Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0006
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 156 1e-38
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 156 1e-38
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 156 1e-38
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 156 1e-38
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 156 1e-38
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 156 1e-38
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 155 3e-38
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 153 9e-38
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 148 3e-36
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 123 1e-28
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 123 1e-28
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 122 3e-28
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 122 3e-28
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 117 6e-27
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 103 1e-22
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 72 4e-13
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 42 3e-04
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 38 0.005
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 34 0.067
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 34 0.067
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 31 0.63
Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z47356-8|CAD27185.1| 477|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z47075-8|CAA87381.2| 477|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 3.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.9
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 7.7
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 7.7
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 7.7
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 7.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 156 bits (378), Expect = 1e-38
Identities = 82/134 (61%), Positives = 88/134 (65%)
Frame = +2
Query: 86 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 266 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKM 445
+K + PEEHPVLLTEAPLNPKA KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 446 THIMFPKHFTRPAI 487
T IMF + F PA+
Sbjct: 121 TQIMF-ETFNTPAM 133
Score = 103 bits (247), Expect = 1e-22
Identities = 58/106 (54%), Positives = 65/106 (61%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435
EAQSKRG LTLKYPIEHGIVTNWDDMEKIWHHTFYNEL VAP P P+ +R
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573
EK + +TF TP V IQ VL + R DS G++
Sbjct: 118 EKMTQI-MFETFNTPA-MYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 156 bits (378), Expect = 1e-38
Identities = 82/134 (61%), Positives = 88/134 (65%)
Frame = +2
Query: 86 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 266 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKM 445
+K + PEEHPVLLTEAPLNPKA KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 446 THIMFPKHFTRPAI 487
T IMF + F PA+
Sbjct: 121 TQIMF-ETFNTPAM 133
Score = 103 bits (247), Expect = 1e-22
Identities = 58/106 (54%), Positives = 65/106 (61%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435
EAQSKRG LTLKYPIEHGIVTNWDDMEKIWHHTFYNEL VAP P P+ +R
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573
EK + +TF TP V IQ VL + R DS G++
Sbjct: 118 EKMTQI-MFETFNTPA-MYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 156 bits (378), Expect = 1e-38
Identities = 82/134 (61%), Positives = 88/134 (65%)
Frame = +2
Query: 86 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 266 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKM 445
+K + PEEHPVLLTEAPLNPKA KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 446 THIMFPKHFTRPAI 487
T IMF + F PA+
Sbjct: 121 TQIMF-ETFNTPAM 133
Score = 103 bits (247), Expect = 1e-22
Identities = 58/106 (54%), Positives = 65/106 (61%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435
EAQSKRG LTLKYPIEHGIVTNWDDMEKIWHHTFYNEL VAP P P+ +R
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573
EK + +TF TP V IQ VL + R DS G++
Sbjct: 118 EKMTQI-MFETFNTPA-MYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 156 bits (378), Expect = 1e-38
Identities = 82/134 (61%), Positives = 88/134 (65%)
Frame = +2
Query: 86 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 266 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKM 445
+K + PEEHPVLLTEAPLNPKA KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 446 THIMFPKHFTRPAI 487
T IMF + F PA+
Sbjct: 121 TQIMF-ETFNTPAM 133
Score = 103 bits (247), Expect = 1e-22
Identities = 58/106 (54%), Positives = 65/106 (61%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435
EAQSKRG LTLKYPIEHGIVTNWDDMEKIWHHTFYNEL VAP P P+ +R
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573
EK + +TF TP V IQ VL + R DS G++
Sbjct: 118 EKMTQI-MFETFNTPA-MYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 156 bits (378), Expect = 1e-38
Identities = 82/134 (61%), Positives = 88/134 (65%)
Frame = +2
Query: 86 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 266 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKM 445
+K + PEEHPVLLTEAPLNPKA KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 446 THIMFPKHFTRPAI 487
T IMF + F PA+
Sbjct: 121 TQIMF-ETFNTPAM 133
Score = 103 bits (247), Expect = 1e-22
Identities = 58/106 (54%), Positives = 65/106 (61%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435
EAQSKRG LTLKYPIEHGIVTNWDDMEKIWHHTFYNEL VAP P P+ +R
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573
EK + +TF TP V IQ VL + R DS G++
Sbjct: 118 EKMTQI-MFETFNTPA-MYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 156 bits (378), Expect = 1e-38
Identities = 82/134 (61%), Positives = 88/134 (65%)
Frame = +2
Query: 86 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 266 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKM 445
+K + PEEHPVLLTEAPLNPKA KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 446 THIMFPKHFTRPAI 487
T IMF + F PA+
Sbjct: 121 TQIMF-ETFNTPAM 133
Score = 103 bits (247), Expect = 1e-22
Identities = 58/106 (54%), Positives = 65/106 (61%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435
EAQSKRG LTLKYPIEHGIVTNWDDMEKIWHHTFYNEL VAP P P+ +R
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573
EK + +TF TP V IQ VL + R DS G++
Sbjct: 118 EKMTQI-MFETFNTPA-MYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 155 bits (375), Expect = 3e-38
Identities = 81/134 (60%), Positives = 88/134 (65%)
Frame = +2
Query: 86 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHR 265
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 266 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKM 445
+K + PEEHPVLLTEAPLNPKA KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 446 THIMFPKHFTRPAI 487
T IMF + F PA+
Sbjct: 121 TQIMF-ETFNTPAM 133
Score = 103 bits (246), Expect = 1e-22
Identities = 58/106 (54%), Positives = 65/106 (61%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435
EAQSKRG LTLKYPIEHGIVTNWDDMEKIWHHTFYNEL VAP P P+ +R
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573
EK + +TF TP V IQ VL + R DS G++
Sbjct: 118 EKMTQI-MFETFNTPA-MYVAIQAVLSLYASGRTTGIVLDSGDGVT 161
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 153 bits (371), Expect = 9e-38
Identities = 79/134 (58%), Positives = 88/134 (65%)
Frame = +2
Query: 86 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHR 265
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 266 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKM 445
+K + PEEHPVLLTEAPLNPKA KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 446 THIMFPKHFTRPAI 487
T IMF + F PA+
Sbjct: 121 TQIMF-ETFNTPAM 133
Score = 103 bits (246), Expect = 1e-22
Identities = 58/106 (54%), Positives = 65/106 (61%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435
EAQSKRG LTLKYPIEHGIVTNWDDMEKIWHHTFYNEL VAP P P+ +R
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573
EK + +TF TP V IQ VL + R DS G++
Sbjct: 118 EKMTQI-MFETFNTPA-MYVAIQAVLSLYASGRTTGIVLDSGDGVT 161
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 148 bits (359), Expect = 3e-36
Identities = 78/132 (59%), Positives = 86/132 (65%)
Frame = +2
Query: 92 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAK 271
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 272 XXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTH 451
+ PEEHPVLLTEAPLNPK+ KMT
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 452 IMFPKHFTRPAI 487
IMF + F PA+
Sbjct: 122 IMF-ETFNTPAM 132
Score = 102 bits (244), Expect = 2e-22
Identities = 54/93 (58%), Positives = 60/93 (64%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435
EAQSKRG LTLKYPIEHGIVTNWDDMEKIWHHTFYNEL +AP P P+ +R
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNR 116
Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFR 534
EK + +TF TP V IQ VL + R
Sbjct: 117 EKMTQI-MFETFNTPA-MYVNIQAVLSLYASGR 147
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +2
Query: 86 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 266 AK 271
+K
Sbjct: 61 SK 62
Score = 64.5 bits (150), Expect = 6e-11
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKI 342
EAQSKRG LTLKYPIEHGIVTNWDDMEKI
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 123 bits (296), Expect = 1e-28
Identities = 56/62 (90%), Positives = 59/62 (95%)
Frame = +2
Query: 86 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHR 265
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 266 AK 271
+K
Sbjct: 61 SK 62
Score = 64.5 bits (150), Expect = 6e-11
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKI 342
EAQSKRG LTLKYPIEHGIVTNWDDMEKI
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 122 bits (293), Expect = 3e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +2
Query: 86 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHR 265
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 266 AK 271
+K
Sbjct: 61 SK 62
Score = 64.5 bits (150), Expect = 6e-11
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKI 342
EAQSKRG LTLKYPIEHGIVTNWDDMEKI
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 122 bits (293), Expect = 3e-28
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +2
Query: 86 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHR 265
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 266 AK 271
+K
Sbjct: 61 SK 62
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDM 333
EAQSKRG LTLKYPIEHGIVTNWDDM
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDM 83
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 117 bits (282), Expect = 6e-27
Identities = 64/116 (55%), Positives = 70/116 (60%)
Frame = +2
Query: 140 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKXXXXXXXXXXXXXXXL 319
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG ++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 320 TGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHIMFPKHFTRPAI 487
+ PEEHPVLLTEAPLNPKA KMT IMF + F PA+
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF-ETFNTPAM 119
Score = 103 bits (247), Expect = 1e-22
Identities = 58/106 (54%), Positives = 65/106 (61%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435
EAQSKRG LTLKYPIEHGIVTNWDDMEKIWHHTFYNEL VAP P P+ +R
Sbjct: 44 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 103
Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573
EK + +TF TP V IQ VL + R DS G++
Sbjct: 104 EKMTQI-MFETFNTPA-MYVAIQAVLSLYASGRTTGVVLDSGDGVT 147
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 103 bits (247), Expect = 1e-22
Identities = 58/106 (54%), Positives = 65/106 (61%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435
EAQSKRG LTLKYPIEHGIVTNWDDMEKIWHHTFYNEL VAP P P+ +R
Sbjct: 14 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 73
Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573
EK + +TF TP V IQ VL + R DS G++
Sbjct: 74 EKMTQI-MFETFNTPA-MYVAIQAVLSLYASGRTTGVVLDSGDGVT 117
Score = 63.3 bits (147), Expect = 1e-10
Identities = 39/90 (43%), Positives = 44/90 (48%)
Frame = +2
Query: 218 MVGMGQKDSYVGVRHRAKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPV 397
MVGMGQKDSYVG ++K + PEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 398 LLTEAPLNPKATERKMTHIMFPKHFTRPAI 487
LLTEAPLNPKA KMT IMF + F PA+
Sbjct: 61 LLTEAPLNPKANREKMTQIMF-ETFNTPAM 89
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 71.7 bits (168), Expect = 4e-13
Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = +2
Query: 110 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKXXXXXX 289
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G + +
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 290 XXXXXXXXXLTGMTWRR-FGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHIMFPK 466
+ + I PEEHPVLLT+APLNP + I F +
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFF-E 129
Query: 467 HFTRPAI 487
F PA+
Sbjct: 130 TFNVPAL 136
Score = 58.4 bits (135), Expect = 4e-09
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Frame = +1
Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTF-YNELGVAPRGTPSPAH*GSPQPQGH 432
+A+S RG +++YP+EHGIV NW DMEKIW + F ++L + P P P +
Sbjct: 60 KAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKN 119
Query: 433 REKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573
RE+ +TF P + +Q VL + R DS G++
Sbjct: 120 RERSAEIFF-ETFNVPA-LYIQMQAVLSLYATGRTTGVVLDSGDGVT 164
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 56.4 bits (130), Expect = 1e-08
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Frame = +2
Query: 110 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVG-----VRHRA 268
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG +R
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 269 KXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMT 448
+ + FG P + P+E +LLTE PLNP + KM
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFG--PEKLD--IDPKECKLLLTEPPLNPNSNREKMF 124
Query: 449 HIMFPKH 469
+MF ++
Sbjct: 125 QVMFEQY 131
Score = 51.6 bits (118), Expect = 4e-07
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = +1
Query: 214 RDGRYGTEGLLCRSEAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LGVAPRGT 390
R G + L+ E R L + YP+++GIV NWDDM +W HTF E L + P+
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 391 PSPAH*GSPQPQGHREKDDPYHVSKTFYTPRHCSVGIQTVLLAF 522
P +REK + V Y V +Q VL +
Sbjct: 106 KLLLTEPPLNPNSNREK--MFQVMFEQYGFNSIYVAVQAVLTLY 147
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 283 TLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAP 381
T+KYPI HGIV +WD ME+ W + L P
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEP 112
Score = 36.7 bits (81), Expect = 0.013
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 86 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 193
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 380 PEEHPVLLTEAPLNPKATERKMTHIMFPKHFTRPAI 487
PE+H LLTE PLN IMF + F P +
Sbjct: 112 PEDHFFLLTEPPLNTPENREYTAEIMF-ESFNVPGL 146
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 374 SPPEEHPVLLTEAPLNPKATERKMTHIMFPKHFTRPA 484
S P EHPVL +E+ N +A K+T IMF K F PA
Sbjct: 119 SNPSEHPVLFSESSWNDRARREKLTEIMFEK-FQVPA 154
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 193
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.067
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 295 PIEHGIVTNWDDMEKIWHHTF 357
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.067
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 295 PIEHGIVTNWDDMEKIWHHTF 357
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 350 IPSTMSWVSPPEEHPVLLTEAPL-NPKATERKMTHIMF 460
+ S S VS P +HP + E P+ PKA + K +I+F
Sbjct: 1422 VQSQTSSVSTPPQHPSISAEMPIMTPKAVKSKSGYILF 1459
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 350 IPSTMSWVSPPEEHPVLLTEAPL-NPKATERKMTHIMF 460
+ S S VS P +HP + E P+ PKA + K +I+F
Sbjct: 1422 VQSQTSSVSTPPQHPSISAEMPIMTPKAVKSKSGYILF 1459
>Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical
protein C26C6.1b protein.
Length = 513
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 350 IPSTMSWVSPPEEHPVLLTEAPL-NPKATERKMTHIMF 460
+ S S VS P +HP + E P+ PKA + K +I+F
Sbjct: 52 VQSQTSSVSTPPQHPSISAEMPIMTPKAVKSKSGYILF 89
>Z47356-8|CAD27185.1| 477|Caenorhabditis elegans Hypothetical
protein E02H1.7 protein.
Length = 477
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 369 GCRPPRNTQSCSLRLPSTPRPQRE 440
GCR R+ SCS P+ PRPQ E
Sbjct: 158 GCRRIRSRPSCSTSTPTPPRPQVE 181
>Z47075-8|CAA87381.2| 477|Caenorhabditis elegans Hypothetical
protein E02H1.7 protein.
Length = 477
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 369 GCRPPRNTQSCSLRLPSTPRPQRE 440
GCR R+ SCS P+ PRPQ E
Sbjct: 158 GCRRIRSRPSCSTSTPTPPRPQVE 181
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 190 RGKAPPSGRDGRYGTEGLLCRSEAQSKRG 276
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 382 RGTPSPAH*GSPQPQGHREKDDPYH 456
RG P PAH G P GH + P H
Sbjct: 111 RGAPPPAHHGHFGPPGHHFQGPPQH 135
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 140 KAGFAGDDAPRAVFPSIVGRPRHQG 214
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 165 ASSPAKPALHIPEPLSTTNAATSS 94
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 165 ASSPAKPALHIPEPLSTTNAATSS 94
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 165 ASSPAKPALHIPEPLSTTNAATSS 94
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 165 ASSPAKPALHIPEPLSTTNAATSS 94
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,563,598
Number of Sequences: 27780
Number of extensions: 420793
Number of successful extensions: 1490
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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