Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0005
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   1.9  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   3.3  
AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    24   4.4  
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    24   4.4  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   5.8  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   7.7  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   7.7  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   7.7  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 42  GGRIPRERERDRVLFIVT 95
           GGR P E ERDR+  IV+
Sbjct: 367 GGRTPPETERDRLEHIVS 384


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +3

Query: 30  REFGGGRIPRERERDRVLFIVTK 98
           +++ G R+P ER+ +++ FIV +
Sbjct: 364 QQWEGARVPMERDANKLQFIVNE 386


>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 19  PRLAGNSAAGGSREKERETE 78
           P   G S AGGS+  ER+ +
Sbjct: 171 PLTVGRSCAGGSKPSERDVD 190


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 19  PRLAGNSAAGGSREKERETE 78
           P   G S AGGS+  ER+ +
Sbjct: 171 PLTVGRSCAGGSKPSERDVD 190


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 42  GGRIPRERERDRVLFIVTK 98
           GGR P E ER R+  IVT+
Sbjct: 430 GGRAPPETERARLESIVTE 448


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 110 CETSNTKNTIVFLQRAFSSRQPSGGQG 190
           C T+ TK+ +  +Q   + R P GG G
Sbjct: 84  CRTARTKHVVDMIQ---AQRSPRGGPG 107


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 7   TSGSPRLAGNSAAGGSREKERETEYYLLSQNK*TMR 114
           TSG PR AG+S+      K+ + +       K  M+
Sbjct: 65  TSGEPRAAGSSSNSRRNSKQLQRDELAAKMGKHDMK 100


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 7   TSGSPRLAGNSAAGGSREKERETEYYLLSQNK*TMR 114
           TSG PR AG+S+      K+ + +       K  M+
Sbjct: 65  TSGEPRAAGSSSNSRRNSKQLQRDELAAKMGKHDMK 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,202
Number of Sequences: 2352
Number of extensions: 13728
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)