Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0005
(609 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 24 1.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 4.1
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 5.4
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 5.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 5.4
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 5.4
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 5.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 5.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 7.1
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 21 9.4
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 21 9.4
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 9.4
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.8 bits (49), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 55 REKERETEYYLLSQ--NK*TMRNIKYKKYN 138
RE+ER E ++S NK N YK YN
Sbjct: 304 RERERSKESKIISSLSNKTIHNNNNYKNYN 333
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 4.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 116 TSNTKNTIVFLQRAFSSRQPSGGQGPFG 199
TSNT TI+ + SS S +GP G
Sbjct: 93 TSNTSKTIILSNKLESSDDISLFRGPEG 120
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 5.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 TSNTKNTIVFLQRAFSSRQPSGGQGPFG 199
TSNT T++ + SS S +GP G
Sbjct: 93 TSNTSKTVILSDKLESSDDISLFRGPEG 120
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 TSNTKNTIVFLQRAFSSRQPSGGQGPFG 199
TSNT T++ + SS S +GP G
Sbjct: 93 TSNTSKTVILSDKLESSDDISLFRGPEG 120
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 5.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 TSNTKNTIVFLQRAFSSRQPSGGQGPFG 199
TSNT T++ + SS S +GP G
Sbjct: 93 TSNTSKTVILSDKLESSDDISLFRGPEG 120
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 5.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 TSNTKNTIVFLQRAFSSRQPSGGQGPFG 199
TSNT T++ + SS S +GP G
Sbjct: 93 TSNTSKTVILSNKLESSDDISLFRGPEG 120
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 5.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 TSNTKNTIVFLQRAFSSRQPSGGQGPFG 199
TSNT T++ + SS S +GP G
Sbjct: 93 TSNTSKTVILSNKLESSDDISLFRGPEG 120
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 5.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 116 TSNTKNTIVFLQRAFSSRQPSGGQGPFG 199
TSNT T++ + SS S +GP G
Sbjct: 93 TSNTSKTVILSDKLESSDDISLFRGPEG 120
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 7.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 116 TSNTKNTIVFLQRAFSSRQPSGGQGPFG 199
TSNT T + + SS S +GP G
Sbjct: 98 TSNTSKTFILSDKLESSDDTSLFRGPKG 125
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 596 KGSVFFNLMIPERSV 552
KG V+F L+ P R++
Sbjct: 75 KGIVYFELLSPNRTI 89
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 171 NHQVDKDHLETNHINITLTNILLVVG 248
+H VDKD L T + +T + G
Sbjct: 123 DHDVDKDELITGWSAVVITAAICTSG 148
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 182 HLMVVWKRKLFAKR 141
H M W RK+F +R
Sbjct: 330 HKMAPWVRKIFIRR 343
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,878
Number of Sequences: 438
Number of extensions: 4197
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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