Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0035
(392 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 99 1e-21
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 99 1e-21
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 99 1e-21
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 99 1e-21
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 99 1e-21
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 99 1e-21
12_02_1282 + 27528159-27529148,27529549-27529614 98 2e-21
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 98 2e-21
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 98 2e-21
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 97 4e-21
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 48 2e-06
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 44 4e-05
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 38 0.003
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 36 0.009
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 33 0.062
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 32 0.19
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 30 0.58
11_04_0151 + 14135390-14135630,14135723-14136132 29 1.8
11_04_0150 + 14127378-14127612,14127705-14128144 29 1.8
07_01_1123 - 10385215-10385574,10385676-10385810,10386385-103870... 28 2.3
07_01_1122 - 10359014-10359127,10359686-10359769,10360375-10361331 28 2.3
12_02_0626 - 21344530-21344986,21346132-21346469,21347300-213473... 28 3.1
09_01_0066 - 978018-978500,978588-979034,979113-979412,979521-97... 28 3.1
04_01_0332 + 4378111-4378329,4378862-4378997,4379113-4379165,437... 28 3.1
02_04_0366 - 22389591-22390527,22391296-22391429,22391762-223918... 28 3.1
11_06_0545 + 24839536-24843421,24843871-24844310 27 4.1
07_03_1449 - 26608547-26608663,26608864-26608912,26609139-26609194 27 4.1
03_02_0235 + 6644083-6644125,6645218-6645315,6645448-6645498,664... 27 4.1
04_03_1001 - 21609280-21610131 27 5.4
03_01_0273 - 2107778-2108772,2108857-2109043,2109121-2110575,211... 27 5.4
12_01_0498 - 3955300-3955317,3955399-3955503,3955600-3955677,395... 27 7.1
11_01_0419 + 3226224-3226756,3228010-3228169,3228256-3228435,322... 27 7.1
08_01_0552 - 4842417-4842632,4842878-4843378 27 7.1
01_05_0612 - 23652121-23652400,23653031-23654427 27 7.1
08_02_1402 - 26786011-26786128,26786263-26786516,26787505-267877... 26 9.4
08_02_1037 - 23851750-23852132,23852622-23852784 26 9.4
05_05_0017 + 21546434-21546841 26 9.4
04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158 26 9.4
02_05_1214 + 34976814-34979813 26 9.4
01_05_0698 + 24376193-24376708 26 9.4
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 98.7 bits (235), Expect = 1e-21
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI +NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84
Score = 60.1 bits (139), Expect = 6e-10
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
E++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 98.7 bits (235), Expect = 1e-21
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI +NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84
Score = 60.1 bits (139), Expect = 6e-10
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
E++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 98.7 bits (235), Expect = 1e-21
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI +NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84
Score = 60.1 bits (139), Expect = 6e-10
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
E++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 98.7 bits (235), Expect = 1e-21
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI +NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84
Score = 60.1 bits (139), Expect = 6e-10
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
E++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 98.7 bits (235), Expect = 1e-21
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI +NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84
Score = 60.1 bits (139), Expect = 6e-10
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
E++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 98.7 bits (235), Expect = 1e-21
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI +NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM 84
Score = 60.1 bits (139), Expect = 6e-10
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
E++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 98.3 bits (234), Expect = 2e-21
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDM 84
Score = 58.8 bits (136), Expect = 1e-09
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
+++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 98.3 bits (234), Expect = 2e-21
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI NWDDM
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDM 84
Score = 60.1 bits (139), Expect = 6e-10
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
E++ LV DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 40
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 98.3 bits (234), Expect = 2e-21
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI NWDDM
Sbjct: 37 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDM 83
Score = 62.1 bits (144), Expect = 2e-10
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
M +E++ +V DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 39
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 97.1 bits (231), Expect = 4e-21
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRH GVMVGMGQKD+YVGDEAQ+KRGILTLKYPIEHGI NWDDM
Sbjct: 37 GRPRHTGVMVGMGQKDAYVGDEAQAKRGILTLKYPIEHGIVNNWDDM 83
Score = 63.7 bits (148), Expect = 5e-11
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
M DE++ +V DNG+GM KAGFAG DAPRAVFPSIVG P
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP 39
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 48.4 bits (110), Expect = 2e-06
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +2
Query: 152 EEVAALVVDNGSGMCKAGFAGYDAPRAVFPSI 247
+EV+A+V+D GS CKAG+AG D P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
Score = 27.1 bits (57), Expect = 5.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +1
Query: 301 YVGDEAQSKRGILTLKYPIEHGIATNWD 384
YVG E + +R + + P++ G T+WD
Sbjct: 120 YVGQELEFRRDHMEVISPMKDGTVTDWD 147
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 44.0 bits (99), Expect = 4e-05
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = +2
Query: 167 LVVDNGSGMCKAGFAGYDAPRAVFPSIVGSPAIR 268
+V DNG+G K GFAG + P +VFP +VG P +R
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLR 40
Score = 30.7 bits (66), Expect = 0.44
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 295 DSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
D VG R L + YP+ +GI +WDDM
Sbjct: 52 DIVVGAACADLRHQLDVSYPVTNGIVQSWDDM 83
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 37.9 bits (84), Expect = 0.003
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +2
Query: 167 LVVDNGSGMCKAGFAGYDAPRAVFPSIVGSPAIRA*WSVWDR 292
+V+DNG G+ KAGF G P AV P+ + P W V D+
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPPGSKKWLVADQ 49
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 36.3 bits (80), Expect = 0.009
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +1
Query: 283 MGQKDSYVGDEAQS---KRGILTLKYPIEHGIATNWDDM 390
M D ++GDEA S G+ T K+PI HG +WD M
Sbjct: 63 MADLDFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTM 101
Score = 33.1 bits (72), Expect = 0.082
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 164 ALVVDNGSGMCKAGFAGYDAPRAVFPSIV 250
A+V+DNG+G K GF+G P P++V
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVV 36
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 33.5 bits (73), Expect = 0.062
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 164 ALVVDNGSGMCKAGFAGYDAPRAVFPSIV 250
A+V+DNG+G K GFAG P + P++V
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVV 36
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +1
Query: 283 MGQKDSYVGDEAQSKR---GILTLKYPIEHGIATNWDDM 390
M D ++G++A ++ L YPI +G NWD M
Sbjct: 64 MADLDFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTM 102
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 31.9 bits (69), Expect = 0.19
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 167 LVVDNGSGMCKAGFAGYDAPRAVFPSIVGSPAIRA 271
+V+DNG+ + G+AG PR F +IV P R+
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHRS 56
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 30.3 bits (65), Expect = 0.58
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 164 ALVVDNGSGMCKAGFAGYDAP 226
+++VD GSG CK G++ Y AP
Sbjct: 141 SIIVDGGSGYCKYGWSKYAAP 161
>11_04_0151 + 14135390-14135630,14135723-14136132
Length = 216
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 160 CRVGSRQWLRYVQGRLRRI*CSSRSVSLDRGKPRHQ 267
C G R R+ G LR + +R VS+DR P H+
Sbjct: 46 CSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHE 81
>11_04_0150 + 14127378-14127612,14127705-14128144
Length = 224
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 160 CRVGSRQWLRYVQGRLRRI*CSSRSVSLDRGKPRHQ 267
C G R R+ G LR + +R VS+DR P H+
Sbjct: 44 CSYGGRILPRHADGALRYVGGDNRVVSVDRSLPFHE 79
>07_01_1123 -
10385215-10385574,10385676-10385810,10386385-10387091,
10387158-10387455
Length = 499
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 321 LCLISYIRVLLSHTDHHALMAGLPTIEGNTARGA 220
L L+S +V +S T H+++AG P +EG R +
Sbjct: 208 LKLLSLRQVKISETSLHSIIAGCPALEGLLLRNS 241
>07_01_1122 - 10359014-10359127,10359686-10359769,10360375-10361331
Length = 384
Score = 28.3 bits (60), Expect = 2.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 321 LCLISYIRVLLSHTDHHALMAGLPTIEGNTARGA 220
L L+S +V +S T H+++AG P +EG R +
Sbjct: 192 LKLLSLRQVKISETSLHSIIAGCPALEGLLLRNS 225
>12_02_0626 -
21344530-21344986,21346132-21346469,21347300-21347338,
21347572-21347629,21349854-21350136,21350404-21350766,
21350768-21350840
Length = 536
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = -3
Query: 369 DSVFDGVFEGQDTSFALCLISYIRVLLSHTDHHALMAGLPTIEGNTARGASYPAKPALHI 190
D DGV+E D A L+ ++R + L+ LPT G R + P I
Sbjct: 215 DLAEDGVWEVADEVDAFFLVFFLRHRALRNVPNCLLVSLPTQVGTVKRAHNSSCSPMEGI 274
Query: 189 P 187
P
Sbjct: 275 P 275
>09_01_0066 -
978018-978500,978588-979034,979113-979412,979521-979855,
980325-980703
Length = 647
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 286 PYRPSRPDGGASHDRGKHCARSIISCEA 203
P +P+ P GA+ R + C R ++ C A
Sbjct: 60 PTKPASPPTGAALYRARRCRRKLLRCRA 87
>04_01_0332 +
4378111-4378329,4378862-4378997,4379113-4379165,
4379286-4379394,4379467-4379603,4379698-4379894,
4379979-4380128,4380233-4380293,4380380-4380500,
4380901-4380991,4381116-4381209,4381446-4381541,
4382176-4382316,4382592-4382642,4383093-4383161,
4384072-4384142,4384244-4384336,4384820-4384910,
4386164-4386235,4387226-4387351,4387537-4387593,
4387926-4388000,4388570-4388658,4388814-4388891,
4389308-4389446,4389868-4389977,4390151-4390250,
4390548-4390655
Length = 977
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDS--YVGDEAQSKRGILTLKYPIEHGIATNWDD 387
G P QG G+ + + Y G+EA ++R + T I+ G+A N D
Sbjct: 646 GNPLQQGFSTGLFLEPNGYYQGNEADTRRELATYADHIQIGLAGNLKD 693
>02_04_0366 -
22389591-22390527,22391296-22391429,22391762-22391816,
22392364-22393225,22393342-22393459,22393647-22393737,
22394627-22394670
Length = 746
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -2
Query: 193 HTGAIVYYQRGNFFVAHLELVKLVRCRCDKMKIKRPAVTANREKQIPD--CRPGAGT 29
HT + Y R +V L+ + C C + +K T+ RE+ D RP A T
Sbjct: 361 HTSKVAYTDRLRVYVTRCALLIVQYCCCQPVTVKAEMDTSYREEAEDDNSVRPLANT 417
>11_06_0545 + 24839536-24843421,24843871-24844310
Length = 1441
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 291 LSHTDHHALMAGLPTIEGN-TARGASYPAKPALHIPEPLSTTNAATSSSHI 142
++HTD A P+ + N T+RG+S+ + A+HIP + + SH+
Sbjct: 1018 VAHTD-----APTPSKDDNLTSRGSSHESFTAIHIPRGIKNMTSMQILSHV 1063
>07_03_1449 - 26608547-26608663,26608864-26608912,26609139-26609194
Length = 73
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 231 QCFPRSWEAPPSGRDGRYGTEGLLCRR*GTEQKRY 335
Q RSWE G+DG+ G+ CR TEQ+ Y
Sbjct: 4 QACRRSWE----GQDGKAGSFQTCCRMKNTEQQDY 34
>03_02_0235 +
6644083-6644125,6645218-6645315,6645448-6645498,
6645573-6645686,6645771-6645971,6646047-6646148,
6647245-6647352,6647745-6647995,6648108-6648279,
6648341-6648397,6648555-6648710,6648807-6648857,
6649053-6649193,6649270-6649464,6649534-6649665,
6649768-6649941,6650396-6650635,6650761-6650955
Length = 826
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 70 REKQIPDCRPGAGTPAPGILPA 5
+EK+ P +P AG PAP +PA
Sbjct: 537 QEKKAPGKKPPAGAPAPAPVPA 558
>04_03_1001 - 21609280-21610131
Length = 283
Score = 27.1 bits (57), Expect = 5.4
Identities = 18/69 (26%), Positives = 26/69 (37%)
Frame = -2
Query: 289 VPYRPSRPDGGASHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRC 110
VPY GG + K C R+ + G A G G + A + +K C C
Sbjct: 7 VPYEGGSAGGGGGGGKYKECMRNHAAAMGGQAFDGC------GEYMPASPDSLKCAACGC 60
Query: 109 DKMKIKRPA 83
+ +R A
Sbjct: 61 HRSFHRRAA 69
>03_01_0273 -
2107778-2108772,2108857-2109043,2109121-2110575,
2110670-2111251
Length = 1072
Score = 27.1 bits (57), Expect = 5.4
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Frame = +3
Query: 9 GRIPGAGVPAPGRQSGICFSRLAVTAGRLIFILSHLH-----LTNFTNSRCAT 152
G G P P G RL V L FILSH+H L+ F+ RC++
Sbjct: 792 GMASGGQNPRPSTSRGT--QRLYVRLNTLHFILSHVHALDKSLSFFSRGRCSS 842
>12_01_0498 -
3955300-3955317,3955399-3955503,3955600-3955677,
3955764-3955838,3956339-3956425,3956507-3956574,
3957604-3957691,3957794-3957894,3957967-3958087,
3958434-3958556,3958687-3958752
Length = 309
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 3 PAGRIPGAGVPAPGRQSGICFSRLAVTAGRLIFILSHLH 119
P GR+P AG P+P F R+ + + + I LS H
Sbjct: 161 PEGRLPAAGPPSPAEHLREVFYRMGL-SDKEIVALSGAH 198
>11_01_0419 +
3226224-3226756,3228010-3228169,3228256-3228435,
3228525-3228659,3229262-3229344,3229442-3229535,
3229649-3229735
Length = 423
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -2
Query: 271 RPDGGA--SHDRGKHCARSIISCEAGLAHTGAIVYYQRG 161
R DG + SH+ G ++ +S AGL GA+V+ QRG
Sbjct: 339 RADGNSKLSHEIGLELSK--MSTAAGLRPIGAVVFMQRG 375
>08_01_0552 - 4842417-4842632,4842878-4843378
Length = 238
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -2
Query: 319 VPHLLHKSPSVPYRPSRPDGGASHDRGKHCARSIISCEAGLAHTGAIVYYQRGN 158
VP L + + PY + DGG + + G + I +G A+ A + GN
Sbjct: 136 VPFLALGAAAAPYSGNGSDGGFAREHGMDAEQVKIDIPSGAANAAADADARGGN 189
>01_05_0612 - 23652121-23652400,23653031-23654427
Length = 558
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -2
Query: 277 PSRPDGGASHDRGKHCARSIISCEAGLAH 191
P P G HDRG+ R SC+ H
Sbjct: 487 PGIPQGDEEHDRGESTGRVAQSCDGLCGH 515
>08_02_1402 -
26786011-26786128,26786263-26786516,26787505-26787732,
26788920-26789759
Length = 479
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 262 GGASHDRGKHCARSIISCEAGLAHTGA 182
GG+S+DRG + I C+ + TGA
Sbjct: 391 GGSSNDRGSALPKEISFCDQTVVPTGA 417
>08_02_1037 - 23851750-23852132,23852622-23852784
Length = 181
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 343 GSGYLFCSVPHLLHKSPSVPYRPSRPDGGAS 251
GSG + P P+ P PS+P GGAS
Sbjct: 129 GSGTPPSTTPGSSGTPPATPSSPSKPTGGAS 159
>05_05_0017 + 21546434-21546841
Length = 135
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 49 CRPGAGTPAPGILPAG 2
CRPG PAP PAG
Sbjct: 67 CRPGEPVPAPSSSPAG 82
>04_04_0212 + 23646043-23646369,23646457-23647304,23647409-23649158
Length = 974
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 186 PVCARPASQDMMLLAQCFPRSWEAPPSGRDGRYGT 290
P+C+ P +++ + Q S E P G DG G+
Sbjct: 256 PLCSDPERANILTIMQAVGASGEWAPRGHDGAGGS 290
>02_05_1214 + 34976814-34979813
Length = 999
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 12 RIPGAGVPAPGRQ 50
R+P AGVPAPG +
Sbjct: 104 RVPAAGVPAPGEE 116
>01_05_0698 + 24376193-24376708
Length = 171
Score = 26.2 bits (55), Expect = 9.4
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 387 VIPVSGDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHHALMAG 256
V PV+G V G F CL Y+R H + HA + G
Sbjct: 124 VAPVAGVLVMGADVAGVSALFGFCLAEYLR----HNEAHAAVDG 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,930,715
Number of Sequences: 37544
Number of extensions: 307980
Number of successful extensions: 998
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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