Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0023
(531 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 97 3e-19
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 90 3e-17
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 86 4e-16
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 81 2e-14
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 78 1e-13
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 77 2e-13
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 62 6e-09
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 1e-05
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 49 6e-05
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 41 0.021
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 40 0.036
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 40 0.047
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 39 0.083
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 39 0.083
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 38 0.14
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 37 0.33
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 37 0.33
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 36 0.58
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 35 1.0
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 35 1.3
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 35 1.3
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 34 1.8
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 34 1.8
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 34 2.4
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 33 3.1
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 33 3.1
UniRef50_Q896J7 Cluster: Iron-sulfur flavoprotein; n=1; Clostrid... 33 4.1
UniRef50_Q56899 Cluster: Orf0.67; n=1; Yersinia enterocolitica|R... 32 7.2
UniRef50_A2U8Z5 Cluster: Peptidase C26; n=2; Bacillaceae|Rep: Pe... 32 7.2
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 32 7.2
UniRef50_Q9QWE7 Cluster: Cysteine protease homolog; n=1; Rattus ... 32 9.5
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 96.7 bits (230), Expect = 3e-19
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = -1
Query: 255 KNDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 112
+NDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK KKERPRS
Sbjct: 96 ENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
Score = 90.2 bits (214), Expect = 3e-17
Identities = 42/48 (87%), Positives = 44/48 (91%)
Frame = -2
Query: 395 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEK 252
G LEKVGVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IE+
Sbjct: 49 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEE 96
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 89.8 bits (213), Expect = 3e-17
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = -1
Query: 249 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 112
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 86.2 bits (204), Expect = 4e-16
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = -2
Query: 395 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEK 252
G LEK+G+E+KQPNSAIRKCVRVQLIKNGKKVTAFVP DGCLN +++
Sbjct: 51 GIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDE 98
Score = 85.4 bits (202), Expect = 7e-16
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = -1
Query: 255 KNDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 112
+NDEVL+AGFGRKG A GDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 98 ENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 80.6 bits (190), Expect = 2e-14
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = -2
Query: 395 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEK 252
G LEK+G+EAKQPNSAI KC RVQL+KNGKK+ AFVP DGCLN I++
Sbjct: 119 GIVLEKIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKE 166
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 78.2 bits (184), Expect = 1e-13
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = -2
Query: 395 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEK 252
G LEKVGVEAKQPNSAIRKC+R+QLIKNG+++TAF P DG +N I++
Sbjct: 47 GIVLEKVGVEAKQPNSAIRKCIRIQLIKNGRQITAFCPGDGAINFIDE 94
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -1
Query: 255 KNDEVLVAGFG-RKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 118
++DEV + G G R G + GDIPGVRF+V KV +VSL + K+++P
Sbjct: 94 EHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVSLEEMVAGKRDKP 140
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 77.4 bits (182), Expect = 2e-13
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = -2
Query: 395 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEK 252
G LEKVGVEA++PN+A+RKCVRVQL+KNGK VTAFVP DG LN+I +
Sbjct: 52 GIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINE 99
Score = 53.2 bits (122), Expect = 4e-06
Identities = 24/47 (51%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = -1
Query: 255 KNDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 118
++DEV++ G +G ++GDIPGVRFKV+KV VSL A+++ KK++P
Sbjct: 99 EHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 62.5 bits (145), Expect = 6e-09
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = +2
Query: 104 YTYDLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSF 253
Y YDLG SFFS +A ++T T TTL TPG+SP A PL P PA TSSF
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSF 52
Score = 58.0 bits (134), Expect = 1e-07
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +1
Query: 265 FRQPSRGTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRGGPV 399
F+QPS GT AVTF PFL++ T TH +AE GCL S P FS+ P+
Sbjct: 57 FKQPSFGTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPL 101
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = -1
Query: 249 DEVLVAGFGRKGHAVGDIPGVRFKVVK 169
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 49.2 bits (112), Expect = 6e-05
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -1
Query: 255 KNDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 118
++DEV++ G +G A GD+PGVRFKV KV VSL A+ KK++P
Sbjct: 613 EHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNGVSLKAILLGKKQKP 659
Score = 43.6 bits (98), Expect = 0.003
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = -2
Query: 335 CVRVQLIKNGKKVTAFVPRDGCLNHIEK 252
CVRVQL KNGK VTAFVP DG LN I +
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINE 613
Score = 38.7 bits (86), Expect = 0.083
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -2
Query: 395 GPPLEKVGVEAKQPNSAIRKCVRVQLIKN 309
G LEKVGVEA++PN+A+RKCV + N
Sbjct: 52 GIVLEKVGVEARKPNAAVRKCVTPDTLIN 80
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 40.7 bits (91), Expect = 0.021
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = -2
Query: 371 VEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 273
++ K+PNSA+RKC RV+L NGK ++A +P +G
Sbjct: 99 LKPKKPNSALRKCARVRL-SNGKVISALIPGEG 130
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 39.9 bits (89), Expect = 0.036
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = -2
Query: 362 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 273
K+PNSA RKC RV+L NGK+V F+P +G
Sbjct: 82 KKPNSANRKCARVRL-SNGKEVICFIPGEG 110
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 39.5 bits (88), Expect = 0.047
Identities = 15/39 (38%), Positives = 31/39 (79%)
Frame = +1
Query: 139 VESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YFVVF 255
++S++R++GYF HLK +S ++T +TF+T+S + + ++F
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIF 46
Score = 33.5 bits (73), Expect = 3.1
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 252 FFDVV*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNF 380
F + V A + G E L VLNEL+ DA DGR+ L F
Sbjct: 46 FLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYF 88
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 38.7 bits (86), Expect = 0.083
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = -2
Query: 395 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 273
G L+ + + K+PNSA RKCV V+L NGK++TA++P G
Sbjct: 93 GVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIPGIG 132
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 38.7 bits (86), Expect = 0.083
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = -2
Query: 371 VEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEKTTKY*WRDSVVKVTPSVTF 195
V K+PNSA+RK RV+L NG +VTA++P +G +++++ + R VK P V +
Sbjct: 40 VTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNLQEHSIVLVRGGRVKDLPGVRY 95
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 37.9 bits (84), Expect = 0.14
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = -2
Query: 395 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 273
G L+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 31 GVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG 70
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 36.7 bits (81), Expect = 0.33
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -2
Query: 395 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 273
G L+ + + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 78 GVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG 117
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 36.7 bits (81), Expect = 0.33
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = -2
Query: 371 VEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 273
V+ K+PNSA+RK RV+L G+ VTA++P G
Sbjct: 61 VKPKKPNSAVRKVARVRL-STGRSVTAYIPGIG 92
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 35.9 bits (79), Expect = 0.58
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = -2
Query: 362 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 273
++PNSA+RK RV+L NG+ TA++P +G
Sbjct: 94 RKPNSAVRKVARVKL-SNGQMTTAYIPGEG 122
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 35.1 bits (77), Expect = 1.0
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = -2
Query: 362 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 273
K+PNSA+RK +++L KN K++ A++P +G
Sbjct: 41 KKPNSALRKIAKIKL-KNKKEILAYIPGEG 69
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 34.7 bits (76), Expect = 1.3
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -2
Query: 380 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 273
+VG+ + K+PNS RK RV+L GK +TA++P +G
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG 84
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 34.7 bits (76), Expect = 1.3
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -2
Query: 395 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 273
G L + ++ K+PNSA RK RV+L NG V+A++P +G
Sbjct: 60 GVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG 99
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -2
Query: 362 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 273
K+PNSA RKC RV+L G++ F+P +G
Sbjct: 71 KKPNSANRKCCRVRL-STGREAVCFIPGEG 99
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 34.3 bits (75), Expect = 1.8
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -2
Query: 395 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 273
G L+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 74 GVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 113
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 34.3 bits (75), Expect = 1.8
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -2
Query: 395 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 273
G L+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 60 GVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 99
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 33.9 bits (74), Expect = 2.4
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = -2
Query: 371 VEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEKTTKY*WRDSVVKVTPSVTF 195
V K+PNSA+RK RV+L G +VTA++P G +++++ R VK P V +
Sbjct: 40 VTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNLQEHAVVLVRGGRVKDLPGVRY 95
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 33.5 bits (73), Expect = 3.1
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 252 FFDVV*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNF 380
F + V A + G E L VLNEL+ DA DGR+ L F
Sbjct: 15 FLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYF 57
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 33.5 bits (73), Expect = 3.1
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -2
Query: 362 KQPNSAIRKCVRVQLIKNGKKVTAFVP 282
K+PNSA RKC ++L NGK ++A++P
Sbjct: 48 KKPNSAQRKCALLKL-SNGKTISAYIP 73
>UniRef50_Q896J7 Cluster: Iron-sulfur flavoprotein; n=1; Clostridium
tetani|Rep: Iron-sulfur flavoprotein - Clostridium
tetani
Length = 185
Score = 33.1 bits (72), Expect = 4.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 367 STPTFSRGGPVPIRPIVSRITIHWPSFYNRRDWEN 471
+TP + P P++ ++ R+ ++W Y R+D EN
Sbjct: 78 ATPIYFANVPSPLKALIDRLQVYWSKKYIRKDREN 112
>UniRef50_Q56899 Cluster: Orf0.67; n=1; Yersinia enterocolitica|Rep:
Orf0.67 - Yersinia enterocolitica
Length = 295
Score = 32.3 bits (70), Expect = 7.2
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = -2
Query: 422 RLTIGRIGTGPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 285
RLT R+GTG + VGVE A+R+C+ ++KN K A V
Sbjct: 101 RLT--RVGTGLQVRAVGVENAAVRHALRQCLLYDMVKNLLKNIAAV 144
>UniRef50_A2U8Z5 Cluster: Peptidase C26; n=2; Bacillaceae|Rep:
Peptidase C26 - Bacillus coagulans 36D1
Length = 234
Score = 32.3 bits (70), Expect = 7.2
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +1
Query: 61 YKQRASRQQVTYHNVHL*SWSLLFLFVESEERHVGYFYHLKTN--------SGNVTDGVT 216
+KQRA+R ++ H VH+ SLL + SE V F+H S DG+
Sbjct: 133 HKQRAARSHLS-HTVHVLPGSLLEKWAGSETMKVNSFHHQAVRTVKAPLMVSARAPDGII 191
Query: 217 FTTESRH*YFVVFSMW 264
E+R+ F++ W
Sbjct: 192 EAVENRNARFMIGVQW 207
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 32.3 bits (70), Expect = 7.2
Identities = 19/56 (33%), Positives = 33/56 (58%)
Frame = -2
Query: 362 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEKTTKY*WRDSVVKVTPSVTF 195
K+PNSA+RK +V+L N + A++P +G +++++ + R VK P V F
Sbjct: 43 KKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRGGRVKDLPGVKF 95
>UniRef50_Q9QWE7 Cluster: Cysteine protease homolog; n=1; Rattus
sp.|Rep: Cysteine protease homolog - Rattus sp
Length = 57
Score = 31.9 bits (69), Expect = 9.5
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2
Query: 455 VVTGKTLALPQLNRLCSTSPFSG 523
VVTGKTLA P+ CSTSPFSG
Sbjct: 14 VVTGKTLA-PKEVAPCSTSPFSG 35
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,015,621
Number of Sequences: 1657284
Number of extensions: 11082777
Number of successful extensions: 25080
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 24240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25073
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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