Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0008
         (564 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128419-1|AAM75012.1|  741|Drosophila melanogaster GH14073p pro...    31   1.4  
AF239609-1|AAF63501.1|  741|Drosophila melanogaster SP1173 protein.    31   1.4  
AE014296-1144|AAN12079.1|  741|Drosophila melanogaster CG10121-P...    31   1.4  
AE014296-1143|AAN12078.1|  741|Drosophila melanogaster CG10121-P...    31   1.4  
AE014296-1142|AAF50650.1|  741|Drosophila melanogaster CG10121-P...    31   1.4  
AE014296-1141|AAN12077.1|  741|Drosophila melanogaster CG10121-P...    31   1.4  

>AY128419-1|AAM75012.1|  741|Drosophila melanogaster GH14073p
           protein.
          Length = 741

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
 Frame = +2

Query: 443 KFTPALSIL--VNVLFTTFWKH*HSYIY 520
           ++TP + +L  V++LF TFW   HSY++
Sbjct: 489 RYTPEILVLTLVSILFGTFWSSIHSYLW 516


>AF239609-1|AAF63501.1|  741|Drosophila melanogaster SP1173 protein.
          Length = 741

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
 Frame = +2

Query: 443 KFTPALSIL--VNVLFTTFWKH*HSYIY 520
           ++TP + +L  V++LF TFW   HSY++
Sbjct: 489 RYTPEILVLTLVSILFGTFWSSIHSYLW 516


>AE014296-1144|AAN12079.1|  741|Drosophila melanogaster CG10121-PD,
           isoform D protein.
          Length = 741

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
 Frame = +2

Query: 443 KFTPALSIL--VNVLFTTFWKH*HSYIY 520
           ++TP + +L  V++LF TFW   HSY++
Sbjct: 489 RYTPEILVLTLVSILFGTFWSSIHSYLW 516


>AE014296-1143|AAN12078.1|  741|Drosophila melanogaster CG10121-PC,
           isoform C protein.
          Length = 741

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
 Frame = +2

Query: 443 KFTPALSIL--VNVLFTTFWKH*HSYIY 520
           ++TP + +L  V++LF TFW   HSY++
Sbjct: 489 RYTPEILVLTLVSILFGTFWSSIHSYLW 516


>AE014296-1142|AAF50650.1|  741|Drosophila melanogaster CG10121-PB,
           isoform B protein.
          Length = 741

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
 Frame = +2

Query: 443 KFTPALSIL--VNVLFTTFWKH*HSYIY 520
           ++TP + +L  V++LF TFW   HSY++
Sbjct: 489 RYTPEILVLTLVSILFGTFWSSIHSYLW 516


>AE014296-1141|AAN12077.1|  741|Drosophila melanogaster CG10121-PA,
           isoform A protein.
          Length = 741

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
 Frame = +2

Query: 443 KFTPALSIL--VNVLFTTFWKH*HSYIY 520
           ++TP + +L  V++LF TFW   HSY++
Sbjct: 489 RYTPEILVLTLVSILFGTFWSSIHSYLW 516


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,764,673
Number of Sequences: 53049
Number of extensions: 478375
Number of successful extensions: 1065
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)