Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-2109
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    25   0.33 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   0.76 
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    24   0.76 
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    24   1.0  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.8  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    23   1.8  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    23   1.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.8  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   3.1  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   3.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.1  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   5.4  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    21   5.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.1  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 25.4 bits (53), Expect = 0.33
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 103 AIHHVLQGRKXPPLPGSPKSETGSSGPRR 189
           A++H LQ R  P  P  PK   G   P+R
Sbjct: 50  ALYHKLQFRGPPRTPLQPKLVAGKLKPKR 78


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = +2

Query: 407 PAXSSGTKGNDPRAXQQFXGVKKAXPPFLAXVPSPDGQKKAGXGPK 544
           P  SSG+  +  ++ +    V+ A    +A +PSP   +++   P+
Sbjct: 378 PITSSGSTDSSSQSVEDPQQVEAAIVHLIANLPSPGSDQRSTPSPR 423


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 140 LYPDPQKVKPVHLDPED 190
           +YPDP+K  P    PE+
Sbjct: 117 IYPDPEKFDPERFRPEN 133


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 140 LYPDPQKVKPVHLDPED 190
           +YPDP+K+ P    PE+
Sbjct: 100 IYPDPEKLDPDRFLPEN 116


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 140 LYPDPQKVKPVHLDPED 190
           +YPDP+K  P    PE+
Sbjct: 416 IYPDPEKFDPDRFLPEN 432


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 113 MYYRGERXHLYPDPQKVKPVHLDPED 190
           +Y       +YPDP+K  P    PE+
Sbjct: 90  IYDMHHNPQVYPDPEKFDPDRFLPEN 115


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 140 LYPDPQKVKPVHLDPED 190
           +YPDP+K  P    PE+
Sbjct: 100 IYPDPEKFDPDRFLPEN 116


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 140 LYPDPQKVKPVHLDPED 190
           +YPDP+K  P    PE+
Sbjct: 416 IYPDPEKFDPDRFLPEN 432


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 143 YPDPQKVKPVHLDPEDQASSV 205
           +PDP+K  P     E++A  V
Sbjct: 390 FPDPEKFDPERFSDENKAKIV 410


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 143 YPDPQKVKPVHLDPEDQA 196
           +P+P+K  P    PE+QA
Sbjct: 99  FPEPEKFDPNRYLPENQA 116


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 113 MYYRGERXHLYPDPQKVKPVHLDPED 190
           +Y      +++PDP+K  P    PE+
Sbjct: 391 IYDMHHNPNVFPDPEKFDPDRFLPEN 416


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 113 MYYRGERXHLYPDPQKVKPVHLDPED 190
           +Y      +++PDP+K  P    PE+
Sbjct: 391 IYDMHHNPNVFPDPEKFDPDRFLPEN 416


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 143 YPDPQKVKPVHLDPEDQ 193
           YPDP+K  P     E++
Sbjct: 403 YPDPEKYDPERFSDENK 419


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 140 LYPDPQKVKPVHLDPED 190
           +YP+P+K  P    PE+
Sbjct: 100 IYPEPEKFDPDRFLPEN 116


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 139 PLPGSPKSETGSSGPRRPGQFCGXTGS 219
           P+P +P    GS G       CG +G+
Sbjct: 207 PVPSTPYPPPGSLGSMGVSVPCGTSGN 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,223
Number of Sequences: 336
Number of extensions: 2325
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)