Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0035
(392 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 24 0.62
AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450 ... 22 1.9
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 22 2.5
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 4.4
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 4.4
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 4.4
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 5.8
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 5.8
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 5.8
AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6 prot... 20 7.6
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 20 7.6
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 23.8 bits (49), Expect = 0.62
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = -2
Query: 298 SPSVPYRPSRPDGGASHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVR 119
SP++P+ +R DG ++G +I +G+ Y V HLE ++ R
Sbjct: 131 SPAMPHNLTRHDGSVIKNQGMPTMEAI--ARSGIWENCRAAYED----IVKHLERLREER 184
Query: 118 CRCDK 104
C D+
Sbjct: 185 CDPDR 189
>AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 127
Score = 22.2 bits (45), Expect = 1.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 336 PDPQIPHRTRNRH 374
PD +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 21.8 bits (44), Expect = 2.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 130 KLVRCRCDKMKIKRPAVTANREKQIP 53
K R D+ ++ RPA ANR P
Sbjct: 330 KRPRPNIDRHEVTRPAAPANRGNGFP 355
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.0 bits (42), Expect = 4.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 88 PAVTANREKQIPDCRPGAGTPAPGILPAG 2
P VT N + + C PG+G P+G
Sbjct: 137 PNVTPNCDVKSSVCSPGSGHQDSRTSPSG 165
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.0 bits (42), Expect = 4.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 88 PAVTANREKQIPDCRPGAGTPAPGILPAG 2
P VT N + + C PG+G P+G
Sbjct: 137 PNVTPNCDVKSSVCSPGSGHQDSRTSPSG 165
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.0 bits (42), Expect = 4.4
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -2
Query: 88 PAVTANREKQIPDCRPGAGTPAPGILPAG 2
P VT N + + C PG+G P+G
Sbjct: 137 PNVTPNCDVKSSVCSPGSGHQDSRTSPSG 165
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 20.6 bits (41), Expect = 5.8
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 7/39 (17%)
Frame = +3
Query: 177 TMAPVCARPASQDMMLLAQ-------CFPRSWEAPPSGR 272
T P+ PASQ + + C R W +PP R
Sbjct: 94 TPGPLSQAPASQQSLDASDPDAMGKWCPRREWSSPPDAR 132
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 20.6 bits (41), Expect = 5.8
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 7/39 (17%)
Frame = +3
Query: 177 TMAPVCARPASQDMMLLAQ-------CFPRSWEAPPSGR 272
T P+ PASQ + + C R W +PP R
Sbjct: 250 TPGPLSQAPASQQSLDASDPDAMGKWCPRREWSSPPDAR 288
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 20.6 bits (41), Expect = 5.8
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2
Query: 67 EKQIPDCRPGA 35
E + DCRPGA
Sbjct: 258 EINVDDCRPGA 268
>AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6
protein.
Length = 377
Score = 20.2 bits (40), Expect = 7.6
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSPAIRA 271
++VAAL N + GY A A F ++ RA
Sbjct: 81 QKVAALKKTNPALKALFSLGGYAAGTATFTAVAADATKRA 120
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 20.2 bits (40), Expect = 7.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 219 MLLAQCFPRSWEAPPSGRDGRYG 287
ML AQC S ++PP D G
Sbjct: 39 MLAAQCNKLSNKSPPPLADAAVG 61
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,899
Number of Sequences: 336
Number of extensions: 2024
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8330471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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