Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0014
         (593 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119115-1|AAM50975.1|  715|Drosophila melanogaster RE15579p pro...    57   2e-08
AE014298-2|ABC67158.1|  715|Drosophila melanogaster CG17131-PB, ...    57   2e-08
AE014298-1|AAZ52488.1|  715|Drosophila melanogaster CG17131-PA, ...    57   2e-08

>AY119115-1|AAM50975.1|  715|Drosophila melanogaster RE15579p
           protein.
          Length = 715

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = +2

Query: 440 REEPDCQAASFSFVLNPLTPRA*TRCLLQNDTQANNP 550
           REE DCQAA+FSFV+NPL+P   T C LQND+ A NP
Sbjct: 69  REEADCQAAAFSFVVNPLSPSQETHCQLQNDSSAANP 105



 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = +3

Query: 342 RIAFEKLTDVDFSGTAYYTVRNLSLYECQG 431
           R+AFEKLTD DF G  YY+V+NLSLYECQG
Sbjct: 37  RMAFEKLTDFDFPGNTYYSVKNLSLYECQG 66


>AE014298-2|ABC67158.1|  715|Drosophila melanogaster CG17131-PB,
           isoform B protein.
          Length = 715

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = +2

Query: 440 REEPDCQAASFSFVLNPLTPRA*TRCLLQNDTQANNP 550
           REE DCQAA+FSFV+NPL+P   T C LQND+ A NP
Sbjct: 69  REEADCQAAAFSFVVNPLSPSQETHCQLQNDSSAANP 105



 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = +3

Query: 342 RIAFEKLTDVDFSGTAYYTVRNLSLYECQG 431
           R+AFEKLTD DF G  YY+V+NLSLYECQG
Sbjct: 37  RMAFEKLTDFDFPGNTYYSVKNLSLYECQG 66


>AE014298-1|AAZ52488.1|  715|Drosophila melanogaster CG17131-PA,
           isoform A protein.
          Length = 715

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = +2

Query: 440 REEPDCQAASFSFVLNPLTPRA*TRCLLQNDTQANNP 550
           REE DCQAA+FSFV+NPL+P   T C LQND+ A NP
Sbjct: 69  REEADCQAAAFSFVVNPLSPSQETHCQLQNDSSAANP 105



 Score = 55.6 bits (128), Expect = 5e-08
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = +3

Query: 342 RIAFEKLTDVDFSGTAYYTVRNLSLYECQG 431
           R+AFEKLTD DF G  YY+V+NLSLYECQG
Sbjct: 37  RMAFEKLTDFDFPGNTYYSVKNLSLYECQG 66


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,673,687
Number of Sequences: 53049
Number of extensions: 530784
Number of successful extensions: 894
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)