Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0013
(573 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 103 2e-21
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 91 2e-17
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 90 4e-17
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 75 2e-12
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 74 3e-12
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 73 6e-12
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 66 4e-10
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 57 3e-07
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 57 3e-07
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 57 3e-07
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 57 3e-07
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 54 2e-06
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 54 3e-06
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 42 0.014
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 41 0.024
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 40 0.041
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 39 0.072
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 39 0.096
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 39 0.096
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 38 0.13
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 38 0.17
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.29
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 37 0.39
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 37 0.39
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 36 0.51
UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7... 36 0.51
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 36 0.68
UniRef50_A2QN51 Cluster: Catalytic activity: beta-galactosidases... 35 1.2
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 35 1.2
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 35 1.6
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 35 1.6
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 34 2.1
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 34 2.1
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 33 3.6
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 33 3.6
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 33 6.3
UniRef50_A4CA20 Cluster: Glutathione-regulated potassium-efflux ... 33 6.3
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;... 32 8.3
UniRef50_A2U8Z5 Cluster: Peptidase C26; n=2; Bacillaceae|Rep: Pe... 32 8.3
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 103 bits (248), Expect = 2e-21
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = -3
Query: 253 NHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 98
N IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK KKERPRS
Sbjct: 92 NFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
Score = 82.6 bits (195), Expect = 6e-15
Identities = 38/42 (90%), Positives = 39/42 (92%)
Frame = -1
Query: 381 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 256
G LEKVGVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP DGC
Sbjct: 49 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGC 90
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 91.1 bits (216), Expect = 2e-17
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = -3
Query: 253 NHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 98
N ++ENDEVL+AGFGRKG A GDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 94 NFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
Score = 80.2 bits (189), Expect = 3e-14
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = -1
Query: 381 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 256
G LEK+G+E+KQPNSAIRKCVRVQLIKNGKKVTAFVP DGC
Sbjct: 51 GIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGC 92
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 89.8 bits (213), Expect = 4e-17
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = -3
Query: 235 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 98
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = -1
Query: 381 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 256
G LEK+G+EAKQPNSAI KC RVQL+KNGKK+ AFVP DGC
Sbjct: 119 GIVLEKIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPNDGC 160
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/52 (69%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Frame = -1
Query: 411 YDSL*GE-LGTGPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
YD L G + G LEKVGVEA++PN+A+RKCVRVQL+KNGK VTAFVP DG
Sbjct: 41 YDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPLDG 92
Score = 59.7 bits (138), Expect = 5e-08
Identities = 27/51 (52%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = -3
Query: 253 NHIEENDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 104
N+I E+DEV++ G +G ++GDIPGVRFKV+KV VSL A+++ KK++P
Sbjct: 95 NYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 72.5 bits (170), Expect = 6e-12
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = -1
Query: 381 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
G LEKVGVEAKQPNSAIRKC+R+QLIKNG+++TAF P DG
Sbjct: 47 GIVLEKVGVEAKQPNSAIRKCIRIQLIKNGRQITAFCPGDG 87
Score = 53.6 bits (123), Expect = 3e-06
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -3
Query: 253 NHIEENDEVLVAGFG-RKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 104
N I+E+DEV + G G R G + GDIPGVRF+V KV +VSL + K+++P
Sbjct: 90 NFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVSLEEMVAGKRDKP 140
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 66.5 bits (155), Expect = 4e-10
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = +3
Query: 90 YTYDLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWF 254
Y YDLG SFFS +A ++T T TTL TPG+SP A PL P PA TSSFSS F
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKF 57
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +2
Query: 257 QPSRGTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRGGPV 385
QPS GT AVTF PFL++ T TH +AE GCL S P FS+ P+
Sbjct: 59 QPSFGTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPL 101
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 56.8 bits (131), Expect = 3e-07
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +2
Query: 422 LAVVLQRRDWENPGVTQLNRLASTFPFRSGVIAEEA 529
LAVVLQRRDWENPGVTQLNRLA+ PF S +EEA
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEA 103
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 56.8 bits (131), Expect = 3e-07
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +2
Query: 422 LAVVLQRRDWENPGVTQLNRLASTFPFRSGVIAEEA 529
LAVVLQRRDWENPGVTQLNRLA+ PF S +EEA
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEA 57
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 56.8 bits (131), Expect = 3e-07
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +2
Query: 422 LAVVLQRRDWENPGVTQLNRLASTFPFRSGVIAEEA 529
LAVVLQRRDWENPGVTQLNRLA+ PF S +EEA
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEA 61
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 56.8 bits (131), Expect = 3e-07
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +2
Query: 422 LAVVLQRRDWENPGVTQLNRLASTFPFRSGVIAEEA 529
LAVVLQRRDWENPGVTQLNRLA+ PF S +EEA
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEA 43
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 54.0 bits (124), Expect = 2e-06
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +3
Query: 420 HWPSFYNVVTGKTLALPNLIALQ 488
HWPSFYNVVTGKTLALPNLIALQ
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQ 27
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 53.6 bits (123), Expect = 3e-06
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = -3
Query: 253 NHIEENDEVLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 104
N I E+DEV++ G +G A GD+PGVRFKV KV VSL A+ KK++P
Sbjct: 609 NLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNGVSLKAILLGKKQKP 659
Score = 41.5 bits (93), Expect = 0.014
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = -1
Query: 411 YDSL*GE-LGTGPPLEKVGVEAKQPNSAIRKCVRVQLIKN 295
YD L G + G LEKVGVEA++PN+A+RKCV + N
Sbjct: 41 YDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVTPDTLIN 80
Score = 39.9 bits (89), Expect = 0.041
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -1
Query: 321 CVRVQLIKNGKKVTAFVPRDG 259
CVRVQL KNGK VTAFVP DG
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDG 606
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = -3
Query: 235 DEVLVAGFGRKGHAVGDIPGVRFKVVK 155
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 41.5 bits (93), Expect = 0.014
Identities = 19/59 (32%), Positives = 36/59 (61%)
Frame = +2
Query: 125 VESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YFVVFFDVVWQPSRGTNAVTFFPFL 301
++S++R++GYF HLK +S ++T +TF+T+S + + ++F + V G P L
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDLLPVL 66
Score = 32.7 bits (71), Expect = 6.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +1
Query: 238 FLRCGLATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLE 372
FL A + G E L VLNEL+ DA DGR+ L F +
Sbjct: 46 FLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQ 90
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 40.7 bits (91), Expect = 0.024
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = -1
Query: 357 VEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
++ K+PNSA+RKC RV+L NGK ++A +P +G
Sbjct: 99 LKPKKPNSALRKCARVRL-SNGKVISALIPGEG 130
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 39.9 bits (89), Expect = 0.041
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = -1
Query: 348 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
K+PNSA RKC RV+L NGK+V F+P +G
Sbjct: 82 KKPNSANRKCARVRL-SNGKEVICFIPGEG 110
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 39.1 bits (87), Expect = 0.072
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 422 LAVVLQRRDWENPGVTQLNRLASTFPFRSGVIAEEAPHRSP 544
L +L RRDWENP +TQ +RL + PF S E A P
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRP 55
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 38.7 bits (86), Expect = 0.096
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = -1
Query: 381 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
G L+ + + K+PNSA RKCV V+L NGK++TA++P G
Sbjct: 93 GVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIPGIG 132
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 38.7 bits (86), Expect = 0.096
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 422 LAVVLQRRDWENPGVTQLNRLASTFPFRSGVIAEEAPHRSP 544
LA +L R DW+NP +T +NRL S P A+ A P
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEP 58
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 38.3 bits (85), Expect = 0.13
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -1
Query: 357 VEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
V K+PNSA+RK RV+L NG +VTA++P +G
Sbjct: 40 VTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG 71
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 37.9 bits (84), Expect = 0.17
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = -1
Query: 381 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
G L+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 31 GVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG 70
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 0.29
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 369 RGGARYPIRPIVSRIT 416
RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 36.7 bits (81), Expect = 0.39
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -1
Query: 381 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
G L+ + + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 78 GVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG 117
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 36.7 bits (81), Expect = 0.39
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = -1
Query: 357 VEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
V+ K+PNSA+RK RV+L G+ VTA++P G
Sbjct: 61 VKPKKPNSAVRKVARVRL-STGRSVTAYIPGIG 92
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 36.3 bits (80), Expect = 0.51
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = -1
Query: 471 WVTPGFSQSRRCKTTASEL*YDSL*GELGTGPPLEKVGVE 352
W GF C YDSL GELGTGPPLE G++
Sbjct: 260 WSKTGFRPF--CLEAGRRAYYDSLYGELGTGPPLEVDGID 297
>UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7;
Trichocomaceae|Rep: C6 finger domain protein, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 1148
Score = 36.3 bits (80), Expect = 0.51
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 425 PVNCNTTHYRANWVPGPPSRKLV*KLSSPTLPSANASVYSS 303
PV N +R W+PGPP+R ++ S + A S Y+S
Sbjct: 619 PVTDNPPDFRKEWIPGPPTRSVLSPAGSDMIIPAQGSFYAS 659
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 35.9 bits (79), Expect = 0.68
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = -1
Query: 348 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
++PNSA+RK RV+L NG+ TA++P +G
Sbjct: 94 RKPNSAVRKVARVKL-SNGQMTTAYIPGEG 122
>UniRef50_A2QN51 Cluster: Catalytic activity: beta-galactosidases
hydrolyse terminal; n=10; Pezizomycotina|Rep: Catalytic
activity: beta-galactosidases hydrolyse terminal -
Aspergillus niger
Length = 1009
Score = 35.1 bits (77), Expect = 1.2
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Frame = -1
Query: 510 PLRKGNVLARRLSWVTPGF--SQSRRCKTTASEL*YDSL*G--------ELGTGPPLE-K 364
P+ +G + A RL W PGF S ++ +T+S L S G +L L+
Sbjct: 849 PMNEGGLYAERLGWFLPGFPASDNKEFNSTSSPLDGISKPGVRFYVTAFDLDIDRDLDAP 908
Query: 363 VGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCQT 250
+GV PN I RV L NG + +VP G QT
Sbjct: 909 IGVSFSAPNGTI---ARVMLWVNGYQYGKYVPHIGPQT 943
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 35.1 bits (77), Expect = 1.2
Identities = 14/30 (46%), Positives = 24/30 (80%)
Frame = -1
Query: 348 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
K+PNSA+RK +++L KN K++ A++P +G
Sbjct: 41 KKPNSALRKIAKIKL-KNKKEILAYIPGEG 69
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/37 (45%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -1
Query: 366 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
+VG+ + K+PNS RK RV+L GK +TA++P +G
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG 84
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 34.7 bits (76), Expect = 1.6
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -1
Query: 381 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
G L + ++ K+PNSA RK RV+L NG V+A++P +G
Sbjct: 60 GVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG 99
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 34.7 bits (76), Expect = 1.6
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -1
Query: 348 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
K+PNSA RKC RV+L G++ F+P +G
Sbjct: 71 KKPNSANRKCCRVRL-STGREAVCFIPGEG 99
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 34.3 bits (75), Expect = 2.1
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -1
Query: 381 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
G L+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 74 GVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 113
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 34.3 bits (75), Expect = 2.1
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -1
Query: 381 GPPLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
G L+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 60 GVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG 99
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 33.5 bits (73), Expect = 3.6
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -1
Query: 348 KQPNSAIRKCVRVQLIKNGKKVTAFVP 268
K+PNSA RKC ++L NGK ++A++P
Sbjct: 48 KKPNSAQRKCALLKL-SNGKTISAYIP 73
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 33.5 bits (73), Expect = 3.6
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = -1
Query: 357 VEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDG 259
V K+PNSA+RK RV+L G +VTA++P G
Sbjct: 40 VTPKKPNSALRKVARVRL-TTGFEVTAYIPGVG 71
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 32.7 bits (71), Expect = 6.3
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +1
Query: 238 FLRCGLATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLE 372
FL A + G E L VLNEL+ DA DGR+ L F +
Sbjct: 15 FLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQ 59
>UniRef50_A4CA20 Cluster: Glutathione-regulated potassium-efflux
system protein KefC; n=3; Alteromonadales|Rep:
Glutathione-regulated potassium-efflux system protein
KefC - Pseudoalteromonas tunicata D2
Length = 617
Score = 32.7 bits (71), Expect = 6.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 292 KESDRIRPP*RLPNHIEENDEVLVAGFGRKGHAVG 188
++S R P P HIE V++AG+GR G +G
Sbjct: 389 EKSSRHAPSFDKPEHIEATKHVIIAGYGRFGQIIG 423
>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 195
Score = 32.3 bits (70), Expect = 8.3
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 422 LAVVLQRRDWENP 460
LAVVLQRRDWENP
Sbjct: 179 LAVVLQRRDWENP 191
>UniRef50_A2U8Z5 Cluster: Peptidase C26; n=2; Bacillaceae|Rep:
Peptidase C26 - Bacillus coagulans 36D1
Length = 234
Score = 32.3 bits (70), Expect = 8.3
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Frame = +2
Query: 47 YKQRASRQQVTYHNVHL*SWSLLFLFVESEERHVGYFYHLKTN--------SGNVTDGVT 202
+KQRA+R ++ H VH+ SLL + SE V F+H S DG+
Sbjct: 133 HKQRAARSHLS-HTVHVLPGSLLEKWAGSETMKVNSFHHQAVRTVKAPLMVSARAPDGII 191
Query: 203 FTTESRH*YFVVFFDVVWQP 262
E+R+ F++ V W P
Sbjct: 192 EAVENRNARFMI--GVQWHP 209
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,603,000
Number of Sequences: 1657284
Number of extensions: 13319411
Number of successful extensions: 32456
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 31319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32444
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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