Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0016
(532 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 26 0.91
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 26 0.91
AY146744-1|AAO12104.1| 176|Anopheles gambiae odorant-binding pr... 25 1.6
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 25 2.1
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 25 2.1
AY146723-1|AAO12083.1| 155|Anopheles gambiae odorant-binding pr... 25 2.1
AY146721-1|AAO12081.1| 144|Anopheles gambiae odorant-binding pr... 25 2.1
AF437884-1|AAL84179.1| 144|Anopheles gambiae odorant binding pr... 25 2.1
AY146717-1|AAO12077.1| 188|Anopheles gambiae odorant-binding pr... 24 2.8
AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding pr... 23 4.8
AF515526-1|AAM61893.1| 229|Anopheles gambiae glutathione S-tran... 23 8.4
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 25.8 bits (54), Expect = 0.91
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 152 KIPVPTVFFKKRRLIVLEQRTTYDFTKYFEK 60
KI TVF +K R +++ Q + D+T+ F +
Sbjct: 28 KIANNTVFVRKNRALLIYQLSNKDYTEVFHE 58
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 25.8 bits (54), Expect = 0.91
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 262 KVEELRREIAQQPPNTPLTPEQAQ 333
+ E+ RE+ +PP TP+T ++++
Sbjct: 164 RAEKALREVQSEPPETPMTGKRSR 187
>AY146744-1|AAO12104.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP8 protein.
Length = 176
Score = 25.0 bits (52), Expect = 1.6
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 159 VFQDSSPYSVFQKTTPYCIRT 97
V ++S+P+S+FQ Y +RT
Sbjct: 37 VLRNSTPFSIFQTHGAYVVRT 57
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 24.6 bits (51), Expect = 2.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 365 CLMVEANSLTTWACSGVNGVF 303
C +E N L T AC+G N +
Sbjct: 3118 CYPIEYNGLLTTACAGTNSSY 3138
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 24.6 bits (51), Expect = 2.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 365 CLMVEANSLTTWACSGVNGVF 303
C +E N L T AC+G N +
Sbjct: 3121 CYPIEYNGLLTTACAGTNSSY 3141
>AY146723-1|AAO12083.1| 155|Anopheles gambiae odorant-binding
protein AgamOBP17 protein.
Length = 155
Score = 24.6 bits (51), Expect = 2.1
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 LES*KTM-DSCIGVEQDLDKAITKFTNLNEHTDEVLQ 250
LE+ K + D C+G ++AI KF++ H DE L+
Sbjct: 35 LEALKPLHDICLGKTGVTEEAIKKFSDEEIHEDEKLK 71
>AY146721-1|AAO12081.1| 144|Anopheles gambiae odorant-binding
protein AgamOBP1 protein.
Length = 144
Score = 24.6 bits (51), Expect = 2.1
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 LES*KTM-DSCIGVEQDLDKAITKFTNLNEHTDEVLQ 250
LE+ K + D C+G ++AI KF++ H DE L+
Sbjct: 35 LEALKPLHDICLGKTGVTEEAIKKFSDEEIHEDEKLK 71
>AF437884-1|AAL84179.1| 144|Anopheles gambiae odorant binding
protein protein.
Length = 144
Score = 24.6 bits (51), Expect = 2.1
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 LES*KTM-DSCIGVEQDLDKAITKFTNLNEHTDEVLQ 250
LE+ K + D C+G ++AI KF++ H DE L+
Sbjct: 35 LEALKPLHDICLGKTGVTEEAIKKFSDEEIHEDEKLK 71
>AY146717-1|AAO12077.1| 188|Anopheles gambiae odorant-binding
protein AgamOBP14 protein.
Length = 188
Score = 24.2 bits (50), Expect = 2.8
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 356 PSNRMHFNCQQITENSMLQCQRVGKSIDRHFV 451
P + C ++ N L C G IDRH++
Sbjct: 82 PETQCFVRC--LSANLNLYCDETGSDIDRHYL 111
>AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding
protein AgamOBP45 protein.
Length = 356
Score = 23.4 bits (48), Expect = 4.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 489 HFPPLEQLLHNRATKCLSIDL 427
H PL++L NR +CL +L
Sbjct: 103 HPDPLDELYENRTAECLRKEL 123
>AF515526-1|AAM61893.1| 229|Anopheles gambiae glutathione
S-transferase protein.
Length = 229
Score = 22.6 bits (46), Expect = 8.4
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 357 HQTECISIVNRSQRTPC 407
H TE +NR Q+ PC
Sbjct: 42 HLTEEFKAINRFQKVPC 58
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,688
Number of Sequences: 2352
Number of extensions: 10862
Number of successful extensions: 27
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -