Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0025
(588 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.075
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 34 0.099
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 34 0.099
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 33 0.17
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 32 0.40
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3) 31 0.92
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 30 1.2
SB_48872| Best HMM Match : GASA (HMM E-Value=0.16) 30 1.6
SB_59480| Best HMM Match : ZU5 (HMM E-Value=2.4e-38) 29 2.1
SB_26474| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40) 29 2.8
SB_7449| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 28 4.9
SB_31652| Best HMM Match : Peptidase_C2 (HMM E-Value=0) 28 6.5
SB_49976| Best HMM Match : SEC-C (HMM E-Value=0.95) 27 8.6
SB_45897| Best HMM Match : Peptidase_C50 (HMM E-Value=2.7e-08) 27 8.6
SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25) 27 8.6
SB_28799| Best HMM Match : SEC-C (HMM E-Value=0.95) 27 8.6
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_20396| Best HMM Match : SEC-C (HMM E-Value=1.5) 27 8.6
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 34.3 bits (75), Expect = 0.075
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T A + +T ++ T V+S+ + E TA+P +T P + + LET P
Sbjct: 858 ETTVAPETTVEPETTVASKTTVASETTVTPEATATPELTAGPATTLAPTTIGALETTEAP 917
Query: 453 DY 458
++
Sbjct: 918 EF 919
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T A + +T T +S + + E T + T+TP+ + + E ET V+P
Sbjct: 2806 ESTVAPETTMAPETTVEPETTLSPETTVAPETTVALGTTVTPETTVAPETTEEPETTVVP 2865
Query: 453 D 455
+
Sbjct: 2866 E 2866
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T A++ +T + T V+ + E T + T+TP+ + + E ET V+P
Sbjct: 3146 ETTVASETTAEPDTTQAPETTVTPETTKAPETTVASETTVTPETTVAPETTEEPETTVVP 3205
Query: 453 D 455
+
Sbjct: 3206 E 3206
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T ++ ST ++ T V + ++ E T P T TP+ + + ET V+P
Sbjct: 3414 ETTALPESTVAPESTVASMTTVLPETTVVPETTVVPGTTPTPESTVAPETTVAPETTVIP 3473
Query: 453 D 455
+
Sbjct: 3474 E 3474
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T AT++ +T S T V+ + + E TA+P T+ P+ + ET P
Sbjct: 2331 ESTAATESTVAPETTVSQETTVAPETTVPTETTAAPETTVAPEITFAPETTLPPETTAAP 2390
Query: 453 D 455
D
Sbjct: 2391 D 2391
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T A + +TP+ T +S+ + E T +P VTL P + + ET P
Sbjct: 506 ESTVAPEITVAPETTPALETTSASESTVATESTVAPEVTLPPGTTVAPETTVAPETTAAP 565
Query: 453 D 455
+
Sbjct: 566 E 566
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T AT++ +T S T V+ + + E TA+P T+ P + ET P
Sbjct: 368 ESTAATESTVAPETTVSQETTVAPETTVPTETTAAPETTVAPDITFAPETTVPPETTGAP 427
Query: 453 D 455
D
Sbjct: 428 D 428
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T AT++ +T S T V+ + + E TA+P T+ P + ET P
Sbjct: 1437 ESTAATESTVAPETTVSQETTVAPETTVPTETTAAPETTVAPDITFAPETTVPPETTGAP 1496
Query: 453 D 455
D
Sbjct: 1497 D 1497
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T + P +T + T + + E TA+P+ T+ P+ + + ET V+P
Sbjct: 1871 ETTVVHETTAPPETTVAPETTAAPDTTVAGETTAAPDTTMAPEITVAPETTVAPETTVVP 1930
Query: 453 D 455
+
Sbjct: 1931 E 1931
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T A + +TP+ T +S+ E T +P VTL P + + ET P
Sbjct: 2812 ESTVAPEITVVPETTPALETTSASESTDATESTVAPEVTLPPGTTVAPETTVAPETTAAP 2871
Query: 453 D 455
+
Sbjct: 2872 E 2872
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T + +T + T + + + E TA+P+ T+ P+ + + ET V+P
Sbjct: 2127 ESTVPPETTVATETTVAPETTAAPESTLAPEITAAPDTTMVPESTVAPETTVAPETTVVP 2186
Query: 453 D 455
+
Sbjct: 2187 E 2187
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +3
Query: 279 TNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMPD 455
T A + +T + T V+ + E TA+P T+ P+ + LET ++P+
Sbjct: 2195 TVAQETTVAPETTVAPETTVAPETTAALETTAAPVTTMVPETTAAPATTAALETSIVPE 2253
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T A + ST + + V+ + + E A+P+ T+ P+ + ET P
Sbjct: 804 ETTPALETTSAPESTAATESTVAPETTVPTETAAAPDTTVAPEITFAPETTVPPETTAAP 863
Query: 453 D 455
D
Sbjct: 864 D 864
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T AT++ +T S T V+ + + E TA+P T+ P+ + ET P
Sbjct: 2689 ESTAATESTVAPETTVSQETTVAPETTVPTETTAAPETTVAPEITFAPETTVPPETTAAP 2748
Query: 453 D 455
D
Sbjct: 2749 D 2749
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T AT++ +T S T V+ + + E TA+P TL P+ + + E P
Sbjct: 1729 ESTAATESTVAPETTVSQETTVAPETTVPTETTAAPETTLEPEITVAPETTVAPEITAAP 1788
Query: 453 D 455
D
Sbjct: 1789 D 1789
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T A P ST + + ++ + + T +P T+ P + + + LET V P
Sbjct: 1867 ETTTAPVTTLPPDSTMAPKSTLAPETTAAPDTTLAPETTVAPDTTVAPETTAALETTVAP 1926
Query: 453 DYRQNNRPYSDVRCRENYCFAEAT 524
D PY+ V E AE T
Sbjct: 1927 D--TTAAPYTTV-AAETTASAETT 1947
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T + +T +A T + + ++ E TA+P + TP+ + + S T + P
Sbjct: 2224 ETTMPPETTMAPETTVAAETTAAPETTVVPETTAAPETSATPETTMVPETTSAPSTTMAP 2283
Query: 453 D 455
+
Sbjct: 2284 E 2284
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T A + +T +A T + + E +A+P+ T+ PQ ET + P
Sbjct: 2923 ETTVAAETTAAAETTAAAETTAAPETTAAPETSAAPDTTMVPQTTSAPATTMAPETTLAP 2982
Query: 453 D 455
+
Sbjct: 2983 E 2983
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T A + +T A T V+ + E TA+P T P+ + + +E+ET + P
Sbjct: 602 ETTMAPETTTAPETTAKAETTVAPETSAAPETTAAPETTAAPETTMAPETTAEIETTMTP 661
Query: 453 D 455
+
Sbjct: 662 E 662
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 279 TNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMPD 455
T A + +T ++ T V+S+ E TA+P+ ++ P+ + + ET PD
Sbjct: 748 TAAPETTAEPETTAASETTVASETTAAPETTAAPDTSVAPETTAAPETTAAPETTAAPD 806
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T A + +T + T + + + E TA+P T TP+ L+ ET P
Sbjct: 926 ETTAAPETTATPDTTAATETTAAPETTAVPETTAAPETTSTPETTSTPGTLAASETTAAP 985
Query: 453 D 455
+
Sbjct: 986 E 986
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T A + +T + T + + +E TA+P T P+ + + LET P
Sbjct: 686 ETTAAPETTAAPETTAAPETTAAPETTSASETTAAPETTTAPETTAASETTAVLETTAAP 745
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T A P ST + + ++ + + T +P T+ P + + + LET V P
Sbjct: 66 ETTTAPVTTLPPDSTMAPKSTLAPETTAAPDTTLAPETTVAPDTTVAPETTAALETTVAP 125
Query: 453 DYRQNNRPYSDVRCRENYCFAEAT 524
D PY+ V E AE T
Sbjct: 126 D--TTAAPYTTV-AAETTASAETT 146
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T + +T +A T + + ++ E TA+P + TP+ + + S T + P
Sbjct: 411 ETTMPPETTMAPETTVAAETTAAPETTVIPETTAAPETSATPETTMVPETTSAPSTTMAP 470
Query: 453 D 455
+
Sbjct: 471 E 471
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 237 QKSDCRRIMPNSEGTNATQAVFPVRSTPSAS 329
Q+ C I+ + EG N TQA FPV S P+ S
Sbjct: 176 QREPCATIL-SQEGRNGTQAAFPVTSIPNES 205
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 270 SEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTL 392
SEGT A + P ST ++ V+S+ + E T+SP++T+
Sbjct: 26 SEGTFAPRTTGPHESTVASGATVASKNTVTPETTSSPDITV 66
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +3
Query: 312 STPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMPD 455
+T T + + E TA+P T P+ K + LET +PD
Sbjct: 2240 TTAVPETTAVPETTAVPETTAAPETTAPPETTALPKTTAALETFSIPD 2287
>SB_33380| Best HMM Match : Herpes_capsid (HMM E-Value=3)
Length = 474
Score = 30.7 bits (66), Expect = 0.92
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 210 RRRLDLEYYQKSDCRRIMPNSEGTN-ATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNV 386
R R+ L Y R P T+ T A F ++ +AST +++ P+ + +++ +
Sbjct: 114 RYRMMLARYFTGQISRPPPRPASTSLTTSAAFTSSTSSAASTSLTTSPVSTSSTSSAAST 173
Query: 387 TLTPQDLIYKKCLSEL--ETLVMPDYRQNNR 473
+LTP I +E + ++P Q R
Sbjct: 174 SLTPAPNILSAAATECYSDEAIIPSTPQKKR 204
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 30.7 bits (66), Expect = 0.92
Identities = 27/106 (25%), Positives = 41/106 (38%)
Frame = +3
Query: 267 NSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLV 446
N T FP+ +T S+M S+QP AE TAS ++T L E T+
Sbjct: 1807 NKACTQVIATTFPLINTTGISSMASAQP-TTAETTASTPTSITSSPSSPSTILPETRTIP 1865
Query: 447 MPDYRQNNRPYSDVRCRENYCFAEATNTSAISGERMRIQSFQHPLL 584
+ + + +T TS I E + Q+ H L+
Sbjct: 1866 KTNVVEGGAKITPKPSDAPAIPITSTGTSQIIEESITKQTSTHELI 1911
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 273 EGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPNVTLTPQDLIYKKCLSELETLVMP 452
E T A + +TP+ T +S+ E T +P VTL P + + ET P
Sbjct: 557 ESTVAPEITVVPETTPALETTSASESTDATESTVAPEVTLPPGTTVAPETTVAPETTAAP 616
Query: 453 D 455
+
Sbjct: 617 E 617
>SB_48872| Best HMM Match : GASA (HMM E-Value=0.16)
Length = 144
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 319 GVERTGNTACVAFVPSEFGIILLQSDFW*YSRSNRL 212
G ER+ N +C F P G I+ + D W + +L
Sbjct: 100 GFERSANNSCKCFCPPRSGTIVPEKDSWRCKENGKL 135
>SB_59480| Best HMM Match : ZU5 (HMM E-Value=2.4e-38)
Length = 903
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 369 TASPNVTLTPQDLIYKKCLSELETLVMPDYRQNNRPYSDVRCRENYCF 512
T SP VTL P D+I+KK ++ T+ P Y + P R CF
Sbjct: 435 TVSPVVTLEPADIIFKKPVT--VTIPCPVYSGQSNPDIQPSLRLLCCF 480
>SB_26474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +1
Query: 100 RNNYLFAFILMSFTVCTTIEQSGNLLT----LKKRTRRKIAEDDWIWSTTKSPTAEE 258
+ NY F + SF T Q T K RTRR++ DD + T +PT E
Sbjct: 16 KGNYTFDLTIRSFDGAETCRQFSTFTTPIPQQKCRTRRRLVCDDGLAITDATPTDTE 72
>SB_133| Best HMM Match : Sushi (HMM E-Value=5e-40)
Length = 607
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 120 VYFDVVYRVHNN*TIWKPFNFEEADEKKNCRRRLDLEYYQKSDCRRIMPNSEGTNATQAV 299
+Y D V+ +H + I+ DE+K C+ D+ Y + R + GT+
Sbjct: 457 IYRDAVFHLHKDDEIYVDSRVYADDERKFCKDPGDIPYGNRDKGRSDSSHRVGTSIRYWC 516
Query: 300 FP 305
FP
Sbjct: 517 FP 518
>SB_7449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 452 WHYQSFQF*KTFLINQVLRCKRNIW 378
WH+ + QF T LIN++ C+R W
Sbjct: 93 WHFAALQFSDTRLINKI-ECRRKKW 116
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 240 KSDCRRIMPNSEGTNATQAVFPVRSTPSASTMVSSQPLIMAEGTASPN 383
K+D + +S G N + P R+TP AST + L+M + PN
Sbjct: 236 KTDQQSECESSPGANTDRLESPARTTPQASTPYGTS-LLMVKPDTLPN 282
>SB_31652| Best HMM Match : Peptidase_C2 (HMM E-Value=0)
Length = 1133
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/81 (25%), Positives = 33/81 (40%)
Frame = +3
Query: 138 YRVHNN*TIWKPFNFEEADEKKNCRRRLDLEYYQKSDCRRIMPNSEGTNATQAVFPVRST 317
YR+H + P F E + R+ E Q + CR +P + A V+P+
Sbjct: 502 YRLHAGEYVVIPSTFNPGQEG-DFLLRIFSERPQYASCRIQVPTTHDLIAVATVYPLTHI 560
Query: 318 PSASTMVSSQPLIMAEGTASP 380
S V + ++A GT P
Sbjct: 561 DSCRIQVPTTHDLIAVGTGYP 581
>SB_49976| Best HMM Match : SEC-C (HMM E-Value=0.95)
Length = 1037
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -1
Query: 246 RTFGSTPDPIVFCNFSS--RPLLQS*KVSRLFNCCAHGKR 133
+ FG P PI+ + SS R L +S + L C +G+R
Sbjct: 370 KVFGPDPPPIILADHSSRRRSLPESTNLYELLECPCYGRR 409
>SB_45897| Best HMM Match : Peptidase_C50 (HMM E-Value=2.7e-08)
Length = 1907
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -2
Query: 578 RMLKALNSHSLTRYC*SVCCLSKTIIFSASDVTVRSVI 465
++ +N +++R+C VCC+ K + S V R +
Sbjct: 308 KLTNTVNGSTISRFCACVCCVIKASLLVESKVLNRKTL 345
>SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25)
Length = 781
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -1
Query: 246 RTFGSTPDPIVFCNFSS--RPLLQS*KVSRLFNCCAHGKR 133
+ FG P PI+ + SS R L +S + L C +G+R
Sbjct: 7 KVFGPDPPPIILADHSSRRRSLPESTNLYELLECPCYGRR 46
>SB_28799| Best HMM Match : SEC-C (HMM E-Value=0.95)
Length = 710
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -1
Query: 246 RTFGSTPDPIVFCNFSS--RPLLQS*KVSRLFNCCAHGKR 133
+ FG P PI+ + SS R L +S + L C +G+R
Sbjct: 381 KVFGPDPPPIILADHSSRRRSLPESTNLYELLECPCYGRR 420
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 477 YSDVRCRENYCFAEATNTSAISGERMRIQS 566
Y DV+C+E+ C+ N I G R+ + S
Sbjct: 1435 YHDVQCQESVCYCVNANGDEIYGTRVDMPS 1464
>SB_20396| Best HMM Match : SEC-C (HMM E-Value=1.5)
Length = 715
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -1
Query: 246 RTFGSTPDPIVFCNFSS--RPLLQS*KVSRLFNCCAHGKR 133
+ FG P PI+ + SS R L +S + L C +G+R
Sbjct: 557 KVFGPDPPPIILADHSSRRRSLPESTNLYELLECPCYGRR 596
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,690,893
Number of Sequences: 59808
Number of extensions: 378466
Number of successful extensions: 1068
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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