Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0004
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 154 4e-38
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 154 4e-38
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 154 4e-38
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 154 4e-38
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 154 4e-38
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 154 4e-38
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 153 1e-37
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 151 3e-37
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 146 9e-36
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 136 2e-32
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 136 2e-32
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 134 4e-32
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 134 4e-32
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 123 1e-28
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 123 1e-28
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 82 4e-16
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 69 4e-12
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 64 8e-11
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 48 4e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 34 0.074
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 34 0.074
AC084158-40|AAM15618.2| 354|Caenorhabditis elegans Hypothetical... 33 0.13
AC084158-39|AAM15616.2| 483|Caenorhabditis elegans Hypothetical... 33 0.13
AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical... 33 0.13
AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical... 33 0.13
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z92812-9|CAM84813.1| 338|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.6
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical... 30 1.6
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 2.1
Z92825-3|CAB07311.1| 531|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 28 4.9
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 28 4.9
Z81470-4|CAB03879.1| 550|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.4
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 8.5
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 8.5
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 8.5
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 8.5
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 8.5
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 154 bits (374), Expect = 4e-38
Identities = 80/131 (61%), Positives = 83/131 (63%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKM 425
SKR + P L P P+A KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTP 458
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 154 bits (374), Expect = 4e-38
Identities = 80/131 (61%), Positives = 83/131 (63%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKM 425
SKR + P L P P+A KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTP 458
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 154 bits (374), Expect = 4e-38
Identities = 80/131 (61%), Positives = 83/131 (63%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKM 425
SKR + P L P P+A KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTP 458
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 154 bits (374), Expect = 4e-38
Identities = 80/131 (61%), Positives = 83/131 (63%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKM 425
SKR + P L P P+A KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTP 458
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 154 bits (374), Expect = 4e-38
Identities = 80/131 (61%), Positives = 83/131 (63%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKM 425
SKR + P L P P+A KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTP 458
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 154 bits (374), Expect = 4e-38
Identities = 80/131 (61%), Positives = 83/131 (63%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKM 425
SKR + P L P P+A KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTP 458
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 153 bits (371), Expect = 1e-37
Identities = 79/131 (60%), Positives = 83/131 (63%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKM 425
SKR + P L P P+A KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTP 458
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 151 bits (367), Expect = 3e-37
Identities = 77/131 (58%), Positives = 83/131 (63%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKRVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKM 425
SKR + P L P P+A KM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 426 TQIMFETFNTP 458
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 146 bits (355), Expect = 9e-36
Identities = 76/129 (58%), Positives = 81/129 (62%)
Frame = +3
Query: 72 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 251
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 252 RVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKMTQ 431
R + P L P P++ KMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 432 IMFETFNTP 458
IMFETFNTP
Sbjct: 122 IMFETFNTP 130
Score = 122 bits (295), Expect = 2e-28
Identities = 52/58 (89%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEA LNPK NREK
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREK 118
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 136 bits (328), Expect = 2e-32
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKI 322
++ ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 136 bits (328), Expect = 2e-32
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKI 322
++ ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 134 bits (325), Expect = 4e-32
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKI 322
++ ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 134 bits (325), Expect = 4e-32
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 245
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 246 SKR 254
SKR
Sbjct: 61 SKR 63
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDM 313
++ ILTLKYPIEHGIVTNWDDM
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 18 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 75
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/87 (42%), Positives = 39/87 (44%)
Frame = +3
Query: 198 MVGMGQKDSYVGDEAQSKRVXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQS 377
MVGMGQKDSYVGDEAQSKR + P
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 378 CLLRLPSTPRATERKMTQIMFETFNTP 458
L P P+A KMTQIMFETFNTP
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTP 87
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 123 bits (296), Expect = 1e-28
Identities = 53/58 (91%), Positives = 55/58 (94%)
Frame = +2
Query: 248 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPK NREK
Sbjct: 48 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 105
Score = 116 bits (278), Expect = 2e-26
Identities = 62/113 (54%), Positives = 65/113 (57%)
Frame = +3
Query: 120 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRVXXXXXXXXXXXXXL 299
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 300 TGMTWRRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKMTQIMFETFNTP 458
+ P L P P+A KMTQIMFETFNTP
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 117
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 81.8 bits (193), Expect = 4e-16
Identities = 33/58 (56%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Frame = +2
Query: 251 KSILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEASLNPKGNREK 421
+ + +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+A LNP NRE+
Sbjct: 65 RGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRER 122
Score = 62.5 bits (145), Expect = 2e-10
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRVXXXX 269
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S R
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 270 XXXXXXXXXLTGMTWRR-FGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKMTQIMFET 446
+ + I P L P P + +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 447 FNTP 458
FN P
Sbjct: 131 FNVP 134
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 68.5 bits (160), Expect = 4e-12
Identities = 30/61 (49%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +2
Query: 242 TEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEASLNPKGNRE 418
++ + +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE LNP NRE
Sbjct: 62 SQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNRE 121
Query: 419 K 421
K
Sbjct: 122 K 122
Score = 52.4 bits (120), Expect = 3e-07
Identities = 39/127 (30%), Positives = 55/127 (43%), Gaps = 7/127 (5%)
Frame = +3
Query: 90 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR--- 254
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 255 -VXXXXXXXXXXXXXLTGMTW-RRFGIIPSTMSCVSPPRNTQSCLLRLPSTPRATERKMT 428
+ W FG P + P+ + L P P + KM
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFG--PEKLDI--DPKECKLLLTEPPLNPNSNREKMF 124
Query: 429 QIMFETF 449
Q+MFE +
Sbjct: 125 QVMFEQY 131
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 64.1 bits (149), Expect = 8e-11
Identities = 28/52 (53%), Positives = 33/52 (63%)
Frame = +2
Query: 263 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNRE 418
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE LN NRE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENRE 131
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 66 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 173
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +2
Query: 278 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKGNREK 421
++ G++ +W+ EKI H++ N L P EHPVL +E+S N + REK
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREK 141
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 75 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 173
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.074
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTF 337
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.074
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 275 PIEHGIVTNWDDMEKIWHHTF 337
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
>AC084158-40|AAM15618.2| 354|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1d protein.
Length = 354
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 354 SPPRNTQSCLLRLPSTPRATERKMTQIMFETFNTPRHVRL---AFKPVLLAVRLPSVPPG 524
+P + CL+ L + T +++ + FN P+H+R FKP + V L P
Sbjct: 158 TPECEAEDCLIELMFIKKWTCKQLDYNICTEFNQPQHLRRLVHMFKPTDITVSL-HFGPY 216
Query: 525 IRAGTSREPVFFHN 566
I + T+ EP HN
Sbjct: 217 IPSATAHEPNSMHN 230
>AC084158-39|AAM15616.2| 483|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1b protein.
Length = 483
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 354 SPPRNTQSCLLRLPSTPRATERKMTQIMFETFNTPRHVRL---AFKPVLLAVRLPSVPPG 524
+P + CL+ L + T +++ + FN P+H+R FKP + V L P
Sbjct: 158 TPECEAEDCLIELMFIKKWTCKQLDYNICTEFNQPQHLRRLVHMFKPTDITVSL-HFGPY 216
Query: 525 IRAGTSREPVFFHN 566
I + T+ EP HN
Sbjct: 217 IPSATAHEPNSMHN 230
>AC084158-38|AAM15617.2| 488|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1c protein.
Length = 488
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 354 SPPRNTQSCLLRLPSTPRATERKMTQIMFETFNTPRHVRL---AFKPVLLAVRLPSVPPG 524
+P + CL+ L + T +++ + FN P+H+R FKP + V L P
Sbjct: 163 TPECEAEDCLIELMFIKKWTCKQLDYNICTEFNQPQHLRRLVHMFKPTDITVSL-HFGPY 221
Query: 525 IRAGTSREPVFFHN 566
I + T+ EP HN
Sbjct: 222 IPSATAHEPNSMHN 235
>AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1a protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +3
Query: 354 SPPRNTQSCLLRLPSTPRATERKMTQIMFETFNTPRHVRL---AFKPVLLAVRLPSVPPG 524
+P + CL+ L + T +++ + FN P+H+R FKP + V L P
Sbjct: 161 TPECEAEDCLIELMFIKKWTCKQLDYNICTEFNQPQHLRRLVHMFKPTDITVSL-HFGPY 219
Query: 525 IRAGTSREPVFFHN 566
I + T+ EP HN
Sbjct: 220 IPSATAHEPNSMHN 233
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -2
Query: 327 CQIFSMSSQLVTIPC-SMGYLRVRILFCSVPHLLHKSPSVP-YRPSRPD 187
CQ+FS QLVT+ SMG ++++++ +P L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>Z92812-9|CAM84813.1| 338|Caenorhabditis elegans Hypothetical
protein T03E6.9 protein.
Length = 338
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = -1
Query: 511 DGRRTARSTGLNAKRTWRGVLNVSNMIWVIFLSVALGVEGSLSKQD-WVFLGGDTQLIV- 338
+ R LN +R + G+L ++++IF+ V + V +L D + G L++
Sbjct: 233 ESRNIVSKETLNMQRNFTGILIYQALVYIIFIIVPVAVISTLFYADIHITDYGLPYLLMI 292
Query: 337 --EGMMPNLLHVIP 302
+G + N++H++P
Sbjct: 293 CSQGTINNMIHIVP 306
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 252 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 97
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 252 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 97
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical
protein Y18D10A.17 protein.
Length = 340
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -3
Query: 620 GNGRGGKVGYPFR*NGARVVEKHR--FPGSPSTNTGWYGRKAYSEK 489
G GRGG GY NG + +HR + G N G Y R Y+ +
Sbjct: 283 GRGRGGNRGYGGYNNGYQHQHQHRGGYNGGYRQNNGGYRRGGYAPR 328
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 253 LLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATS 77
L++ +SS S TITP +G+PT N S+P P + STT A ++
Sbjct: 465 LVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATST 524
Query: 76 SS 71
+S
Sbjct: 525 AS 526
>Z92825-3|CAB07311.1| 531|Caenorhabditis elegans Hypothetical
protein C13C4.5 protein.
Length = 531
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -1
Query: 487 TGLNAKRTWRGVLNVSNMIWVIFLSVALGVEGSLSKQDWVFLGG 356
T N W G++ + M++ I S G G + W+F+ G
Sbjct: 85 TYYNISDAWAGLIQTTFMVFFIIFSPICGFLGDRYNRKWIFVVG 128
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 336 STMSCVSPPRNTQSCLLRLP 395
ST C SP +TQ+C+ RLP
Sbjct: 297 STQVCASPLNSTQTCIPRLP 316
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 336 STMSCVSPPRNTQSCLLRLP 395
ST C SP +TQ+C+ RLP
Sbjct: 297 STQVCASPLNSTQTCIPRLP 316
>Z81470-4|CAB03879.1| 550|Caenorhabditis elegans Hypothetical
protein C14A6.5 protein.
Length = 550
Score = 27.9 bits (59), Expect = 6.4
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -1
Query: 637 VPKTAKEMGVGEKWGIPFGKMGHGLWKNTGSREVPARIPGGT--DGRRTARS-TGLNAKR 467
VP +++ + + + + LW++ G E +PG T DGR++ +S A+R
Sbjct: 315 VPYNERKLCILDGYDFTESRAAQKLWEDGGICEKNGYVPGETEGDGRKSEKSGKTCGARR 374
Query: 466 TWR 458
W+
Sbjct: 375 EWK 377
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 120 KAGFAGDDAPRAVFPSIVGRPRHQG 194
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 170 RGKAPPSGRDGRYGTEG 220
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 145 ASSPAKPALHIPEPLSTTNAATSS 74
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,616,973
Number of Sequences: 27780
Number of extensions: 442542
Number of successful extensions: 1547
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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