BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0006 (600 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 132 2e-31 At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 132 2e-31 At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 132 2e-31 At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 131 3e-31 At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 131 3e-31 At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 131 3e-31 At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 128 4e-30 At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 128 4e-30 At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 128 4e-30 At2g42100.1 68415.m05205 actin, putative very strong similarity ... 123 1e-28 At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 87 8e-18 At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 83 1e-16 At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 57 8e-09 At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 1e-08 At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 56 2e-08 At3g12380.1 68416.m01543 actin/actin-like family protein similar... 47 8e-06 At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 40 0.001 At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.083 At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 33 0.19 At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 31 0.58 At2g05290.1 68415.m00557 expressed protein similar to zinc finge... 30 1.0 At1g16690.2 68414.m01999 transcription factor-related similar to... 30 1.3 At1g16690.1 68414.m01998 transcription factor-related similar to... 30 1.3 At4g05360.1 68417.m00818 zinc knuckle (CCHC-type) family protein... 29 1.8 At3g61300.1 68416.m06860 C2 domain-containing protein anthranila... 29 1.8 At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 4.1 At5g57320.1 68418.m07160 villin, putative similar to villin 2 (V... 28 5.4 At5g02330.1 68418.m00156 DC1 domain-containing protein contains ... 28 5.4 At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.2 At2g47500.1 68415.m05929 kinesin motor protein-related 27 7.2 At5g53240.1 68418.m06618 expressed protein contains Pfam profile... 27 9.5 At5g52930.1 68418.m06568 expressed protein contains Pfam profile... 27 9.5 At4g00700.1 68417.m00096 C2 domain-containing protein contains I... 27 9.5 At3g24460.1 68416.m03069 TMS membrane family protein / tumour di... 27 9.5 >At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496 Actin 11 {Arabidopsis thaliana} Length = 377 Score = 132 bits (319), Expect = 2e-31 Identities = 71/131 (54%), Positives = 80/131 (61%) Frame = +2 Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKX 274 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64 Query: 275 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHI 454 + PEEHPVLLTEAPLNPKA KMT I Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124 Query: 455 MFPKHFTRPAI 487 MF + F PA+ Sbjct: 125 MF-ETFNTPAM 134 Score = 102 bits (245), Expect = 2e-22 Identities = 58/106 (54%), Positives = 65/106 (61%) Frame = +1 Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435 EAQSKRG LTLKYPIEHGIV+NWDDMEKIWHHTFYNEL VAP P P+ +R Sbjct: 59 EAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118 Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573 EK + +TF TP V IQ VL + R DS G+S Sbjct: 119 EKMTQI-MFETFNTPA-MYVAIQAVLSLYASGRTTGIVLDSGDGVS 162 >At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 Actin 4 {Arabidopsis thaliana} Length = 377 Score = 132 bits (318), Expect = 2e-31 Identities = 71/131 (54%), Positives = 80/131 (61%) Frame = +2 Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKX 274 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64 Query: 275 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHI 454 + PEEHPVLLTEAPLNPKA KMT I Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124 Query: 455 MFPKHFTRPAI 487 MF + F PA+ Sbjct: 125 MF-ETFNTPAM 134 Score = 102 bits (244), Expect = 2e-22 Identities = 58/106 (54%), Positives = 64/106 (60%) Frame = +1 Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435 EAQSKRG LTLKYPIEHGIV NWDDMEKIWHHTFYNEL VAP P P+ +R Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118 Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573 EK + +TF TP V IQ VL + R DS G+S Sbjct: 119 EKMTQI-MFETFNTPA-MYVAIQAVLSLYASGRTTGIVLDSGDGVS 162 >At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497 Actin 12 {Arabidopsis thaliana} Length = 377 Score = 132 bits (318), Expect = 2e-31 Identities = 71/131 (54%), Positives = 80/131 (61%) Frame = +2 Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKX 274 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64 Query: 275 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHI 454 + PEEHPVLLTEAPLNPKA KMT I Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124 Query: 455 MFPKHFTRPAI 487 MF + F PA+ Sbjct: 125 MF-ETFNTPAM 134 Score = 102 bits (244), Expect = 2e-22 Identities = 58/106 (54%), Positives = 64/106 (60%) Frame = +1 Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435 EAQSKRG LTLKYPIEHGIV NWDDMEKIWHHTFYNEL VAP P P+ +R Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118 Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573 EK + +TF TP V IQ VL + R DS G+S Sbjct: 119 EKMTQI-MFETFNTPA-MYVAIQAVLSLYASGRTTGIVLDSGDGVS 162 >At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana} Length = 377 Score = 131 bits (317), Expect = 3e-31 Identities = 71/131 (54%), Positives = 80/131 (61%) Frame = +2 Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKX 274 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64 Query: 275 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHI 454 + PEEHPVLLTEAPLNPKA KMT I Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124 Query: 455 MFPKHFTRPAI 487 MF + F PA+ Sbjct: 125 MF-ETFNVPAM 134 Score = 100 bits (240), Expect = 6e-22 Identities = 57/106 (53%), Positives = 64/106 (60%) Frame = +1 Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435 EAQSKRG LTLKYPIEHGIV+NWDDMEKIWHHTFYNEL VAP P P+ +R Sbjct: 59 EAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 118 Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573 EK + +TF P V IQ VL + R DS G+S Sbjct: 119 EKMTQI-MFETFNVPA-MYVAIQAVLSLYASGRTTGIVLDSGDGVS 162 >At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 Actin 3 {Arabidopsis thaliana}; supported by full-length cDNA: Ceres: 19581. Length = 377 Score = 131 bits (317), Expect = 3e-31 Identities = 70/131 (53%), Positives = 80/131 (61%) Frame = +2 Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKX 274 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64 Query: 275 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHI 454 + PEEHP+LLTEAPLNPKA KMT I Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124 Query: 455 MFPKHFTRPAI 487 MF + F PA+ Sbjct: 125 MF-ETFNAPAM 134 Score = 100 bits (239), Expect = 8e-22 Identities = 57/106 (53%), Positives = 63/106 (59%) Frame = +1 Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435 EAQSKRG LTLKYPIEHGIV NWDDMEKIWHHTFYNEL VAP P P+ +R Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118 Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573 EK + +TF P V IQ VL + R DS G+S Sbjct: 119 EKMTQI-MFETFNAPA-MYVAIQAVLSLYASGRTTGIVLDSGDGVS 162 >At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 Actin 1 (Actin 3) {Arabidopsis thaliana} Length = 377 Score = 131 bits (317), Expect = 3e-31 Identities = 70/131 (53%), Positives = 80/131 (61%) Frame = +2 Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKX 274 E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVG ++K Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64 Query: 275 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHI 454 + PEEHP+LLTEAPLNPKA KMT I Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124 Query: 455 MFPKHFTRPAI 487 MF + F PA+ Sbjct: 125 MF-ETFNAPAM 134 Score = 100 bits (239), Expect = 8e-22 Identities = 57/106 (53%), Positives = 63/106 (59%) Frame = +1 Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435 EAQSKRG LTLKYPIEHGIV NWDDMEKIWHHTFYNEL VAP P P+ +R Sbjct: 59 EAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR 118 Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573 EK + +TF P V IQ VL + R DS G+S Sbjct: 119 EKMTQI-MFETFNAPA-MYVAIQAVLSLYASGRTTGIVLDSGDGVS 162 >At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 Length = 377 Score = 128 bits (308), Expect = 4e-30 Identities = 67/131 (51%), Positives = 79/131 (60%) Frame = +2 Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKX 274 +++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64 Query: 275 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHI 454 + PEEHPVLLTEAPLNPKA KMT I Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124 Query: 455 MFPKHFTRPAI 487 MF + F PA+ Sbjct: 125 MF-ETFNSPAM 134 Score = 100 bits (239), Expect = 8e-22 Identities = 55/106 (51%), Positives = 65/106 (61%) Frame = +1 Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435 EAQSKRG LTLKYPIEHG+V+NWDDMEKIWHHTFYNEL +AP P P+ +R Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118 Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573 EK + +TF +P V IQ VL + R DS G+S Sbjct: 119 EKMTQI-MFETFNSPA-MYVAIQAVLSLYASGRTTGIVLDSGDGVS 162 >At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and to At1g49240 Length = 371 Score = 128 bits (308), Expect = 4e-30 Identities = 67/131 (51%), Positives = 79/131 (60%) Frame = +2 Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKX 274 +++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64 Query: 275 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHI 454 + PEEHPVLLTEAPLNPKA KMT I Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124 Query: 455 MFPKHFTRPAI 487 MF + F PA+ Sbjct: 125 MF-ETFNSPAM 134 Score = 100 bits (239), Expect = 8e-22 Identities = 55/106 (51%), Positives = 65/106 (61%) Frame = +1 Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435 EAQSKRG LTLKYPIEHG+V+NWDDMEKIWHHTFYNEL +AP P P+ +R Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118 Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573 EK + +TF +P V IQ VL + R DS G+S Sbjct: 119 EKMTQI-MFETFNSPA-MYVAIQAVLSLYASGRTTGIVLDSGDGVS 162 >At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 Actin 8 {Arabidopsis thaliana}; nearly identical to SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and to At3g18780 Length = 377 Score = 128 bits (308), Expect = 4e-30 Identities = 67/131 (51%), Positives = 79/131 (60%) Frame = +2 Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKX 274 +++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVG ++K Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64 Query: 275 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHI 454 + PEEHPVLLTEAPLNPKA KMT I Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124 Query: 455 MFPKHFTRPAI 487 MF + F PA+ Sbjct: 125 MF-ETFNSPAM 134 Score = 100 bits (239), Expect = 8e-22 Identities = 55/106 (51%), Positives = 65/106 (61%) Frame = +1 Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435 EAQSKRG LTLKYPIEHG+V+NWDDMEKIWHHTFYNEL +AP P P+ +R Sbjct: 59 EAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANR 118 Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573 EK + +TF +P V IQ VL + R DS G+S Sbjct: 119 EKMTQI-MFETFNSPA-MYVAIQAVLSLYASGRTTGIVLDSGDGVS 162 >At2g42100.1 68415.m05205 actin, putative very strong similarity to SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493 Actin 3 {Arabidopsis thaliana}; contains Pfam profile PF00022: Actin Length = 378 Score = 123 bits (296), Expect = 1e-28 Identities = 64/131 (48%), Positives = 79/131 (60%) Frame = +2 Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKX 274 +E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VG +A+ Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65 Query: 275 XXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHI 454 + PEEHP+LLTEAPLNPK KMT I Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125 Query: 455 MFPKHFTRPAI 487 MF + F P++ Sbjct: 126 MF-ESFAFPSM 135 Score = 91.9 bits (218), Expect = 3e-19 Identities = 50/106 (47%), Positives = 65/106 (61%) Frame = +1 Query: 256 EAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQPQGHR 435 EAQ++RG L+LKYPIEHG+V+NWDDMEKIWHHTFYNEL + P P P+ +R Sbjct: 60 EAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNR 119 Query: 436 EKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573 EK + ++F P +GIQ VL ++ R DS G+S Sbjct: 120 EKMTQI-MFESFAFP-SMYIGIQAVLSLYSSGRTTGIVLDSGDGVS 163 >At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin 11 {Arabidopsis thaliana}; contains Pfam profile PF00022: Actin Length = 366 Score = 87.0 bits (206), Expect = 8e-18 Identities = 53/129 (41%), Positives = 63/129 (48%) Frame = +2 Query: 110 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKXXXXXX 289 +V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG A Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58 Query: 290 XXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHIMFPKH 469 + PEEHPVLLTEAP NPKA KMT IMF + Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMF-ES 117 Query: 470 FTRPAIVPS 496 F PA+ S Sbjct: 118 FDVPAMYVS 126 Score = 78.2 bits (184), Expect = 4e-15 Identities = 46/107 (42%), Positives = 59/107 (55%) Frame = +1 Query: 214 RDGRYGTEGLLCRSEAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTP 393 RDG E + E + R LTLK P+EHGIV NWDDMEKIWH+TFYNEL V P P Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93 Query: 394 SPAH*GSPQPQGHREKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFR 534 P+ +REK + ++F P V +Q+VL ++ R Sbjct: 94 VLLTEAPYNPKANREKMTQI-MFESFDVPA-MYVSMQSVLYLYSSGR 138 >At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Arabidopsis thaliana] gi|9293903|dbj|BAB01806 Length = 329 Score = 83.0 bits (196), Expect = 1e-16 Identities = 46/111 (41%), Positives = 61/111 (54%) Frame = +1 Query: 241 LLCRSEAQSKRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTPSPAH*GSPQ 420 L +A+++ G LTL YP+EHG+V+NWDDMEKIW+HTFY+EL VAP P Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68 Query: 421 PQGHREKDDPYHVSKTFYTPRHCSVGIQTVLLAFTPFRGRYPTRDSRLGLS 573 P+ REK + +TF P +G+Q L R DS G+S Sbjct: 69 PKADREKMTQI-MFETFAVP-SMYIGMQAALSLHASGRTTGTVLDSGDGVS 117 >At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical to actin-related protein 5 (ARP5) GI:21489922 from [Arabidopsis thaliana] Length = 145 Score = 57.2 bits (132), Expect = 8e-09 Identities = 24/34 (70%), Positives = 31/34 (91%) Frame = +2 Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 196 +EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38 Score = 38.7 bits (86), Expect = 0.003 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Frame = +1 Query: 217 DGRYGTEGLLCRSEAQS-KRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTP 393 D G L S+A + +R + + P + GIVT+WD ++ +W H F N L + P P Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120 Score = 27.9 bits (59), Expect = 5.4 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +2 Query: 380 PEEHPVLLTEAPLNPKATERK 442 P EHP+LL E PLN + K Sbjct: 116 PTEHPMLLAEPPLNSQQQREK 136 >At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary identical to actin-related protein 4 (ARP4) [Arabidopsis thaliana] GI:21427463; contains Pfam profile PF00022: Actin; supporting cDNA gi|21427462|gb|AF507912.1| Length = 441 Score = 56.8 bits (131), Expect = 1e-08 Identities = 23/34 (67%), Positives = 31/34 (91%) Frame = +2 Query: 95 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 196 +EV+A+VVD GS CKAG+AG+DAP+AVFPS++G Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38 Score = 37.9 bits (84), Expect = 0.005 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = +1 Query: 253 SEAQS-KRGFLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPRGTP 393 S+A S +R + + PI+ GIV++WD ++ IW H F + L + P P Sbjct: 79 SQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHP 126 Score = 35.1 bits (77), Expect = 0.036 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +2 Query: 380 PEEHPVLLTEAPLNPKATERKMTHIMFPKH 469 P EHP+LL E PLN + K +MF K+ Sbjct: 122 PTEHPMLLAEPPLNTQQQREKAAELMFEKY 151 >At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly identical to actin-related protein 2 (ARP2) [Arabidopsis thaliana] GI:3818624; contains Pfam profile PF00022: Actin Length = 389 Score = 56.0 bits (129), Expect = 2e-08 Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 7/127 (5%) Frame = +2 Query: 110 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVG-----VRHRA 268 +V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG +RH+ Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66 Query: 269 KXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMT 448 + + W ++ P + +LLT+ PLNP KM Sbjct: 67 DINYPVHNGIVQNWDDMEHV-WDHAFYNELKIN----PSDCKILLTDPPLNPSKNREKMI 121 Query: 449 HIMFPKH 469 MF K+ Sbjct: 122 ETMFEKY 128 Score = 56.0 bits (129), Expect = 2e-08 Identities = 20/34 (58%), Positives = 25/34 (73%) Frame = +1 Query: 280 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAP 381 L + YP+ +GIV NWDDME +W H FYNEL + P Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINP 99 >At3g12380.1 68416.m01543 actin/actin-like family protein similar to SP|P53946 Actin-like protein ARP5 {Saccharomyces cerevisiae}; contains Pfam profile PF00022: Actin Length = 724 Score = 47.2 bits (107), Expect = 8e-06 Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 10/149 (6%) Frame = +2 Query: 110 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGVRHRAKXXXXXX 289 +V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VG + Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77 Query: 290 XXXXXXXXXLTGMTWRRFGIIPSTMSWV-------SPPEEHPVLLTEAPLNPKATERKMT 448 + + + +F I+ + + +HP+L+TE NP + KM Sbjct: 78 TRSGPRSPFDSNVVY-QFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMA 136 Query: 449 HIMFPKHFTRPAI---VPSAFKPCFLLLH 526 ++F + + PA+ V +AF + LH Sbjct: 137 ELLF-ETYGVPAVAFGVDAAFSYKYNQLH 164 >At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical to actin-related protein 3 (ARP3) [Arabidopsis thaliana] GI:21427461; contains Pfam profile PF00022: Actin Length = 427 Score = 40.3 bits (90), Expect = 0.001 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +1 Query: 286 LKYPIEHGIVTNWDDMEKIWHHTFYNELGVAP 381 L YPIEHG V +WD ME+ W +N L P Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDP 117 Score = 35.9 bits (79), Expect = 0.020 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = +2 Query: 107 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 193 A+V+DNG+G K GFAG+ P + P++V Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36 Score = 28.7 bits (61), Expect = 3.1 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +2 Query: 380 PEEHPVLLTEAPLNPKATERKMTHIMF 460 PE+H LLTE+PL P + I+F Sbjct: 117 PEDHYFLLTESPLTPPESREYTGEILF 143 >At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase family protein similar to laccase [Pinus taeda][GI:13661201], lac110 laccase, Populus trichocarpa, EMBL:PTY13773 Length = 584 Score = 33.9 bits (74), Expect = 0.083 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = -1 Query: 231 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 94 P P I P RGL +G T+ +SSPA+P + +P +ST + TS+ Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332 >At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly identical to actin-related protein 6 (ARP6) [Arabidopsis thaliana] GI:21427467; contains Pfam profile PF00022: Actin Length = 421 Score = 32.7 bits (71), Expect = 0.19 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +2 Query: 110 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 202 +V+DNG G+ KAG G+ P V P+ + +P Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35 Score = 29.9 bits (64), Expect = 1.3 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +1 Query: 286 LKYPIEHGIVTNWDDMEKIWHHTFYNELGVAP 381 ++ PI+ G + N D +IW H F + L +AP Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAP 92 >At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical to actin-related protein 7 (ARP7) [Arabidopsis thaliana] GI:21427469; contains Pfam profile PF00022: Actin Length = 363 Score = 31.1 bits (67), Expect = 0.58 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +1 Query: 295 PIEHGIVTNWDDMEKIWHHTFYNELG 372 PIE G++ +WD ME + + Y LG Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLG 82 Score = 27.5 bits (58), Expect = 7.2 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +2 Query: 107 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 199 ALVVD GS KAG A D +P + PS + R Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34 >At2g05290.1 68415.m00557 expressed protein similar to zinc finger protein [Arabidopsis thaliana] GI:976277 Length = 383 Score = 30.3 bits (65), Expect = 1.0 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = -2 Query: 311 IPCSMGYLRVRKPLLLCASLLHKSPSVPYRPS 216 + + Y R+RK C L H+ P PY PS Sbjct: 193 VKIGIDYERIRKRCFQCQRLTHEKPRCPYLPS 224 >At1g16690.2 68414.m01999 transcription factor-related similar to enhancer of polycomb (GI:11907923)[Homo sapiens] Length = 439 Score = 29.9 bits (64), Expect = 1.3 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Frame = +1 Query: 277 FLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPR-GTPSPAH*GSPQPQGHR 435 +L++KY + H I + W + +IW L P +P + P+ + HR Sbjct: 177 YLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPPPVNDTNPYNVFRPREKAHR 230 >At1g16690.1 68414.m01998 transcription factor-related similar to enhancer of polycomb (GI:11907923)[Homo sapiens] Length = 439 Score = 29.9 bits (64), Expect = 1.3 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Frame = +1 Query: 277 FLTLKYPIEHGIVTNWDDMEKIWHHTFYNELGVAPR-GTPSPAH*GSPQPQGHR 435 +L++KY + H I + W + +IW L P +P + P+ + HR Sbjct: 177 YLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPPPVNDTNPYNVFRPREKAHR 230 >At4g05360.1 68417.m00818 zinc knuckle (CCHC-type) family protein contains Pfam domain, PF00098: Zinc knuckle Length = 735 Score = 29.5 bits (63), Expect = 1.8 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -3 Query: 517 QEARFECRRNNGGACKMFWKHDMGHLSLCGLGVEGSLSEQDWVFLGG 377 +E + R N G K+ +G CGLG +G+ S+ D VF+ G Sbjct: 527 EETQKNLRMLNNGTKKLGHILSIGKTDKCGLGFKGNPSKSDPVFVYG 573 >At3g61300.1 68416.m06860 C2 domain-containing protein anthranilate phosphoribosyltransferase (fragment) - Pisum sativum, PIR:T06460 Length = 972 Score = 29.5 bits (63), Expect = 1.8 Identities = 22/81 (27%), Positives = 31/81 (38%) Frame = +1 Query: 343 WHHTFYNELGVAPRGTPSPAH*GSPQPQGHREKDDPYHVSKTFYTPRHCSVGIQTVLLAF 522 +H+ NE +PRG P PQ P S + PR I T + F Sbjct: 158 FHNIPTNESNHSPRGNQQSFQPQPPPPQSQTALPPPMMESSLYQAPRF-GTPIPTT-MGF 215 Query: 523 TPFRGRYPTRDSRLGLSGGNR 585 P Y ++++ L GG R Sbjct: 216 NPNPPDYSIKETKPILGGGKR 236 >At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, putative / 3-PGDH, putative similar to SP:O04130 from [Arabidopsis thaliana] Length = 588 Score = 28.3 bits (60), Expect = 4.1 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = -2 Query: 341 IFSMSSQLVTIPCSMGYLRVRKPLLLCAS 255 IFS SS+LVT P S+ +R R+ ++L S Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTS 38 >At5g57320.1 68418.m07160 villin, putative similar to villin 2 (VLN2) [Arabidopsis thaliana] GI:3415115, villin 3 (VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam profiles PF00626: Gelsolin repeat, PF02209: Villin headpiece domain Length = 962 Score = 27.9 bits (59), Expect = 5.4 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%) Frame = -3 Query: 418 EGSLSEQDWVFLGGR--HPAHCRRYDAKSSP 332 EGS SEQ W LGG+ +P+ + D +S P Sbjct: 594 EGSESEQFWELLGGKSEYPSQKIKRDGESDP 624 >At5g02330.1 68418.m00156 DC1 domain-containing protein contains Pfam profile PF03107: DC1 domain Length = 656 Score = 27.9 bits (59), Expect = 5.4 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 13/75 (17%) Frame = -2 Query: 338 FSMSSQL-VTIPCSMG--------YLRVRKPLLLCASLLHKSPSVPYRPSR--PDGGA-- 198 +++SSQ T P S G +L +++PL LC SL K+ + Y S P + Sbjct: 22 YTLSSQTDTTTPSSSGETAIDGDDHLSLQQPLFLCPSLRLKADEINYSYSEILPFNISPY 81 Query: 197 FPRSRGTRREEHHLL 153 FP RG ++ HLL Sbjct: 82 FPSIRGADQQVQHLL 96 >At5g06610.1 68418.m00747 expressed protein contains Pfam profile PF04788: Protein of unknown function (DUF620) Length = 368 Score = 27.5 bits (58), Expect = 7.2 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = -1 Query: 207 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 85 WR P + + A+GA P + AL +PL+ ++ +S+ + Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207 >At2g47500.1 68415.m05929 kinesin motor protein-related Length = 974 Score = 27.5 bits (58), Expect = 7.2 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -2 Query: 260 ASLLHKSPSVPYRPSR 213 ASL HK+P VPYR S+ Sbjct: 656 ASLAHKNPHVPYRNSK 671 >At5g53240.1 68418.m06618 expressed protein contains Pfam profile PF03478: Protein of unknown function (DUF295) Length = 361 Score = 27.1 bits (57), Expect = 9.5 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = +2 Query: 344 GIIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHIMFPKHFTRP 481 G I S+ WV ++ +L + LNP A+E I P T P Sbjct: 75 GTIGSSHGWVVTLKDDGILRLQDDLNPVASETDPKRISLPPLVTLP 120 >At5g52930.1 68418.m06568 expressed protein contains Pfam profile PF03478: Protein of unknown function (DUF295); expression supported by MPSS Length = 359 Score = 27.1 bits (57), Expect = 9.5 Identities = 12/45 (26%), Positives = 23/45 (51%) Frame = +2 Query: 347 IIPSTMSWVSPPEEHPVLLTEAPLNPKATERKMTHIMFPKHFTRP 481 +I ++ W++ +E ++ + LNP A++ HI P T P Sbjct: 80 MIGASHGWIATLKEDGIMRLQDDLNPVASDSDPKHIPLPPLVTLP 124 >At4g00700.1 68417.m00096 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain Length = 1006 Score = 27.1 bits (57), Expect = 9.5 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +1 Query: 235 EGLLCRSEAQSKRGFLTLKYPIE-HGIVTNWDDMEKIWHHTFY 360 +GLL R + S F+ LK+ + T +D +WH FY Sbjct: 14 QGLLQRDKHNSCSPFVELKFDNQIFRATTKHNDPNPVWHECFY 56 >At3g24460.1 68416.m03069 TMS membrane family protein / tumour differentially expressed (TDE) family protein contains Pfam domain, PF03348: TMS membrane protein/tumour differentially expressed protein (TDE) Length = 409 Score = 27.1 bits (57), Expect = 9.5 Identities = 20/55 (36%), Positives = 26/55 (47%) Frame = -1 Query: 543 VTAPKRCKSKKHGLNADGTMAGRVKCFGNMIWVIFLSVALGLRGASVSRTGCSSG 379 VT K CK ++ L DG + + CF +V+FLS LG SR SG Sbjct: 69 VTRFKNCKGGENCLGTDGVLRVSLGCF-LFYFVMFLS-TLGTSKTHSSRDRWHSG 121 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,924,566 Number of Sequences: 28952 Number of extensions: 407502 Number of successful extensions: 1168 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 1106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1154 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1187288784 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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