Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2112
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    24   3.3  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   4.3  
EF426224-1|ABO26467.1|   94|Anopheles gambiae unknown protein.         23   5.7  
EF426223-1|ABO26466.1|   94|Anopheles gambiae unknown protein.         23   5.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.7  
Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase pr...    23   7.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   10.0 

>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +3

Query: 144 CVHGGLSPEINSLDDIRKLDRFKEPPAFGAMCDLLWSDPLEDLAMKKCRTFLA*LR 311
           C++  +      + ++RK  R KEP   G    + +  PLE +A   CR   A +R
Sbjct: 118 CINRTVLFRAKIIGELRK--RLKEPFTDGDHYQVRYGRPLEPVASPVCRMMRANVR 171


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = +1

Query: 280 KNAEHFSHNSVRGCSYFYSYAACXDFLQRNNLLSIIRAHEASRCWLPECIVKAKQPGFPS 459
           KN +H  H+ +      +   A    ++R +L+S ++  +    W  EC ++ K    P 
Sbjct: 273 KNCQHTWHHRLE-----HRDPAVIGEMKRRDLVSWLKVVDCGIRWTCECCIECKMARSPF 327

Query: 460 P 462
           P
Sbjct: 328 P 328


>EF426224-1|ABO26467.1|   94|Anopheles gambiae unknown protein.
          Length = 94

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 521 YSSLIVIXIQNSLVLRXIVSGLGKP 447
           YS  +V+ + ++ V   + SGLG P
Sbjct: 5   YSCCVVVLLLSATVFSTVSSGLGTP 29


>EF426223-1|ABO26466.1|   94|Anopheles gambiae unknown protein.
          Length = 94

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 521 YSSLIVIXIQNSLVLRXIVSGLGKP 447
           YS  +V+ + ++ V   + SGLG P
Sbjct: 5   YSCCVVVLLLSATVFSTVSSGLGTP 29


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 310  VRGCSYFYSYAACXDFLQRNNLLSIIRAHEAS 405
            VR  SY Y       F++ + L  +I  HE S
Sbjct: 2601 VRVTSYIYKDQQLIGFVRNDKLYGVITDHEGS 2632


>Z49833-1|CAA89994.1|  250|Anopheles gambiae serine proteinase
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 3   NHECRHLTEYFHFQ 44
           N +C + T+YF FQ
Sbjct: 159 NEQCHNQTQYFRFQ 172


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 310  VRGCSYFYSYAACXDFLQRNNLLSIIRAHEAS 405
            VR  SY Y       F++ + L  +I  HE S
Sbjct: 2611 VRVTSYIYKDQQLIVFVRNDKLYGVITDHEGS 2642


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,903
Number of Sequences: 2352
Number of extensions: 12279
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)