits (62), Expect = 2.4 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 542 RWYDRTRTARARLDGDVHGGRVECFEHD 459 +W +R A R+ GDVHGG +HD Sbjct: 405 KWPERLHVAPERI-GDVHGGSANSLKHD 431 >At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (IRX3) identical to gi:5230423 Length = 1026 Score = 28.7 bits (61), Expect = 3.2 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +2 Query: 416 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSVLSLY 523 GSP+ +G + E+D D + NI+H + +H + LY Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129 >At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative similar to SP:O04130 from [Arabidopsis thaliana] Length = 588 Score = 28.3 bits (60), Expect = 4.3 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = -1 Query: 349 IFSMSSQLVTIPCSMGYLRVRIPLLLCASSPTKSPSVP 236 IFS SS+LVT P S+ +R R ++L SS + P Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSSSSGGGGKP 47 >At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to zinc dependent protease [Arabidopsis thaliana] GI:7650138; contains Pfam profile PF00004: ATPase AAA family Length = 855 Score = 27.9 bits (59), Expect = 5.7 Identities = 12/46 (26%), Positives = 24/46 (52%) Frame = +3 Query: 234 YGTEGLLVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 371 Y +G +G+E SK+ I+ ++ ++ + W+D+ K H N Sbjct: 180 YYKDGEPLGEEEDSKKEIIFRRHIVDRMPIDGWNDVWKKLHQQIVN 225 >At2g41830.1 68415.m05169 cyclin-related contains Pfam profile PF02984: Cyclin, C-terminal domain Length = 1025 Score = 27.9 bits (59), Expect = 5.7 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = -2 Query: 264 HLLLRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIV 127 H LL +L+ H DH +++ PS S +S + H+ IV Sbjct: 342 HFLLSMLIKHLDHKSVLKHPSMQLNILEVTSSLSETAKVEHSATIV 387 >At1g28320.1 68414.m03475 protease-related similar to Protease degS [Precursor] (SP:P44947) [Haemophilus influenzae]; similar to DegP protease precursor (GI:2565436) [Arabidopsis thaliana] Length = 709 Score = 27.9 bits (59), Expect = 5.7 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 518 LYASGRTTGIVLDFRRRGSSTPVPHFTKGIP 610 L +SG G+V R G+ T +PH IP Sbjct: 585 LNSSGHMIGLVTSNARHGAGTVIPHLNFSIP 615 >At5g06610.1 68418.m00747 expressed protein contains Pfam profile PF04788: Protein of unknown function (DUF620) Length = 368 Score = 27.5 bits (58), Expect = 7.5 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = -3 Query: 215 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 93 WR P + + A+GA P + AL +PL+ ++ +S+ + Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207 >At1g02110.1 68414.m00137 proline-rich family protein contains proline-rich domain, INTERPRO:IPR000694 Length = 679 Score = 27.5 bits (58), Expect = 7.5 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = -1 Query: 289 RIPLLLCASSPTKSPSVPYRPSRPDGGAFPRS 194 R+P +L SSP+ SP+ + P+ + RS Sbjct: 107 RLPHILSDSSPSSSPATSFYPTAHQNSTYSRS 138 >At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, putative similar to cellulose synthase-1 [gi:9622874] and -2 [gi:9622876] from Zea mays Length = 1081 Score = 27.1 bits (57), Expect = 9.9 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +2 Query: 410 H*GSPQPQGQQREDDPDHVRN 472 H GSP+ +G + EDD D + N Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111 >At3g12970.1 68416.m01616 expressed protein Length = 381 Score = 27.1 bits (57), Expect = 9.9 Identities = 12/32 (37%), Positives = 15/32 (46%) Frame = +2 Query: 416 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSV 511 G+P P + R H+RN R RRH V Sbjct: 222 GTPNPFARSRAHHHHHLRNQNQPRKPRRHTQV 253 >At2g43180.4 68415.m05365 expressed protein Length = 466 Score = 27.1 bits (57), Expect = 9.9 Identities = 9/30 (30%), Positives = 17/30 (56%) Frame = -2 Query: 576 EDPRRRKSSTIPVVRPDAYSESTLGWRRTW 487 +DP +R+ + V+ P+ Y+E + R W Sbjct: 377 DDPEQREDLIVEVITPEVYNEPRNPFSRIW 406 >At2g43180.3 68415.m05363 expressed protein Length = 478 Score = 27.1 bits (57), Expect = 9.9 Identities = 9/30 (30%), Positives = 17/30 (56%) Frame = -2 Query: 576 EDPRRRKSSTIPVVRPDAYSESTLGWRRTW 487 +DP +R+ + V+ P+ Y+E + R W Sbjct: 376 DDPEQREDLIVEVITPEVYNEPRNPFSRIW 405 >At2g43180.2 68415.m05364 expressed protein Length = 451 Score = 27.1 bits (57), Expect = 9.9 Identities = 9/30 (30%), Positives = 17/30 (56%) Frame = -2 Query: 576 EDPRRRKSSTIPVVRPDAYSESTLGWRRTW 487 +DP +R+ + V+ P+ Y+E + R W Sbjct: 377 DDPEQREDLIVEVITPEVYNEPRNPFSRIW 406 >At2g43180.1 68415.m05362 expressed protein Length = 479 Score = 27.1 bits (57), Expect = 9.9 Identities = 9/30 (30%), Positives = 17/30 (56%) Frame = -2 Query: 576 EDPRRRKSSTIPVVRPDAYSESTLGWRRTW 487 +DP +R+ + V+ P+ Y+E + R W Sbjct: 377 DDPEQREDLIVEVITPEVYNEPRNPFSRIW 406 >At2g31900.1 68415.m03897 myosin family protein contains Pfam profiles: PF00063 myosin head (motor domain), PF01843 DIL domain, PF00612 IQ calmodulin-binding motif, PF02736 myosin N-terminal SH3-like domain Length = 1556 Score = 27.1 bits (57), Expect = 9.9 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = +3 Query: 327 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 476 NW +E + + + + P LL EA + PK+ E Q M++T+ Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529 >At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to auxin down regulated GB:X69640 GI:296442 from [Glycine max]; contains Pfam profile PF00234: Protease inhibitor/seed storage/LTP family Length = 297 Score = 27.1 bits (57), Expect = 9.9 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%) Frame = +3 Query: 462 MFETFNTPAMYVAIQACSRCTR--PVVPPVSCWTSGDGGLPHPCP 590 +F F + IQAC+ CTR P VP G GG P P Sbjct: 11 VFLIFTVITLPPTIQACTPCTRPHPPVPKPPQHGGGGGGGSKPPP 55 >At1g55420.1 68414.m06339 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 725 Score = 27.1 bits (57), Expect = 9.9 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Frame = -1 Query: 400 GCSSGATRSSL*K-V*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPTKSPSVPY 233 GC S + S + + C+ F + + T+PC Y R PL LC + S Y Sbjct: 529 GCGSDSCSSYFLECIKCKSF-LGIKCATLPCEAHYTHDRHPLTLCYEEEEDTTSGQY 584 >At1g17540.1 68414.m02157 protein kinase-related similar to serine/threonine protein kinase Fen [Lycopersicon esculentum] GI:1809259 Length = 733 Score = 27.1 bits (57), Expect = 9.9 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = +2 Query: 422 PQ-PQGQQREDDPDHVRNIQHARHVRRHPSVLS 517 PQ PQG P + QH H +HPS++S Sbjct: 160 PQTPQGPHTPQGPQTPQAPQHPPHPSKHPSMMS 192 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,581,588 Number of Sequences: 28952 Number of extensions: 369994 Number of successful extensions: 1176 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 1103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1162 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1236350304 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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