Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0035
(392 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 103 3e-23
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 103 3e-23
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 103 3e-23
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 103 3e-23
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 103 3e-23
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 103 3e-23
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 103 3e-23
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 103 3e-23
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 103 3e-23
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 103 3e-23
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 103 3e-23
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 103 3e-23
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 103 3e-23
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 103 3e-23
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 87 6e-18
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 57 4e-09
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 46 1e-05
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 40 8e-04
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr... 27 3.6
AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical ... 27 3.6
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 3.6
Z93379-3|CAB07590.1| 282|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z81047-2|CAB02828.1| 376|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 27 4.8
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 27 4.8
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 27 4.8
AF100663-1|AAC68979.2| 173|Caenorhabditis elegans Hypothetical ... 26 8.4
AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical ... 26 8.4
AF003142-8|AAB54185.2| 205|Caenorhabditis elegans Hypothetical ... 26 8.4
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 82
Score = 73.3 bits (172), Expect = 6e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +2
Query: 149 DEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
+EE+AALVVDNGSGMCKAGFAG DAPRAVFPSIVG P
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 38
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 79.8 bits (188), Expect = 6e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
MCD+EVAALVVDNGSGMCKAGFAG DAPRAVFPSIVG P
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
MCD++VAALVVDNGSGMCKAGFAG DAPRAVFPSIVG P
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 79.8 bits (188), Expect = 6e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
MCD+EVAALVVDNGSGMCKAGFAG DAPRAVFPSIVG P
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 79.8 bits (188), Expect = 6e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
MCD+EVAALVVDNGSGMCKAGFAG DAPRAVFPSIVG P
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 79.8 bits (188), Expect = 6e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
MCD+EVAALVVDNGSGMCKAGFAG DAPRAVFPSIVG P
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 77.0 bits (181), Expect = 5e-15
Identities = 33/39 (84%), Positives = 37/39 (94%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
MCD++VAAL++DNGSGMCKAGFAG DAPRAVFPSIVG P
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 79.8 bits (188), Expect = 6e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
MCD+EVAALVVDNGSGMCKAGFAG DAPRAVFPSIVG P
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 23 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 69
Score = 41.1 bits (92), Expect = 3e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 197 KAGFAGYDAPRAVFPSIVGSP 259
+AGFAG DAPRAVFPSIVG P
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRP 25
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 79.8 bits (188), Expect = 6e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
MCD+EVAALVVDNGSGMCKAGFAG DAPRAVFPSIVG P
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
MCD++VAALVVDNGSGMCKAGFAG DAPRAVFPSIVG P
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 79.8 bits (188), Expect = 6e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
MCD+EVAALVVDNGSGMCKAGFAG DAPRAVFPSIVG P
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 78.6 bits (185), Expect = 1e-15
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
MCD++VAALVVDNGSGMCKAGFAG DAPRAVFPSIVG P
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 103 bits (248), Expect = 3e-23
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 79.8 bits (188), Expect = 6e-16
Identities = 36/39 (92%), Positives = 37/39 (94%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
MCD+EVAALVVDNGSGMCKAGFAG DAPRAVFPSIVG P
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 39
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 86.6 bits (205), Expect = 6e-18
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +1
Query: 274 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI TNWDDM
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 39
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 57.2 bits (132), Expect = 4e-09
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = +1
Query: 250 GKPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
G+P++ VM G D ++G +A+S RG+ +++YP+EHGI NW DM
Sbjct: 39 GRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDM 85
Score = 41.1 bits (92), Expect = 3e-04
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 167 LVVDNGSGMCKAGFAGYDAPRAVFPSIVGSP 259
+V+DNGSG+ KAGFAG P+ F + VG P
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRP 41
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 46.0 bits (104), Expect = 1e-05
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +2
Query: 167 LVVDNGSGMCKAGFAGYDAPRAVFPSIVGSPAIRA 271
+VVDNG+G K G+AG + P +FPS+VG P +R+
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRS 43
Score = 41.5 bits (93), Expect = 2e-04
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 292 KDSYVGDEAQSKRGILTLKYPIEHGIATNWDDM 390
KD VG+E R +L + YP+++GI NWDDM
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDM 85
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 39.5 bits (88), Expect = 8e-04
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 271 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIATNWDDM 390
V G+ D ++GDEA S T+KYPI HGI +WD M
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLM 96
Score = 35.5 bits (78), Expect = 0.014
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 143 MCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPSIV 250
M ++ A V+DNG+G K G+AG P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical
protein C46A5.4 protein.
Length = 1432
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 127 ISLIQDVRRRSCRVGSRQWLRYVQGRLRRI 216
+ + ++ + R+G RQW RY +G RRI
Sbjct: 655 LPITKETVEKVIRLGLRQWQRYEEGEGRRI 684
>AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical
protein F29G9.2a protein.
Length = 535
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 261 AGLPTIEGNTARGASYPAKPAL-HIPEPLSTTNAATSSS 148
A + + G++A Y AKP L H+P P STT ++ SS
Sbjct: 9 ANMSSESGSSASTVHY-AKPVLRHVPMPSSTTPSSIGSS 46
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 381 PVSGDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 271
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z93379-3|CAB07590.1| 282|Caenorhabditis elegans Hypothetical
protein F21H7.4 protein.
Length = 282
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 316 PHLLHKSPSVPYRPSRPDGGASHDRG 239
PH H+ P P+RP RP D G
Sbjct: 80 PHRPHRPPHRPHRPPRPPPRPECDEG 105
>Z81047-2|CAB02828.1| 376|Caenorhabditis elegans Hypothetical
protein C41G6.3 protein.
Length = 376
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 176 DNGSGMCKAGFAGYDAPRAVFPSIVGSPAIRA*W 277
DN + +CK+ F + PR V + V P + + W
Sbjct: 195 DNANEICKSMFESFITPRYVLATPVNLPKLMSTW 228
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 27.1 bits (57), Expect = 4.8
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 137 FKMCDEEVAALVVDNGSGMCKAGFAGYDAPRAVFPS-IVGSPAIRA*WSVWD 289
F + E+ V G +C +GF G D P V I+G I +SV+D
Sbjct: 350 FSLKGEDYVLKVSQGGKTICLSGFMGIDLPERVGELWILGDVFIGRYYSVFD 401
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 27.1 bits (57), Expect = 4.8
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 179 NGSGMCKAGFAGYDAPRAVFPS-IVGSPAIRA*WSVWD 289
NG C +GF G D P P I+G I +SV+D
Sbjct: 346 NGGSTCLSGFMGMDIPAPAGPLWILGDVFIGRFYSVFD 383
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.1 bits (57), Expect = 4.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 197 KAGFAGYDAPRAVFPSIVGSPAIR 268
KA + G+D P+A F I+G+ R
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYR 67
>AF100663-1|AAC68979.2| 173|Caenorhabditis elegans Hypothetical
protein K08B4.2 protein.
Length = 173
Score = 26.2 bits (55), Expect = 8.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 50 IGYLFLTVSSHCRAFNFHLVTPTSY*FH*FKMCDEEV 160
+ LFLTVS + AF F ++ T F + DEEV
Sbjct: 6 VAILFLTVSQYGSAFEFQVLDYTPVEFSFNQDIDEEV 42
>AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical
protein F29G9.2b protein.
Length = 525
Score = 26.2 bits (55), Expect = 8.4
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 240 GNTARGASYPAKPAL-HIPEPLSTTNAATSSS 148
G++A Y AKP L H+P P STT ++ SS
Sbjct: 6 GSSASTVHY-AKPVLRHVPMPSSTTPSSIGSS 36
>AF003142-8|AAB54185.2| 205|Caenorhabditis elegans Hypothetical
protein F57C9.2 protein.
Length = 205
Score = 26.2 bits (55), Expect = 8.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 265 DGGASHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFVA 146
+G R + C + I C G A+VY GNFF++
Sbjct: 53 EGSVRLSRDECCKATPIMCLQGQVCLRALVYSPYGNFFLS 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,914,720
Number of Sequences: 27780
Number of extensions: 220453
Number of successful extensions: 731
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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