Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0036
(602 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 30 1.2
05_01_0389 + 3039793-3040194 30 1.2
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 30 1.2
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 30 1.6
12_02_1058 - 25735902-25736000,25736085-25736152,25736575-257366... 29 2.8
12_02_1036 - 25587313-25587890,25589209-25589272,25589356-255894... 29 2.8
07_01_1173 + 11092482-11093465,11093552-11093914 29 2.8
01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646 29 2.8
08_01_0649 + 5607234-5608397,5609358-5609513,5609598-5609796,561... 29 3.7
05_04_0396 - 20934444-20934969,20935042-20935316,20935447-20935581 29 3.7
05_02_0155 + 7146999-7147276,7147447-7147492,7148153-7148284 29 3.7
12_01_0727 + 6446283-6449300 28 5.0
04_04_1249 - 32067644-32067787,32068245-32068346,32068415-320684... 28 5.0
04_04_0922 - 29439313-29439718,29439842-29440053 28 5.0
02_01_0566 - 4144104-4144230,4144492-4144649,4145770-4146885 28 5.0
10_08_0397 + 17571492-17571664,17571875-17572034,17572140-175722... 28 6.5
05_05_0006 + 21450739-21451434 28 6.5
05_01_0463 - 3666626-3666933,3667060-3667258,3667388-3667629,366... 28 6.5
11_04_0098 - 13459424-13459704,13459954-13460074 27 8.7
10_07_0016 + 11826066-11826773 27 8.7
07_03_0476 - 18547223-18548187,18548743-18549958 27 8.7
06_03_0499 + 21461608-21463427,21463517-21463627,21463867-214641... 27 8.7
05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594 27 8.7
03_04_0018 - 16484109-16484300,16484575-16484656,16484746-164848... 27 8.7
03_01_0065 + 529200-529438,529770-529929,530217-530299,530398-53... 27 8.7
02_03_0212 - 16460665-16460766,16460971-16461298,16461379-164615... 27 8.7
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 27 8.7
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 27 8.7
>07_03_0011 +
12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 398 PVRSSDVSAPCHSGWSDPSTSRRW 469
P S V PC SGWS ST+R W
Sbjct: 273 PNVSKRVQFPCMSGWSGDSTARIW 296
>05_01_0389 + 3039793-3040194
Length = 133
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 365 SRRREACWPAAPVRSSDVSAPCHSGWSDPSTSRRWRT 475
SRRR W R++ ++ GW+ P T R WR+
Sbjct: 19 SRRRAVRWMKGVRRAARLTGGGDDGWAAPPTRRLWRS 55
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -3
Query: 261 VFELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHAL 91
+ +L K QQQQ + D+EL LS+ + +L + + L ++ QKK L
Sbjct: 784 ILDLNSEKDAVLLQQQQSLAKISDLELQLSKTQLELKNSEQKMQLLELEITQKKTCL 840
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = -1
Query: 410 NFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWERLVQSSS*RETSCR 231
N ++LQA + R ++ + +RLLE F+ P+I + L+ + E SC
Sbjct: 210 NHNKKLQAEERRSMWVSVLAERLLESVPFSPPRIVALKGREAA--SELINLNKETEASCS 267
Query: 230 KRLNNSS 210
R NSS
Sbjct: 268 NRSENSS 274
>12_02_1058 -
25735902-25736000,25736085-25736152,25736575-25736638,
25736838-25736919,25737503-25737561,25737664-25737723,
25737884-25738046,25738236-25738360,25738827-25738859,
25739098-25739160,25739364-25739423,25739972-25740196,
25740272-25740433
Length = 420
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 49 GVDAFGVRAHVGLQQRVLLLEILHA-GQILPVVLAEQLSFNFREPKFNVLD 198
GV +FG+ A + E +A + PVV AE L N ++P VLD
Sbjct: 82 GVGSFGIAARCNATSSSAVSEATNALPRTEPVVSAEWLHANLKDPDVKVLD 132
>12_02_1036 -
25587313-25587890,25589209-25589272,25589356-25589448,
25589533-25589683,25590474-25590539,25590594-25590907
Length = 421
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Frame = +2
Query: 203 RLYCCC*AA------SCNLFPFSSKTAPVAPIFRPALPRETIFEVEQNVRAQADACRRPL 364
+LYC C A+ SC P +K+ P PALP + + +E + R P+
Sbjct: 126 KLYCVCFASGSHCSESCGCDPCYNKSIHGVPRSTPALPLKAVQTLETGQDSVEQLIRSPM 185
Query: 365 SRRREAC 385
R C
Sbjct: 186 DFGRRKC 192
>07_01_1173 + 11092482-11093465,11093552-11093914
Length = 448
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 362 LSRRREACWPAAPVRSSDVSAPCHSGWSDPSTS 460
LSRR + WP+AP+R D P S + + S
Sbjct: 48 LSRRWRSLWPSAPLRLHDSDLPSRSQYLSAAIS 80
>01_06_0666 + 31040768-31041079,31041716-31041889,31041996-31042646
Length = 378
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 332 RAQADACRRPLSRRREACWPAAPVRSSDVSAPCHSGWSDPSTSRR 466
R+ D+ RRP S A A V S+V PCH G + + +RR
Sbjct: 46 RSGVDSGRRP-SEAALAAVAAVAVEPSEVRRPCHCGEVENAIARR 89
>08_01_0649 +
5607234-5608397,5609358-5609513,5609598-5609796,
5612419-5613608,5614505-5614660,5614742-5615041
Length = 1054
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 290 ALPRETIFEVEQNVRAQADACRRPLSRRREACWPAAPVRSSDVSAPC 430
ALP +F + +++A+ LSRR W +AP DV PC
Sbjct: 532 ALPDAVLFRIVSHLKAREAVRTSGLSRRWRHVWASAP--RVDVRYPC 576
>05_04_0396 - 20934444-20934969,20935042-20935316,20935447-20935581
Length = 311
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 356 RPLSRRRE-ACWPAAPVRSSDVSAPCHSGWSDPSTSRRWRT 475
RPL R A PAA SS V+ P W D + R RT
Sbjct: 23 RPLGRGAALALAPAARTSSSSVTGPRRGSWEDVARRRSGRT 63
>05_02_0155 + 7146999-7147276,7147447-7147492,7148153-7148284
Length = 151
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = -3
Query: 450 GSDQPEWQGAETSELRTGAAGQQASRRRDNGRRQASA*ARTFCSTSNIVSRGRAGRNMGA 271
G + E A S R+GA ++A RR GRR+++ +TS G GR G
Sbjct: 33 GIEGKERSAAHLSHARSGAKQKRARARRRAGRRRSTGAGEGSATTSG----GGIGRADGN 88
Query: 270 TGAVFELKG 244
V+ KG
Sbjct: 89 ERLVWRSKG 97
>12_01_0727 + 6446283-6449300
Length = 1005
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 310 YRLAWKSWAEYGSDWCSLRAEGKQVAGSGSTTAVQPGRRG 191
Y A++SWA G+D CS EG + G G RG
Sbjct: 52 YSAAFRSWAAAGTDCCSW--EGVRCGGGGDGRVTSLDLRG 89
>04_04_1249 -
32067644-32067787,32068245-32068346,32068415-32068438,
32068439-32068543,32068625-32068729,32068885-32068966,
32069254-32069456,32069534-32069692,32070045-32070154,
32070264-32070405,32070544-32070690,32070773-32070847,
32070923-32071132,32071223-32071426,32071514-32071633,
32071743-32071852,32072033-32072177,32072266-32072499,
32072611-32072646
Length = 818
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 222 QQQQYNRAVEDIELWLSEVE-GQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAERIDA 49
Q +Y + + W E+E G L+ ++ + +N Q HA LEA +SS E + A
Sbjct: 95 QMSEYIKKLRACIRWYIELEDGYLVEQEKLRSTMDAENAQ--HAKLEAQLSSDLEELKA 151
>04_04_0922 - 29439313-29439718,29439842-29440053
Length = 205
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -2
Query: 262 SLRAEGKQVAGSGSTTAVQPGRRGH*TLALGS*RTAAQRGLREGSDQRAESPEEARAVGG 83
S +EG ++A S++ GH ++ +RGL + D +++S AVGG
Sbjct: 34 SSSSEGMELADDASSSGSSSSAAGHFEMSSLMTELPLKRGLSKFFDGKSQSFASLAAVGG 93
Query: 82 RRELA 68
++A
Sbjct: 94 LEDMA 98
>02_01_0566 - 4144104-4144230,4144492-4144649,4145770-4146885
Length = 466
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 8 GSLFYELARPGSRMASMRSACELTSASNSACFFWR 112
GSLFY++ + +A RS LT A A + W+
Sbjct: 392 GSLFYDMKQKEMELAERRSKGFLTKAETQAKYGWQ 426
>10_08_0397 +
17571492-17571664,17571875-17572034,17572140-17572222,
17572333-17572468,17572515-17572610,17573105-17573218,
17573322-17573405,17573493-17573648,17573744-17573818,
17574318-17574424,17574508-17574688,17574832-17575020,
17575397-17575477,17575621-17575755,17576007-17576329,
17576503-17576608,17576734-17576883,17577034-17577180
Length = 831
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Frame = -1
Query: 368 EITAVGKRLLELEHFAQPQISSRVEELGGIWERLVQSSS*RETSCRKRLNN-----SSTT 204
++TA+ K L+E Q Q+S V E + ++L S +TSC + +
Sbjct: 76 KLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLGNDTSCESNVTTPQNPLRDAS 135
Query: 203 GPSRTLNFGSRKLKDSCSART 141
PS L L + S T
Sbjct: 136 NPSGLLTIAEETLTEFLSKAT 156
>05_05_0006 + 21450739-21451434
Length = 231
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 275 PIFRPALPRETIFEVEQNVRAQADACRRPLSRRREACW 388
P A T++EVE VR Q R RRR A W
Sbjct: 105 PATYAATNTHTLYEVEDEVRRQRRKDMRRRRRRRAAAW 142
>05_01_0463 -
3666626-3666933,3667060-3667258,3667388-3667629,
3667823-3669035
Length = 653
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = -1
Query: 464 DDSYLDPTNLNG--KVQKHQNF-EQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVE 294
D+ LD NL+ ++ K + QE ++N+P + E+ + + LLELE P++ +
Sbjct: 588 DNKLLDDVNLDEAERISKVACWCVQENESNRPTMGEVVQILEGLLELEMPPMPRLLQAIT 647
Query: 293 ELG 285
G
Sbjct: 648 ATG 650
>11_04_0098 - 13459424-13459704,13459954-13460074
Length = 133
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 362 LSRRREACWPAAPVRSSDVSAPCHSG 439
+ RRR CW A+P R S A H G
Sbjct: 19 IGRRRAECWAASPPRRSTSWACGHDG 44
>10_07_0016 + 11826066-11826773
Length = 235
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = -2
Query: 184 TLALGS*RTAAQRGLREGSDQRAESPEEARAVGGRRELA 68
T A G+ R AA R D+ A EEA A GGR A
Sbjct: 61 TAACGAGRWAAARDEAAAQDEAAARDEEAGADGGRLHAA 99
>07_03_0476 - 18547223-18548187,18548743-18549958
Length = 726
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 224 LNNSSTTGPSRTLNFGSRKLKDSCSARTTGRI*PACRISR 105
++N+++TGPS T G + C AR +I P CR R
Sbjct: 322 VSNNASTGPSGTPRPGPPPTRTGCQARMVIKITP-CRTYR 360
>06_03_0499 +
21461608-21463427,21463517-21463627,21463867-21464143,
21464265-21464353,21464508-21464595,21464698-21464907,
21464985-21465110,21465429-21465620,21466532-21467188
Length = 1189
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 213 QYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSH 67
++N + + + L + +GQ+L G D L K ++EAD S H
Sbjct: 616 EFNSKRKRMSVILKDEDGQILLFCKGADSIIFDRLAKNGRMIEADTSKH 664
>05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594
Length = 622
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 171 PRAK--VQCPRRPGCTAVVEPLPATCFPSARRLHQSLPYSAQLFHA 302
PRA V+ PRR G AVV PL + F S + + SLP S F A
Sbjct: 53 PRAPSLVRVPRRGG-EAVVPPLESPGFRSVQPVSVSLPASPSGFGA 97
>03_04_0018 -
16484109-16484300,16484575-16484656,16484746-16484856,
16484937-16485188,16485274-16485677,16486035-16486952,
16486990-16487475,16487566-16487763
Length = 880
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +2
Query: 395 APVRSSDVSAPCHSGWS---DPSTSRRWRT 475
AP+ S +V+AP SG + D ST WRT
Sbjct: 10 APIASQEVNAPQKSGSNKQPDASTEETWRT 39
>03_01_0065 +
529200-529438,529770-529929,530217-530299,530398-530488,
530585-530680,531107-531220,531325-531408,531493-531648,
531755-531829,532172-532278,532361-532544,532970-533158,
533372-533452,533794-533925,534302-534355,534484-534809,
534925-535030,535491-535640,535763-535909
Length = 857
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Frame = -1
Query: 368 EITAVGKRLLELEHFAQPQISSRVEELGGIWERLVQSSS*RETSCRKRLNN-----SSTT 204
++TA+ K L+E Q Q+S V E + ++L + +TSC + +
Sbjct: 98 KLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTPLANDTSCESNVTTPQNPLRDAS 157
Query: 203 GPSRTLNFGSRKLKDSCSART 141
PS L+ L + S T
Sbjct: 158 NPSGLLSIAEETLTEFLSKAT 178
>02_03_0212 -
16460665-16460766,16460971-16461298,16461379-16461502,
16461576-16461825,16462185-16462265,16463030-16463114,
16463200-16463321,16463865-16464672,16464775-16465027,
16465998-16466796
Length = 983
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +2
Query: 341 ADACRRPLSRRREACWPAAPVRSSDVSAPCHSGWSDPSTSRRW 469
ADA R P SR+R AAP R S + P +DP W
Sbjct: 183 ADAFRAPASRQRWGDEAAAPFRESRRTQPALCLVADPCRGVVW 225
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +3
Query: 132 PSRSPR*AAVLQLPRAKVQCPRRPGCTAVVEPLPATCFPSARRLHQSLPYSAQLFHARRY 311
PS PR A+ PR +V CP P + PA+ + + Q +P S + R +
Sbjct: 31 PSAPPRPRALSAAPRGRVVCPAAPASS------PASTTDAGQDRLQKVPVS----NIRNF 80
Query: 312 LRLSKMFELKQTLAD 356
++ + K TLAD
Sbjct: 81 SIIAHIDHGKSTLAD 95
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -3
Query: 279 MGATGAVFELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKK 100
+ A+G + L G QE + ++E +L +E L+ E+Y K L Q QKK
Sbjct: 198 VAASGVLAGLYGTSQQEKKALESVVSSMES-KLAENEAAISLMRENYEKRLLDQQTAQKK 256
Query: 99 HAL 91
A+
Sbjct: 257 QAM 259
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,071,508
Number of Sequences: 37544
Number of extensions: 328709
Number of successful extensions: 1480
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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