Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0036
(602 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4655| Best HMM Match : Spectrin (HMM E-Value=0) 80 2e-15
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 8e-15
SB_7706| Best HMM Match : Spectrin (HMM E-Value=0) 68 5e-12
SB_42689| Best HMM Match : Spectrin (HMM E-Value=0) 62 3e-10
SB_29386| Best HMM Match : Spectrin (HMM E-Value=1.9e-29) 60 1e-09
SB_50472| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_33210| Best HMM Match : Spectrin (HMM E-Value=1.3e-12) 49 3e-06
SB_15107| Best HMM Match : Spectrin (HMM E-Value=1.8e-13) 47 1e-05
SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_59804| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_38289| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_5418| Best HMM Match : Spectrin (HMM E-Value=1.50001e-40) 39 0.004
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_53744| Best HMM Match : Spectrin (HMM E-Value=1.8e-28) 37 0.011
SB_7010| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.044
SB_32817| Best HMM Match : Spectrin (HMM E-Value=3.7e-21) 35 0.058
SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 33 0.24
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097) 33 0.24
SB_19685| Best HMM Match : Retrotrans_gag (HMM E-Value=0.061) 33 0.24
SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_32265| Best HMM Match : Bim_N (HMM E-Value=1.5) 31 0.54
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_42397| Best HMM Match : rve (HMM E-Value=0.0007) 31 0.72
SB_11337| Best HMM Match : Bim_N (HMM E-Value=0.45) 31 0.72
SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 31 0.72
SB_37908| Best HMM Match : Retrotrans_gag (HMM E-Value=0.067) 30 1.3
SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_1237| Best HMM Match : rve (HMM E-Value=0.00029) 30 1.3
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07) 30 1.3
SB_29927| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 30 1.3
SB_10546| Best HMM Match : Bim_N (HMM E-Value=0.83) 30 1.3
SB_59115| Best HMM Match : Spectrin (HMM E-Value=0) 30 1.7
SB_54885| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_22904| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.03) 29 2.9
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 29 2.9
SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014) 28 5.1
SB_45545| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 28 5.1
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_35552| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_910| Best HMM Match : Cation_efflux (HMM E-Value=0.056) 28 5.1
SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_54429| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_44676| Best HMM Match : Bim_N (HMM E-Value=0.83) 27 8.8
SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07) 27 8.8
>SB_4655| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 934
Score = 79.8 bits (188), Expect = 2e-15
Identities = 43/105 (40%), Positives = 63/105 (60%)
Frame = -1
Query: 539 KYQQFETRL**N*RLGKRES*KFATDDSYLDPTNLNGKVQKHQNFEQELQANKPRVDEIT 360
K QQFE R ++ E K A D+SY D TNL GK+QKHQ FE EL AN+ R+D +
Sbjct: 539 KLQQFE-RDADEVKVWINEKLKTAKDESYKDLTNLQGKIQKHQAFEAELNANQSRLDAVD 597
Query: 359 AVGKRLLELEHFAQPQISSRVEELGGIWERLVQSSS*RETSCRKR 225
G +L+ +H+A QI R++EL +W L + S+ + + +K+
Sbjct: 598 NSGHQLISADHYASQQIQERLDELHEMWRNLFKHSNNKVQNLQKK 642
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/78 (39%), Positives = 48/78 (61%)
Frame = -1
Query: 485 ES*KFATDDSYLDPTNLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQIS 306
E + A+D+SY DP NL K+QKHQ FE E+ A+ + E+T G+ ++ H+A I
Sbjct: 66 EKLQIASDESYRDPMNLQDKLQKHQAFEAEISAHSYAITELTDTGEEMINESHYASEDIR 125
Query: 305 SRVEELGGIWERLVQSSS 252
R++EL +WE L+ S+
Sbjct: 126 ERLDELIRLWELLLSKSA 143
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = -3
Query: 249 KGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSS 70
KG+ L ++ Q QY V + + WL E E + S DYGKD S Q + KKH + +D+ +
Sbjct: 765 KGH-LDDSLQSHQYLVDVSEADSWLMEKEPVVTSSDYGKDEDSAQAMLKKHEAIMSDLEA 823
Query: 69 HAERIDAIREPGR 31
++ ID +RE +
Sbjct: 824 YSTVIDGLREQSK 836
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/74 (32%), Positives = 46/74 (62%)
Frame = -3
Query: 255 ELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADV 76
E + KL+E+ + QQ+ R +++++W++E E Y KDLT++Q +KH EA++
Sbjct: 528 EARRLKLEESRKLQQFERDADEVKVWINEKLKTAKDESY-KDLTNLQGKIQKHQAFEAEL 586
Query: 75 SSHAERIDAIREPG 34
+++ R+DA+ G
Sbjct: 587 NANQSRLDAVDNSG 600
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/67 (32%), Positives = 41/67 (61%)
Frame = -3
Query: 252 LKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVS 73
++ +L+ A + + R ++ + W++E + L S+DYGKDL SV L +KH LE D++
Sbjct: 250 MRKERLESAHEIHSFYRDADETKNWINEKDKVLSSDDYGKDLASVNALSRKHEALERDLA 309
Query: 72 SHAERID 52
+ ++ D
Sbjct: 310 ALEDKSD 316
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/74 (27%), Positives = 47/74 (63%)
Frame = -3
Query: 255 ELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADV 76
+L+ +L++A + Q+ R +++E W++E + Q+ S++ +D ++Q+ +KH EA++
Sbjct: 38 KLRRRRLEDAKRYFQFKRDADEVEDWINE-KLQIASDESYRDPMNLQDKLQKHQAFEAEI 96
Query: 75 SSHAERIDAIREPG 34
S+H+ I + + G
Sbjct: 97 SAHSYAITELTDTG 110
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/70 (34%), Positives = 37/70 (52%)
Frame = -3
Query: 249 KGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSS 70
KG L A ++ Y R V+++ W+SE E SE+ G+DL V LQKK D+ +
Sbjct: 145 KGRMLLFAQKRVHYLREVDEVMSWISEKEAIATSEEIGRDLEHVVVLQKKFDDFLKDLQA 204
Query: 69 HAERIDAIRE 40
+ R+ I +
Sbjct: 205 NESRVTYIND 214
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = -3
Query: 120 VQNLQKKHALLEADVSSHAERIDAI 46
VQNLQKKH L+EADV +H E+I+A+
Sbjct: 636 VQNLQKKHGLIEADVITHIEKIEAV 660
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -1
Query: 422 QKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWERL 267
+K +F ++LQAN+ RV I + +L E H IS + +E+ WERL
Sbjct: 193 KKFDDFLKDLQANESRVTYINDLADQLAEEGHPDMELISMKQQEVNEAWERL 244
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -1
Query: 473 FATDDSYLDPTN-LNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSR 300
F D++ D + + ++KH++FE A + + I RL++ +H+A+ +++ R
Sbjct: 454 FLADETLGDSLDEVEAMIKKHEDFENSFAAQEEKFKNIDDFANRLIDGDHYAKDEVAER 512
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = -2
Query: 565 ALLGKTALQS---INSSKRDCDKTKGWVNEK 482
A++ K L+S I+S RD D+TK W+NEK
Sbjct: 248 AVMRKERLESAHEIHSFYRDADETKNWINEK 278
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 77.4 bits (182), Expect = 8e-15
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = -3
Query: 249 KGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSS 70
KGNKLQ+A +Q+Q NRA+ED+ +W++E E L ED G+DL V+ L KKH LLE+D+
Sbjct: 731 KGNKLQQAERQRQLNRAMEDVRIWMNETEAVLGLEDTGRDLAGVKFLTKKHQLLESDIEM 790
Query: 69 HA 64
HA
Sbjct: 791 HA 792
Score = 70.9 bits (166), Expect = 7e-13
Identities = 30/74 (40%), Positives = 49/74 (66%)
Frame = -3
Query: 267 GAVFELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALL 88
G + + K +L+EA Q+Q + R V +++ W+ EVE L SEDYGKD+ SV NL K+H L
Sbjct: 1884 GDLSDNKAQRLKEAIQKQTFERNVIELQAWIEEVENALASEDYGKDMRSVNNLIKRHQSL 1943
Query: 87 EADVSSHAERIDAI 46
+ D++ + +R+ +
Sbjct: 1944 QMDIARYEDRVSEL 1957
Score = 70.5 bits (165), Expect = 1e-12
Identities = 31/73 (42%), Positives = 48/73 (65%)
Frame = -1
Query: 470 ATDDSYLDPTNLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEE 291
ATD+S+ DP NL K+QKHQ FE EL A++ +D + G++L+ HFA ++ R+E
Sbjct: 1337 ATDESFKDPINLESKLQKHQAFESELTAHERAIDSVRDKGEQLISCGHFAASEVEVRIEA 1396
Query: 290 LGGIWERLVQSSS 252
L WE L+++S+
Sbjct: 1397 LYIQWEELLEASA 1409
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = -1
Query: 485 ES*KFATDDSYLDPTNLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQIS 306
E + A + SY + TNL K+QKHQ FE E+ A+K +D IT G+ L+ Q +
Sbjct: 1811 EKLQIAAEASYREATNLQQKLQKHQTFEAEVSAHKSELDAITQTGQSLMRNSPSCQETVE 1870
Query: 305 SRVEELGGIWERL 267
SR+++L +W L
Sbjct: 1871 SRLKDLADLWSLL 1883
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/68 (38%), Positives = 41/68 (60%)
Frame = -3
Query: 249 KGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSS 70
KG KLQEA QQ+N+ V+ + +++ E +LS DYG+D LQ+K + D++
Sbjct: 1411 KGRKLQEARDHQQFNQEVDIADSCITDKETIVLSSDYGRDFEHCVRLQRKMKEFDQDLAV 1470
Query: 69 HAERIDAI 46
A R++AI
Sbjct: 1471 DAARVEAI 1478
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Frame = -1
Query: 488 RES*KFATDDSYLDPTNLNGKVQKHQNFEQELQANKPRVDEITAV--GKRLL--ELEHFA 321
+E + A D+S+ DP NL G +Q+HQ FE E+ ANK +D I V G L+ + ++
Sbjct: 624 KEKSQIAEDESFKDPKNLQGNLQRHQAFEAEITANKDGIDRINKVRFGSTLVVGYVGGWS 683
Query: 320 QPQ-ISSRVEELG 285
+P IS+R+ + G
Sbjct: 684 KPSYISNRIHKAG 696
Score = 48.8 bits (111), Expect = 3e-06
Identities = 21/70 (30%), Positives = 38/70 (54%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAE 61
+L ++ Q+Y + + W+++ G S+DYGKD S + L +H L+ DV++ +
Sbjct: 946 RLHDSFLSQKYLSEANEADSWMNDKAGLAASQDYGKDGASAETLLTRHKALQVDVAAFST 1005
Query: 60 RIDAIREPGR 31
ID + E R
Sbjct: 1006 TIDELAEEAR 1015
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = -3
Query: 255 ELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADV 76
+ + KLQ + QY V +++ W+SE + S DYG+D TS + L +KH L+ ++
Sbjct: 2177 QTRNEKLQASLATHQYYDQVFEMDAWVSEKLSLVSSTDYGRDETSAETLLRKHDALQLEL 2236
Query: 75 SSHAERIDAIR 43
++ +I +R
Sbjct: 2237 DANESKIRDLR 2247
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/74 (31%), Positives = 45/74 (60%)
Frame = -3
Query: 249 KGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSS 70
+ KL E+ Q+ R +++E W++E + Q+ +E ++ T++Q +KH EA+VS+
Sbjct: 1785 RSGKLGESKLLFQFLRDAKELESWMNE-KLQIAAEASYREATNLQQKLQKHQTFEAEVSA 1843
Query: 69 HAERIDAIREPGRA 28
H +DAI + G++
Sbjct: 1844 HKSELDAITQTGQS 1857
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = -3
Query: 267 GAVFELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALL 88
GA + +LQ + Q++ R + +E WL+ E LLSED G L +V+ L KK
Sbjct: 2600 GASLRTRTQQLQHNKEIQRFKREADQLEAWLNAREHDLLSEDVGDSLEAVEELLKKQDEF 2659
Query: 87 EADVSSHAERIDAI 46
E + + E+ +++
Sbjct: 2660 EKMLLTQGEKFNSL 2673
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = -3
Query: 237 LQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAER 58
L++A Q+ +E W+ E Q S D G L SVQ LQK+H E ++++H R
Sbjct: 841 LEDAFALHQFIYDIEVEMTWVREHLQQASSGDLGTSLISVQRLQKRHLAFENELTNHQTR 900
Query: 57 IDAIREPGR 31
ID + G+
Sbjct: 901 IDTVLSSGQ 909
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIEL-WLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHA 64
+LQ++ Q+ A +E+ W+ + E SEDYG++L VQ+L KK LE++++SH
Sbjct: 2076 RLQDSLALHQF-LADTQVEVDWIKDKEPIAKSEDYGRNLLGVQSLMKKMEGLESEINSHE 2134
Query: 63 ERIDAIREPG 34
+ A+ E G
Sbjct: 2135 LLVQALLETG 2144
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/60 (35%), Positives = 34/60 (56%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAE 61
+L E+ + +Y R VE+I ++SE SEDYG D +Q +Q + + V+S+AE
Sbjct: 1052 RLTESKKLHEYRREVEEISAYVSEQLQTAASEDYGTDFEHLQVIQGRFGDFQRSVASYAE 1111
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/60 (30%), Positives = 36/60 (60%)
Frame = -1
Query: 422 QKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWERLVQSSS*RE 243
++H FE EL ++ R+D + + G+ L++ + A ++ R EEL +W+ LV ++ R+
Sbjct: 885 KRHLAFENELTNHQTRIDTVLSSGQDLIDSCYSATDKVEERCEELQNLWDELVDMAAQRK 944
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/77 (25%), Positives = 45/77 (58%)
Frame = -3
Query: 264 AVFELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLE 85
A + + KLQ + + Q+ + V + E W+ E + Q +++ KD ++++ +KH E
Sbjct: 1301 AELDKRREKLQNSHKIMQFYQDVVESESWIME-KLQTATDESFKDPINLESKLQKHQAFE 1359
Query: 84 ADVSSHAERIDAIREPG 34
+++++H ID++R+ G
Sbjct: 1360 SELTAHERAIDSVRDKG 1376
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAE 61
+L ++++ + R +++ W+ E E + S+D G+DL V+ L +K + D+ S E
Sbjct: 2288 RLLDSSRLFNFLREADELGAWVEEKEAIVSSDDCGRDLEHVEMLMQKFEVFTRDLVSSGE 2347
Query: 60 RIDAIRE 40
RI + E
Sbjct: 2348 RIAKLTE 2354
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/72 (23%), Positives = 37/72 (51%)
Frame = -3
Query: 255 ELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADV 76
E++ LQ+A + + ED++LW+S E Q S + L ++Q +++K ++
Sbjct: 176 EMRRLSLQKAIKYYHFCHECEDMDLWMSNKERQFKSIESQNTLDAIQTVRQKLERFATEI 235
Query: 75 SSHAERIDAIRE 40
++ R+ I +
Sbjct: 236 ATKCSRVSDINQ 247
Score = 35.5 bits (78), Expect = 0.033
Identities = 14/61 (22%), Positives = 33/61 (54%)
Frame = -1
Query: 470 ATDDSYLDPTNLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEE 291
A++D D ++N +++HQ+ + ++ + RV E+ + EHF + +I+ R +
Sbjct: 1922 ASEDYGKDMRSVNNLIKRHQSLQMDIARYEDRVSELLKQAGEFVAAEHFLKDEIADRAAD 1981
Query: 290 L 288
+
Sbjct: 1982 V 1982
Score = 34.7 bits (76), Expect = 0.058
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -1
Query: 440 NLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWERL 267
N+ ++ H NFE+ L + + + + K+ L+++H+ I S+ E+ WE L
Sbjct: 1721 NVESLLKSHINFEKSLSTYEENIRSLESSAKQFLQVKHYHAEAIRSKYLEILDKWEAL 1778
Score = 33.9 bits (74), Expect = 0.10
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEAD 79
KL EA + +NR D+ ++E S + G+DL +V+ L +KH +E +
Sbjct: 1520 KLAEACEIHAFNRNCRDVSSMINEKAAVQTSGEVGRDLPAVEALIRKHDDVERE 1573
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/61 (24%), Positives = 30/61 (49%)
Frame = -1
Query: 470 ATDDSYLDPTNLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEE 291
A+ D D + + +H+ + ++ A +DE+ +RL++ HF +ISS +
Sbjct: 975 ASQDYGKDGASAETLLTRHKALQVDVAAFSTTIDELAEEARRLVQSSHFDSEKISSTQRD 1034
Query: 290 L 288
L
Sbjct: 1035 L 1035
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = -3
Query: 237 LQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAER 58
LQ++ Q + E E W+ + S + + L +V++L K H E +S++ E
Sbjct: 1683 LQQSTDLQMFLADAEKAENWIKNKQMVAQSIESRESLDNVESLLKSHINFEKSLSTYEEN 1742
Query: 57 IDAIREPGR 31
I ++ +
Sbjct: 1743 IRSLESSAK 1751
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/53 (24%), Positives = 30/53 (56%)
Frame = -1
Query: 425 VQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWERL 267
++K + E E+ +++ V + G++L+ H+A+ I ++ + L +WE L
Sbjct: 2120 MKKMEGLESEINSHELLVQALLETGEQLVLRGHYAERDIGAKSQMLLELWEEL 2172
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -3
Query: 195 EDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHAL 91
E++ W+ E + L E+ GKD+ +V+ ++H +
Sbjct: 317 EEMRSWIQEKDAALCKEELGKDIETVRAQLRRHQM 351
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/71 (23%), Positives = 39/71 (54%)
Frame = -1
Query: 425 VQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWERLVQSSS*R 246
++KH+N E+ + + + ++ + +GK L++ +H I +R L G+ +R + +
Sbjct: 1247 LKKHENTEKLVLSQEEKLSALQVLGKELIDNQHNQSDMIRNR---LSGVCDRREKLKAEL 1303
Query: 245 ETSCRKRLNNS 213
+ R++L NS
Sbjct: 1304 DKR-REKLQNS 1313
>SB_7706| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 686
Score = 68.1 bits (159), Expect = 5e-12
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 9/72 (12%)
Frame = -3
Query: 249 KGNKLQEAAQQQQYNRAVEDIELWLSE---------VEGQLLSEDYGKDLTSVQNLQKKH 97
K L+E+ QQQQ+N ++D++ WL E VE L S+D+G+DL SVQNL KKH
Sbjct: 189 KTQHLKESNQQQQFNTNIKDLDFWLGECTNYVWRTQVEASLSSDDFGRDLASVQNLIKKH 248
Query: 96 ALLEADVSSHAE 61
L+EAD+++H +
Sbjct: 249 QLVEADIAAHED 260
Score = 68.1 bits (159), Expect = 5e-12
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = -3
Query: 333 RTFCSTSNIVSRGR-AGRNMGATGAVFELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQ 157
R S N++ + + ++ A + + +KL E+ + R V+D E W+ E +
Sbjct: 236 RDLASVQNLIKKHQLVEADIAAHEDMAANRSDKLAESNALHTFYRDVDDEESWIKEKKLL 295
Query: 156 LLSEDYGKDLTSVQNLQKKHALLEADVSSHAERIDAIREPG 34
SEDYGKDL+ V+NL+KKH LEA++++H RI A+ E G
Sbjct: 296 TSSEDYGKDLSGVENLRKKHQRLEAEINNHEPRIAAVTECG 336
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Frame = -1
Query: 464 DDSYLDPTNLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFA--QPQISSRVEE 291
D+SY DPTNL K QKHQ FE E++ANK RV E +G+ L+E A +P + R+
Sbjct: 115 DESYKDPTNLQSKFQKHQAFEAEVEANKERVLETVNLGEGLIEQNKCAGSEPVVRERITR 174
Query: 290 LGGIWERLVQSSS 252
+ WE LV SS
Sbjct: 175 ITTQWELLVTKSS 187
Score = 54.4 bits (125), Expect = 7e-08
Identities = 27/63 (42%), Positives = 42/63 (66%)
Frame = -3
Query: 243 NKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHA 64
+KL E+ QQ++R EDIE+W+SE +L E Y KD T++Q+ +KH EA+V ++
Sbjct: 84 SKLGESKTIQQFSRDAEDIEVWISEKMQTVLDESY-KDPTNLQSKFQKHQAFEAEVEANK 142
Query: 63 ERI 55
ER+
Sbjct: 143 ERV 145
Score = 54.0 bits (124), Expect = 9e-08
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = -3
Query: 255 ELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADV 76
+ + +KL ++ QQ+ V++ W++E + S+DYG L +VQ L KKH E D+
Sbjct: 369 DARQHKLDDSLAYQQFGANVDEEISWINEKNTLVGSDDYGDTLAAVQGLLKKHEAFETDL 428
Query: 75 SSHAERIDAIREPG 34
H ER++ I G
Sbjct: 429 EVHRERVNDIENAG 442
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSS 70
KL + + Q+N + +E W+ + EG SE+ G+DL+SVQ L K +A + +
Sbjct: 480 KLNDNSAFLQFNWKADVVESWIGDKEGIARSEELGRDLSSVQTLMTKQETFDAGLQA 536
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = -1
Query: 470 ATDDSYLDPTNLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEE 291
+++D D + + +KHQ E E+ ++PR+ +T G + +E H +I +RV+
Sbjct: 297 SSEDYGKDLSGVENLRKKHQRLEAEINNHEPRIAAVTECGNKFVEEGHGNADEIKARVDG 356
Query: 290 LGGIWERL 267
L W+ L
Sbjct: 357 LQEKWDEL 364
Score = 32.3 bits (70), Expect = 0.31
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = -1
Query: 425 VQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWERLVQS 258
++KH++F + L + ++ ++ L+ +H+ P I+ R+ + W L Q+
Sbjct: 23 IKKHEDFTRALTVQEEKIGKLKENADTLIAADHYDSPVIAERIAAVLARWATLKQA 78
>SB_42689| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1317
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/77 (38%), Positives = 49/77 (63%)
Frame = -1
Query: 485 ES*KFATDDSYLDPTNLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQIS 306
E + A+++SY D +N+ GKV KH+ FE ELQANK R+D+I+ G+ L + + +P+I
Sbjct: 358 EKHQVASEESYRDLSNIQGKVMKHEAFEAELQANKERLDQISESGRDLADEKPENKPEID 417
Query: 305 SRVEELGGIWERLVQSS 255
+++L W L + S
Sbjct: 418 ELLQKLDQKWLELAEVS 434
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = -3
Query: 249 KGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSS 70
KG +L +A Q Q++R V+D E W++E E L S +YG +L VQ LQKKH L A++
Sbjct: 543 KGAELDQAMQFFQFDRDVDDEETWINEKEPLLQSTNYGNNLFEVQKLQKKHQTLCAEIDI 602
Query: 69 HAERIDAIREPG 34
H + + I G
Sbjct: 603 HQKHKERICNQG 614
Score = 55.2 bits (127), Expect = 4e-08
Identities = 21/65 (32%), Positives = 44/65 (67%)
Frame = -3
Query: 249 KGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSS 70
KG+KL++A +Q+++N V+ ++ W+ E+E +++++ DLT+ L +KH LE +++
Sbjct: 437 KGSKLKDAQRQEEFNAGVQTMQEWVKELETVIITQEKATDLTTATRLYQKHKQLEKQINA 496
Query: 69 HAERI 55
ER+
Sbjct: 497 KKERL 501
Score = 54.8 bits (126), Expect = 5e-08
Identities = 27/70 (38%), Positives = 46/70 (65%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAE 61
+L++A Q QQ+ + ED+ WL+E + Q+ SE+ +DL+++Q KH EA++ ++ E
Sbjct: 335 RLRDALQLQQFIQDAEDMYDWLNE-KHQVASEESYRDLSNIQGKVMKHEAFEAELQANKE 393
Query: 60 RIDAIREPGR 31
R+D I E GR
Sbjct: 394 RLDQISESGR 403
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/67 (31%), Positives = 38/67 (56%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAE 61
+L + Q +QY + E W+SE E ++ ++ GKD S + K+H LEA ++ +AE
Sbjct: 652 QLDLSLQAKQYYFDAAEAESWMSEQELNMMGDERGKDEASATEMLKRHETLEAAIADYAE 711
Query: 60 RIDAIRE 40
++ + E
Sbjct: 712 TVNELGE 718
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = -3
Query: 261 VFELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEA 82
+ E + L+ A + +Y +++ + E + L++E+ G+DL SVQ LQ+ H EA
Sbjct: 858 LIETRTKMLEAALELHKYYHDAKEVLAMIQEKDN-LMTEELGRDLNSVQQLQRTHQSFEA 916
Query: 81 DVSSHAERIDAIRE 40
D++ ++ I+E
Sbjct: 917 DLAPLGHQVSGIQE 930
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = -3
Query: 255 ELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKK 100
E + KL E + Q NR V+D+ELW+++ E S+D G+DL + L +K
Sbjct: 753 EERRGKLDETLKLYQLNREVDDLELWIADKEQVAGSQDIGQDLAHCELLIEK 804
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/70 (22%), Positives = 36/70 (51%)
Frame = -3
Query: 243 NKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHA 64
+KL +A ++ AV+D LW++++ +L+ + KD++ V+ L +H ++
Sbjct: 970 DKLHDADDLYRFLIAVQDQMLWMNDMLKHILTYEKAKDVSGVEVLMDQHQSRHVEIEGRE 1029
Query: 63 ERIDAIREPG 34
E + + G
Sbjct: 1030 ESFFGVIKMG 1039
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -1
Query: 467 TDDSYLDPTNLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHF 324
T + D T QKH+ E+++ A K R+ E+ A +++ HF
Sbjct: 470 TQEKATDLTTATRLYQKHKQLEKQINAKKERLKELDAQAADMVDAGHF 517
Score = 31.5 bits (68), Expect = 0.54
Identities = 10/46 (21%), Positives = 26/46 (56%)
Frame = -1
Query: 425 VQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEEL 288
++KH+ F + + +++++ +RL H+AQ +I+ + + L
Sbjct: 273 IKKHEEFSKRMDVQDEKINQMIQFAQRLANDGHYAQDKITEKAQNL 318
>SB_29386| Best HMM Match : Spectrin (HMM E-Value=1.9e-29)
Length = 181
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = -3
Query: 255 ELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADV 76
E + + L A + Q+++R +D + W+SE + L S DYG+DL SVQ LQ+KH +LE D+
Sbjct: 116 EQRKDNLDSAQEIQKFHRDADDTKAWISEKDTALSSSDYGRDLASVQALQRKHDVLERDL 175
Query: 75 SSHAER 58
++ E+
Sbjct: 176 AALEEK 181
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/67 (29%), Positives = 38/67 (56%)
Frame = -3
Query: 255 ELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADV 76
E + KL+++ + R ++E W+++ E + SE+ GKD V+ +QKK + D+
Sbjct: 10 EERRKKLEDSIHRYTLLREAHELESWINDKEAIVTSEEVGKDFEHVEAMQKKFDDFQKDM 69
Query: 75 SSHAERI 55
S++ RI
Sbjct: 70 SANEVRI 76
>SB_50472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 49
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = -3
Query: 195 EDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAER 58
+D + W+SE + L S DYG+DL SVQ LQ+KH +LE D+++ E+
Sbjct: 4 DDTKAWISEKDTALSSSDYGRDLASVQALQRKHDVLERDLAALEEK 49
>SB_33210| Best HMM Match : Spectrin (HMM E-Value=1.3e-12)
Length = 186
Score = 48.8 bits (111), Expect = 3e-06
Identities = 21/53 (39%), Positives = 37/53 (69%)
Frame = -3
Query: 186 ELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAERIDAIREPGRA 28
+L + +++ LLSEDYGK L V++L +KH+L+EAD+++ A+R+ + A
Sbjct: 125 KLNMPDLQIGLLSEDYGKHLLGVEDLLQKHSLVEADIAAQADRVKTVNAQAEA 177
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = -3
Query: 186 ELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAERIDAI 46
E WL+E + + +++G DL +V+ KKH +E D+ ++ ER++AI
Sbjct: 3 ETWLNENQRLVAVDNFGNDLAAVEAATKKHEAIETDIMAYEERVNAI 49
>SB_15107| Best HMM Match : Spectrin (HMM E-Value=1.8e-13)
Length = 143
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = -3
Query: 243 NKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEAD 79
+KL E+ QQ++R EDIE+W+SE +L E Y KD T++Q+ +KH EA+
Sbjct: 90 SKLGESKTIQQFSRDAEDIEVWISEKMQTVLDESY-KDPTNLQSKFQKHQAFEAE 143
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -1
Query: 464 DDSYLDPTNLNGKVQKHQNFEQE 396
D+SY DPTNL K QKHQ FE E
Sbjct: 121 DESYKDPTNLQSKFQKHQAFEAE 143
Score = 32.3 bits (70), Expect = 0.31
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = -1
Query: 425 VQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWERLVQS 258
++KH++F + L + ++ ++ L+ +H+ P I+ R+ + W L Q+
Sbjct: 29 IKKHEDFTRALTVQEEKIGKLKENADTLIAADHYDSPVIAERIAAVLARWATLKQA 84
>SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = -1
Query: 461 DSYLDPT--NLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEEL 288
D Y D T ++N ++KH+ FE +L A++ RVD+I A+ + L LE+ ++++R + +
Sbjct: 256 DDYSDATLADINALMKKHEAFESDLAAHQDRVDQIVAIAQELNALEYSKIDEVNARCQNI 315
Query: 287 GGIWERL 267
W+ L
Sbjct: 316 CDDWKDL 322
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 186 ELWLSEVEGQLLSEDYGK-DLTSVQNLQKKHALLEADVSSHAERIDAI 46
E W + + L +DY L + L KKH E+D+++H +R+D I
Sbjct: 243 ESWTNGKDAVLSKDDYSDATLADINALMKKHEAFESDLAAHQDRVDQI 290
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/59 (22%), Positives = 29/59 (49%)
Frame = -1
Query: 440 NLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWERLV 264
+L +Q Q+ E + + KP ++E+ + + + + F P +E + WE+L+
Sbjct: 431 SLEKNLQVLQDLETFITSYKPNIEELEVINQEVQQALIFENPHTKYTMEAMRVGWEQLL 489
>SB_59804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = -3
Query: 255 ELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADV 76
E + N L Q R ++ + ++E L SEDYG+ L VQN+ KH+L+E+ +
Sbjct: 389 EARRNTLTGFTQLVGVFRDMDSAHADMLDIEAGLRSEDYGRHLLDVQNMLDKHSLVESQI 448
Query: 75 SSHAERIDAI 46
S ER AI
Sbjct: 449 QSQHERTLAI 458
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/71 (25%), Positives = 41/71 (57%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAE 61
+L+++ + + VE+ ++++ E + S++ G+DL S+ LQ++H LEA+++
Sbjct: 500 RLEDSLELYTFFEDVEEEDIFIKETDKLAASKEVGRDLASLTRLQQRHEALEAEINGRFS 559
Query: 60 RIDAIREPGRA 28
+ I G+A
Sbjct: 560 HCEGIIAKGQA 570
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKD 130
+L++AAQ QY D E W+ E + SEDYG+D
Sbjct: 606 RLKDAAQSLQYYSDANDAESWMKEKMFVVCSEDYGRD 642
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/80 (25%), Positives = 41/80 (51%)
Frame = -1
Query: 449 DPTNLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWER 270
D +L Q+H+ E E+ + I A G+ L++ HF +I +++++L W +
Sbjct: 536 DLASLTRLQQRHEALEAEINGRFSHCEGIIAKGQALIDKGHFGAKEIKAKIKQLQANWIK 595
Query: 269 LVQSSS*RETSCRKRLNNSS 210
L + + R R+RL +++
Sbjct: 596 LKELAGTR----RERLKDAA 611
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = -3
Query: 216 QQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAERIDAI 46
+++ R + E WL ++ + E G+D +V+ K+H + DV + ER +
Sbjct: 296 EKFQRKADLRESWLDDMVQVIDDELLGQDAATVEAALKRHEAISTDVKAREERFQMV 352
>SB_38289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/69 (27%), Positives = 39/69 (56%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAE 61
+L+E+ + Q + R ++ E+W++E + + S DYG DL + L KH +E ++++
Sbjct: 406 RLEESLKLQSFYRNADEEEMWVTEKDYFVQSTDYGHDLNTAMILLTKHEAVEREMTARNA 465
Query: 60 RIDAIREPG 34
+ A+ G
Sbjct: 466 QTKAVARNG 474
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = -1
Query: 419 KHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWERLVQSSS*RET 240
KH+ E+E+ A + + G+ LLE +A I +R++ + W++L +++ R+
Sbjct: 452 KHEAVEREMTARNAQTKAVARNGEELLEAVPYATDTIQNRLDTIRSKWDKLHDNAAYRKK 511
Query: 239 SCRKRL 222
++ L
Sbjct: 512 KIQENL 517
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKH 97
K+QE + QQ+ DI W +E + ++D G D S + L KKH
Sbjct: 512 KIQENLKLQQFIAEYNDIMSWCDMMERIVANDDLGYDEHSAEVLVKKH 559
>SB_5418| Best HMM Match : Spectrin (HMM E-Value=1.50001e-40)
Length = 514
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = -3
Query: 249 KGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLS-EDYGKDLTSVQNLQKKHALLEADVS 73
+G ++ +QY++ E I +WL E+E +L G +L +VQ K H A+++
Sbjct: 79 RGELVEVKVTSEQYHKLFEVILVWLDELELKLSEVPPVGTELATVQEQLKLHKAFHAELT 138
Query: 72 SHAERIDAIREPG 34
H I I + G
Sbjct: 139 PHQSEITQINQLG 151
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/72 (23%), Positives = 37/72 (51%)
Frame = -1
Query: 428 KVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWERLVQSSS* 249
++ KH+ + ++ +++P VD ++ LLE + +V+EL W+ ++ S+
Sbjct: 237 ELAKHKILQNDILSHEPSVDSLSRAASALLESGETDSTALEGKVQELKTTWDAVLAKSAQ 296
Query: 248 RETSCRKRLNNS 213
R+ K L +S
Sbjct: 297 RQAELEKALKDS 308
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/72 (23%), Positives = 37/72 (51%)
Frame = -1
Query: 428 KVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWERLVQSSS* 249
++ KH+ + ++ +++P VD ++ LLE + +V+EL W+ ++ S+
Sbjct: 5083 ELAKHKILQNDILSHEPSVDSLSRAASALLESGETDSTALEGKVQELKTTWDAVLAKSAQ 5142
Query: 248 RETSCRKRLNNS 213
R+ K L +S
Sbjct: 5143 RQAELEKALKDS 5154
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -3
Query: 249 KGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLS-EDYGKDLTSVQNLQKKHALLEADVS 73
+G ++ +QY++ I +WL E+E +L G +L +VQ K H A+++
Sbjct: 4925 RGELVEVKVTSEQYHKLFVVILVWLDELELKLSEVPPVGTELATVQEQLKLHKAFHAELT 4984
Query: 72 SHAERIDAIREPG 34
H I I + G
Sbjct: 4985 PHQSEITQINQLG 4997
Score = 35.1 bits (77), Expect = 0.044
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = -1
Query: 452 LDPTNLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLE--LEHFAQPQISSRVEELGGI 279
+DP +L +++KH+ F+ L AN+ +D +GK+L++ L+ A I ++ +L
Sbjct: 5540 VDPAHLRTQLKKHKEFQTMLGANQAGLDATVKMGKQLMDRSLDEDA-ITIEGKIADLKAR 5598
Query: 278 WERLVQSSS*RETSCRKRL 222
W+ + S R+ + L
Sbjct: 5599 WDAVCGLSVERQQKLEEAL 5617
Score = 34.7 bits (76), Expect = 0.058
Identities = 21/97 (21%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = -3
Query: 288 GRNMGATGAVFELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSED-YGKDLTSVQN 112
GR A + + K N + +Q+N +E+++ W+ EV+ ++ + + +V+
Sbjct: 2214 GRYNDALAQLMDRKYNLENDVTNARQFNATLEELDNWIPEVKERVAKQQPISTEPETVRK 2273
Query: 111 LQKKHALLEADVSSHAERIDAIREPGR--ASS*KREP 7
++ LL+ D++ H ++ G+ SS K +P
Sbjct: 2274 QLEEAQLLKDDIAKHNAILEMAENAGQQLISSSKHDP 2310
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -1
Query: 449 DPTNLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQ--ISSRVEELGGIW 276
D L + +H+ +QE+ N+P + G+ L E A+ Q + +V ++ W
Sbjct: 3660 DLDTLKYQKTEHEPMQQEILNNEPSYAALMKAGESLKEASQSAEEQDNLDEKVADISRRW 3719
Query: 275 ERLVQSSS*RET 240
+ L S+ R +
Sbjct: 3720 DELKSKSNERSS 3731
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = -3
Query: 255 ELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSED-YGKDLTSVQNLQKKHALLEAD 79
ELK +E A +++ A+ +E WL +V+ + ++ D +V+ ++ + D
Sbjct: 2665 ELKDKVDEEVAMSDKFHDALSALEEWLPKVQEAVSNQQPISGDPETVKKQLQEAENIRDD 2724
Query: 78 VSSHAERIDAIREPGR 31
++ + +D + + GR
Sbjct: 2725 INKYRGLLDKLEDTGR 2740
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -3
Query: 213 QYNRAVEDIELWLSEVEGQLLS-EDYGKDLTSVQNLQKKHALLEADVSSHAERIDAIREP 37
+YN AV+ + WL E E QL + E D ++ N + + D+ D E
Sbjct: 3303 KYNEAVKTLVPWLEETEAQLAAMEPITPDTMALDNRAEVLEDIRKDIDRQKATRDTTEEK 3362
Query: 36 GRA 28
+A
Sbjct: 3363 SKA 3365
>SB_53744| Best HMM Match : Spectrin (HMM E-Value=1.8e-28)
Length = 140
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = -1
Query: 470 ATDDSYLDPTNLNGKVQKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEE 291
++D+ D + + +HQ + E+ A G+ LLE EH+A I ++E
Sbjct: 55 SSDELAKDVASAEALIDRHQEYRAEIDARDSTFQAFDDFGRELLEKEHYASSDIQEKLEN 114
Query: 290 L 288
L
Sbjct: 115 L 115
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAE 61
KL ++ Q++ D+ W+ ++ + S++ KD+ S + L +H A++ +
Sbjct: 26 KLLDSYDYQRFLNEFRDLISWIHGIKALVSSDELAKDVASAEALIDRHQEYRAEIDARDS 85
Query: 60 RIDAIREPGR 31
A + GR
Sbjct: 86 TFQAFDDFGR 95
>SB_7010| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 579
Score = 35.1 bits (77), Expect = 0.044
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = -3
Query: 300 RGRAGRNMGATGAVFELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTS 121
+GR R G + + K KL Q + + DI ++E + LLSEDYGKD
Sbjct: 442 KGRILRLWGGLQDMIKRKKEKLMRCMQLSILLQGMTDIIDSINETKVVLLSEDYGKDHVE 501
Query: 120 VQNLQKKHALLEA 82
QN+ + ++A
Sbjct: 502 GQNIVEGEITVKA 514
>SB_32817| Best HMM Match : Spectrin (HMM E-Value=3.7e-21)
Length = 217
Score = 34.7 bits (76), Expect = 0.058
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = -3
Query: 240 KLQEAAQQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVS 73
KL EA + +NR D+ ++E S + G+DL +V+ L +KH +E +++
Sbjct: 60 KLAEACEIHAFNRNCRDVSSMINEKAAVQTSGEVGRDLPAVEALIRKHDDVERELT 115
>SB_48318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1243
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + NQAEP+
Sbjct: 515 RVNRRSRRPQRQPQQRSPQAPTVHANQAEPI 545
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + NQAEP+
Sbjct: 297 RVNRRSRRPQRQPQQRSPQAPTVHANQAEPI 327
>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
Length = 812
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + NQAEP+
Sbjct: 297 RVNRRSRRPQRQPQQRSPQAPTVHANQAEPI 327
>SB_19685| Best HMM Match : Retrotrans_gag (HMM E-Value=0.061)
Length = 335
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + NQAEP+
Sbjct: 297 RVNRRSRRPQRQPQQRSPQAPTVHANQAEPI 327
>SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 257 KTAPVAPIFRPALPRETIFEVEQNVRAQADACRRPLSRRREACWPAA 397
+T+ P+ R R+ + + NVR A CRRP S+ WP A
Sbjct: 395 ETSGPPPLKRRTGRRQKLVCAQSNVREAASLCRRPGSKSPYLYWPVA 441
>SB_32265| Best HMM Match : Bim_N (HMM E-Value=1.5)
Length = 235
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + NQAEP+
Sbjct: 54 RVNRRSRRPQRQPQQRSPQAPTVHVNQAEPI 84
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RR+ R R R+P A T + NQAEP+
Sbjct: 275 RVNRRARRPQRQPQQRSPQAPTVHANQAEPI 305
>SB_42397| Best HMM Match : rve (HMM E-Value=0.0007)
Length = 729
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + QAEP+
Sbjct: 297 RVNRRSRRSHRQPQQRSPQAPTVHATQAEPI 327
>SB_11337| Best HMM Match : Bim_N (HMM E-Value=0.45)
Length = 286
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + QAEP+
Sbjct: 28 RVNRRSRRSQRQPQQRSPQAPTVHATQAEPI 58
>SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
Length = 1155
Score = 31.1 bits (67), Expect = 0.72
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + QAEP+
Sbjct: 28 RVNRRSRRSQRQPQQRSPQAPTVHATQAEPI 58
>SB_37908| Best HMM Match : Retrotrans_gag (HMM E-Value=0.067)
Length = 449
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + QAEP+
Sbjct: 297 RVNRRSRRPQRQPQQRSPQAPTVHATQAEPI 327
>SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + QAEP+
Sbjct: 267 RVNRRSRRPQRQPQQRSPQAPTVHATQAEPI 297
>SB_1237| Best HMM Match : rve (HMM E-Value=0.00029)
Length = 1026
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + QAEP+
Sbjct: 54 RVNRRSRRPQRQPQQRSPQAPTVHATQAEPI 84
>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
Length = 1253
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + QAEP+
Sbjct: 297 RVNRRSRRPQRQPQQRSPQAPTVHATQAEPI 327
>SB_29927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 820
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + QAEP+
Sbjct: 122 RVNRRSRRPQRQPQQRSPQAPTVHATQAEPI 152
>SB_27036| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
Length = 1059
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + QAEP+
Sbjct: 229 RVNRRSRRPQRQPQQRSPQAPTVHATQAEPI 259
>SB_10546| Best HMM Match : Bim_N (HMM E-Value=0.83)
Length = 335
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + QAEP+
Sbjct: 154 RVNRRSRRPQRQPQQRSPQAPTVHATQAEPI 184
>SB_59115| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 1457
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -3
Query: 216 QQYNRAVEDIELWLSEVEGQLLSE-DYGKDLTSVQNLQKKHALLEADVSSHAERIDAIRE 40
+ YN ++++ WL E E +L ++ D D+ V++ H +++SH + + E
Sbjct: 479 EDYNAQLQEVLTWLREAETKLSNQADISTDVDVVKDQFHDHEDFMMELTSHQASVGGVLE 538
Query: 39 PG 34
G
Sbjct: 539 FG 540
>SB_54885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2988
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = -2
Query: 424 CRNIRTSNRSCRPTSLASTR*RPSASVCLSSNILLNLKYRLAWKSWAEY 278
CR+ T ++ C P S ST+ P SVCL S K W Y
Sbjct: 97 CRSNCTRSKQCFPLSRDSTKGSPYDSVCLYSTHCHRNTSMACSKGWQTY 145
>SB_22904| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.03)
Length = 294
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -3
Query: 195 EDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKH 97
E++ W+ E + L E+ GKD+ +V+ ++H
Sbjct: 53 EEMRSWIQEKDAALCKEELGKDIETVRAQLRRH 85
>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3306
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = -3
Query: 222 QQQQYNRAVEDIELWLSEVEGQLLSEDYGKDLTSVQNLQKKHALLEADVSSHAER 58
++Q + +A+ED E WL + E + L E+ ++LQ + + +S A++
Sbjct: 678 KRQNFQQALEDFETWLVQTEEKELMEEIELHEPIHKDLQTRGVTAAKEATSRADQ 732
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = -3
Query: 261 VFELKGNKLQEAAQQQQYNRAVEDIELWLSEVEGQLLS 148
V +++ + AA+ QQ++ +ED+ WL ++E +L S
Sbjct: 3047 VVQMRSQIVSHAARYQQFDFVLEDLLQWLLDMEKRLTS 3084
>SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014)
Length = 471
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 113 ISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
++RRS R R R+P A T + QAEP+
Sbjct: 2 VNRRSRRPQRQPQQRSPQAPTVHATQAEPI 31
>SB_45545| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 729
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = -3
Query: 162 GQLLSEDYGKDL--TSVQNLQKKHALLEADVSSHAE---RIDAIREPG 34
G L+ D+ DL ++Q+LQ++H + A +SH E R+ + +PG
Sbjct: 348 GDLMRPDHRLDLRAAALQDLQRRHEAMRAGEASHRELLGRMASSHKPG 395
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 388 PTSLASTR*RPSASVCLSSNILLNLKYR 305
PT + +T +P+ C SS++L NL+++
Sbjct: 2811 PTQMVNTPLKPNTKNCYSSHVLKNLRFK 2838
>SB_35552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -3
Query: 294 RAGRNMGATGAVFELKGNKLQEAAQQQQ----YNRAVEDIELWLSEVEGQLLSEDYGKD 130
RAGR G E + L++ Q+Q Y+ ED E L +G + EDYG+D
Sbjct: 964 RAGREGGGDDYEQEYEEEYLEDGTIQEQDEPYYDDYYEDQET-LGYEDGNFVDEDYGRD 1021
>SB_910| Best HMM Match : Cation_efflux (HMM E-Value=0.056)
Length = 416
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 461 RRWRTFSFLVYPTFSFITIAFRTVDTL*GGLSKESA--GAWFDFF 589
R+WR F+ + TF+ +++ F T++ GG + S+ FD F
Sbjct: 64 RKWRKFAVCLVITFAVVSLLFATLEFALGGDRQSSSVISTGFDTF 108
>SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3
Query: 162 GQLLSEDYGKDL--TSVQNLQKKHALLEADVSSHAE 61
G L+ D+ DL ++Q+LQ++H + A +SH E
Sbjct: 1152 GDLMRPDHRLDLRAAALQDLQRRHEAMRAGEASHRE 1187
>SB_54429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 432 WQGAETSELRTGAAGQQASRR 370
WQG +T++ A GQQ S+R
Sbjct: 276 WQGLQTNQTNLSATGQQQSQR 296
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R P A T + Q EP+
Sbjct: 297 RVNRRSRRPQRQPQQRLPQAPTVHATQEEPI 327
>SB_44676| Best HMM Match : Bim_N (HMM E-Value=0.83)
Length = 253
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 116 RISRRSTRCWRPT*ARTPNASTPYGNQAEPV 24
R++RRS R R R+P A T + QA P+
Sbjct: 174 RVNRRSRRPQRQPQQRSPQAPTVHATQAGPI 204
>SB_41836| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.5e-07)
Length = 1128
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -1
Query: 422 QKHQNFEQELQANKPRVDEITAVGKRLLELEHFAQPQISSRVEELGGIWERLVQSSS 252
Q+ + FE+ L K + ++ + + L L Q +++S+ EE+G + L + S
Sbjct: 178 QEKEMFEEMLLQEKQKSKDLASSEENLQNLNKTLQDELNSKNEEIGKLRPMLTERDS 234
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,982,843
Number of Sequences: 59808
Number of extensions: 365208
Number of successful extensions: 1373
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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