Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0012
         (588 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    26   0.79 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.3  
AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      23   9.7  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   9.7  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 26.2 bits (55), Expect = 0.79
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 356 LVGLNGCGKSSLLAAL 403
           LVG NG GKS++LAA+
Sbjct: 112 LVGKNGSGKSAILAAM 127


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 396  ASNDDFPHPLSPTSPYLRPQ 337
            ASN D P  ++ T  YL+P+
Sbjct: 1142 ASNVDVPSTIAETDEYLQPK 1161


>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 381 FPHPLSPTSPYLRP 340
           F +PLSP SP  RP
Sbjct: 26  FANPLSPNSPAERP 39


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 356 LVGLNGCGKSSLLAAL 403
           + GLNG GKS++L ++
Sbjct: 30  ITGLNGTGKSNILDSI 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,446
Number of Sequences: 2352
Number of extensions: 11966
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)