Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-2111
(650 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 36 8e-04
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 36 8e-04
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 36 8e-04
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 33 0.008
AY070254-1|AAL59653.1| 225|Anopheles gambiae glutathione S-tran... 24 3.6
AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein... 24 4.8
U89803-1|AAD03794.1| 250|Anopheles gambiae Tc1-like transposase... 23 6.3
DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific do... 23 6.3
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 6.3
AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 23 6.3
AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 23 6.3
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 36.3 bits (80), Expect = 8e-04
Identities = 37/107 (34%), Positives = 46/107 (42%)
Frame = +1
Query: 19 PSIVGKAPPSXA*WXGYXDKKDSYVGDXAQSKKXVS*PSXXXXXXXXXXXXGDDMGEDFX 198
PSIVG+ P G +KDSYVGD AQSK+ + + DDM E
Sbjct: 33 PSIVGR-PRHQGVMVGMG-QKDSYVGDEAQSKRGIL--TLKYPIEHGIVTNWDDM-EKIW 87
Query: 199 IIPSTMRLRVGPPRNTQFLLX*GXPSTPKGQQRER*PRIMFPNISTP 339
LRV P + L P PK RE+ +IMF +TP
Sbjct: 88 HHTFYNELRVAPEEHPVLLTE--APLNPKA-NREKMTQIMFETFNTP 131
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 36.3 bits (80), Expect = 8e-04
Identities = 37/107 (34%), Positives = 46/107 (42%)
Frame = +1
Query: 19 PSIVGKAPPSXA*WXGYXDKKDSYVGDXAQSKKXVS*PSXXXXXXXXXXXXGDDMGEDFX 198
PSIVG+ P G +KDSYVGD AQSK+ + + DDM E
Sbjct: 33 PSIVGR-PRHQGVMVGMG-QKDSYVGDEAQSKRGIL--TLKYPIEHGIVTNWDDM-EKIW 87
Query: 199 IIPSTMRLRVGPPRNTQFLLX*GXPSTPKGQQRER*PRIMFPNISTP 339
LRV P + L P PK RE+ +IMF +TP
Sbjct: 88 HHTFYNELRVAPEEHPVLLTE--APLNPKA-NREKMTQIMFETFNTP 131
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 36.3 bits (80), Expect = 8e-04
Identities = 37/107 (34%), Positives = 46/107 (42%)
Frame = +1
Query: 19 PSIVGKAPPSXA*WXGYXDKKDSYVGDXAQSKKXVS*PSXXXXXXXXXXXXGDDMGEDFX 198
PSIVG+ P G +KDSYVGD AQSK+ + + DDM E
Sbjct: 33 PSIVGR-PRHQGVMVGMG-QKDSYVGDEAQSKRGIL--TLKYPIEHGIVTNWDDM-EKIW 87
Query: 199 IIPSTMRLRVGPPRNTQFLLX*GXPSTPKGQQRER*PRIMFPNISTP 339
LRV P + L P PK RE+ +IMF +TP
Sbjct: 88 HHTFYNELRVAPEEHPVLLTE--APLNPKA-NREKMTQIMFETFNTP 131
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 33.1 bits (72), Expect = 0.008
Identities = 35/107 (32%), Positives = 45/107 (42%)
Frame = +1
Query: 19 PSIVGKAPPSXA*WXGYXDKKDSYVGDXAQSKKXVS*PSXXXXXXXXXXXXGDDMGEDFX 198
PSIVG+ P G +K D+YVGD AQSK+ + + DDM E
Sbjct: 33 PSIVGR-PRHQGVMVGMGNK-DAYVGDEAQSKRGIL--TLKYPIEHGIITNWDDM-EKIW 87
Query: 199 IIPSTMRLRVGPPRNTQFLLX*GXPSTPKGQQRER*PRIMFPNISTP 339
LRV P + L P PK RE+ +IMF + P
Sbjct: 88 HHTFYNELRVAPEEHPVLLTE--APLNPK-SNREKMTQIMFETFAAP 131
>AY070254-1|AAL59653.1| 225|Anopheles gambiae glutathione
S-transferase E4 protein.
Length = 225
Score = 24.2 bits (50), Expect = 3.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 9 AVFPLDRGKGPAIXGVMGRV 68
A+FP+D GK P + G + R+
Sbjct: 173 AIFPIDAGKYPRLAGWVKRL 192
>AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 695
Score = 23.8 bits (49), Expect = 4.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 382 CTPXRSYHXVSXLGLPA 432
CTP YH + G+PA
Sbjct: 285 CTPKLKYHYLMGYGIPA 301
>U89803-1|AAD03794.1| 250|Anopheles gambiae Tc1-like transposase
protein.
Length = 250
Score = 23.4 bits (48), Expect = 6.3
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 305 DPESCFQTFQH 337
DP+ CF+TF+H
Sbjct: 88 DPKYCFKTFKH 98
>DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific
doublesex protein protein.
Length = 265
Score = 23.4 bits (48), Expect = 6.3
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2
Query: 125 PDPQIPXFEHGIVTKLGMTWEKIXXLYLL 211
PD ++ ++ KLG WE + +Y++
Sbjct: 190 PDDELVKRAQWLLEKLGYPWEMMPLMYVI 218
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 23.4 bits (48), Expect = 6.3
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2
Query: 125 PDPQIPXFEHGIVTKLGMTWEKIXXLYLL 211
PD ++ ++ KLG WE + +Y++
Sbjct: 190 PDDELVKRAQWLLEKLGYPWEMMPLMYVI 218
>AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific
doublesex protein protein.
Length = 241
Score = 23.4 bits (48), Expect = 6.3
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2
Query: 125 PDPQIPXFEHGIVTKLGMTWEKIXXLYLL 211
PD ++ ++ KLG WE + +Y++
Sbjct: 166 PDDELVKRAQWLLEKLGYPWEMMPLMYVI 194
>AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific
doublesex protein protein.
Length = 283
Score = 23.4 bits (48), Expect = 6.3
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2
Query: 125 PDPQIPXFEHGIVTKLGMTWEKIXXLYLL 211
PD ++ ++ KLG WE + +Y++
Sbjct: 166 PDDELVKRAQWLLEKLGYPWEMMPLMYVI 194
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,548
Number of Sequences: 2352
Number of extensions: 10782
Number of successful extensions: 30
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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